{"id":"https://openalex.org/W4388934405","doi":"https://doi.org/10.1016/j.jbi.2023.104551","title":"Towards a framework for interoperability and reproducibility of predictive models","display_name":"Towards a framework for interoperability and reproducibility of predictive models","publication_year":2023,"publication_date":"2023-11-23","ids":{"openalex":"https://openalex.org/W4388934405","doi":"https://doi.org/10.1016/j.jbi.2023.104551","pmid":"https://pubmed.ncbi.nlm.nih.gov/38000765"},"language":"en","primary_location":{"id":"doi:10.1016/j.jbi.2023.104551","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.jbi.2023.104551","pdf_url":null,"source":{"id":"https://openalex.org/S11622463","display_name":"Journal of Biomedical Informatics","issn_l":"1532-0464","issn":["1532-0464","1532-0480"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1016/j.jbi.2023.104551","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5058633820","display_name":"A. Rahrooh","orcid":"https://orcid.org/0000-0003-1451-6940"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]},{"id":"https://openalex.org/I2801403999","display_name":"UCLA Medical Center","ror":"https://ror.org/04vq5kb54","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2799798094","https://openalex.org/I2801403999"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Al Rahrooh","raw_affiliation_strings":["Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA. Electronic address: arahrooh@ucla.edu","Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA"],"raw_orcid":"https://orcid.org/0000-0003-1451-6940","affiliations":[{"raw_affiliation_string":"Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA. Electronic address: arahrooh@ucla.edu","institution_ids":["https://openalex.org/I2801403999"]},{"raw_affiliation_string":"Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029951140","display_name":"Anders O. Garlid","orcid":"https://orcid.org/0000-0002-1665-678X"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anders O. Garlid","raw_affiliation_strings":["Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA"],"raw_orcid":"https://orcid.org/0000-0002-1665-678X","affiliations":[{"raw_affiliation_string":"Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077034642","display_name":"Kelly Bartlett","orcid":"https://orcid.org/0000-0001-6672-7702"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kelly Bartlett","raw_affiliation_strings":["Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA"],"raw_orcid":"https://orcid.org/0000-0001-6672-7702","affiliations":[{"raw_affiliation_string":"Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093323401","display_name":"Warren R. Coons","orcid":null},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Warren Coons","raw_affiliation_strings":["Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029948058","display_name":"Panayiotis Petousis","orcid":"https://orcid.org/0000-0002-0696-608X"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]},{"id":"https://openalex.org/I4210110520","display_name":"Southern California Clinical and Translational Science Institute","ror":"https://ror.org/01ncqna34","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210110520"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Panayiotis Petousis","raw_affiliation_strings":["Clinical and Translational Science Institute (CTSI), University of California Los Angeles (UCLA), Los Angeles, CA, USA"],"raw_orcid":"https://orcid.org/0000-0002-0696-608X","affiliations":[{"raw_affiliation_string":"Clinical and Translational Science Institute (CTSI), University of California Los Angeles (UCLA), Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765","https://openalex.org/I4210110520"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016291944","display_name":"William Hsu","orcid":"https://orcid.org/0000-0002-5168-070X"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William Hsu","raw_affiliation_strings":["Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA"],"raw_orcid":"https://orcid.org/0000-0002-5168-070X","affiliations":[{"raw_affiliation_string":"Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056478657","display_name":"Alex Bui","orcid":"https://orcid.org/0000-0002-4702-1373"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]},{"id":"https://openalex.org/I4210110520","display_name":"Southern California Clinical and Translational Science Institute","ror":"https://ror.org/01ncqna34","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210110520"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alex A.T. Bui","raw_affiliation_strings":["Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA; Clinical and Translational Science Institute (CTSI), University of California Los Angeles (UCLA), Los Angeles, CA, USA","Clinical and Translational Science Institute (CTSI), University of California Los Angeles (UCLA), Los Angeles, CA, USA","Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA; Clinical and Translational Science Institute (CTSI), University of California Los Angeles (UCLA), Los Angeles, CA, USA","institution_ids":["https://openalex.org/I4210110520"]},{"raw_affiliation_string":"Clinical and Translational Science Institute (CTSI), University of California Los Angeles (UCLA), Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765","https://openalex.org/I4210110520"]},{"raw_affiliation_string":"Medical & Imaging Informatics (MII) Group, University of California Los Angeles (UCLA), Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":2980,"currency":"USD","value_usd":2980},"apc_paid":{"value":2980,"currency":"USD","value_usd":2980},"fwci":3.4677,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.93875983,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":98},"biblio":{"volume":"149","issue":null,"first_page":"104551","last_page":"104551"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T12026","display_name":"Explainable Artificial Intelligence (XAI)","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11636","display_name":"Artificial Intelligence in Healthcare and Education","score":0.9879000186920166,"subfield":{"id":"https://openalex.org/subfields/2718","display_name":"Health Informatics"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7797799110412598},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.6423811912536621},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.6018271446228027},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.46335744857788086},{"id":"https://openalex.org/keywords/blueprint","display_name":"Blueprint","score":0.4627513885498047},{"id":"https://openalex.org/keywords/generalizability-theory","display_name":"Generalizability theory","score":0.4542239010334015},{"id":"https://openalex.org/keywords/replication","display_name":"Replication (statistics)","score":0.423906534910202},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4231165051460266},{"id":"https://openalex.org/keywords/software-deployment","display_name":"Software deployment","score":0.41612708568573},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4085763096809387},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.39363083243370056},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.34116652607917786},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.10873919725418091},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.10652366280555725},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.10463428497314453}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7797799110412598},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.6423811912536621},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.6018271446228027},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.46335744857788086},{"id":"https://openalex.org/C155911762","wikidata":"https://www.wikidata.org/wiki/Q422321","display_name":"Blueprint","level":2,"score":0.4627513885498047},{"id":"https://openalex.org/C27158222","wikidata":"https://www.wikidata.org/wiki/Q5532422","display_name":"Generalizability theory","level":2,"score":0.4542239010334015},{"id":"https://openalex.org/C12590798","wikidata":"https://www.wikidata.org/wiki/Q3933199","display_name":"Replication (statistics)","level":2,"score":0.423906534910202},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4231165051460266},{"id":"https://openalex.org/C105339364","wikidata":"https://www.wikidata.org/wiki/Q2297740","display_name":"Software deployment","level":2,"score":0.41612708568573},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4085763096809387},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.39363083243370056},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.34116652607917786},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.10873919725418091},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.10652366280555725},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.10463428497314453},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011996","descriptor_name":"Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011996","descriptor_name":"Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011996","descriptor_name":"Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011996","descriptor_name":"Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.jbi.2023.104551","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.jbi.2023.104551","pdf_url":null,"source":{"id":"https://openalex.org/S11622463","display_name":"Journal of Biomedical Informatics","issn_l":"1532-0464","issn":["1532-0464","1532-0480"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Informatics","raw_type":"journal-article"},{"id":"pmid:38000765","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38000765","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical informatics","raw_type":null}],"best_oa_location":{"id":"doi:10.1016/j.jbi.2023.104551","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.jbi.2023.104551","pdf_url":null,"source":{"id":"https://openalex.org/S11622463","display_name":"Journal of Biomedical Informatics","issn_l":"1532-0464","issn":["1532-0464","1532-0480"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Informatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1955634364","display_name":null,"funder_award_id":"R01 EB027650","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G241196917","display_name":null,"funder_award_id":"T32-EB016640","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337363","display_name":"National Institute of Biomedical Imaging and Bioengineering","ror":"https://ror.org/00372qc85"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W1998392635","https://openalex.org/W2012944782","https://openalex.org/W2019694480","https://openalex.org/W2062800332","https://openalex.org/W2101234009","https://openalex.org/W2118183099","https://openalex.org/W2130126144","https://openalex.org/W2302501749","https://openalex.org/W2317648909","https://openalex.org/W2787225861","https://openalex.org/W2887382745","https://openalex.org/W2910705748","https://openalex.org/W2927351257","https://openalex.org/W2962862931","https://openalex.org/W2969628488","https://openalex.org/W2988347076","https://openalex.org/W2994019181","https://openalex.org/W3008058947","https://openalex.org/W3012895958","https://openalex.org/W3024722698","https://openalex.org/W3037405958","https://openalex.org/W3083804794","https://openalex.org/W3092775028","https://openalex.org/W3127066701","https://openalex.org/W3127157950","https://openalex.org/W3134632303","https://openalex.org/W3163849331","https://openalex.org/W4281742620","https://openalex.org/W4285504770","https://openalex.org/W4308796844","https://openalex.org/W4308806601","https://openalex.org/W4311668966","https://openalex.org/W4321428130","https://openalex.org/W6675354045","https://openalex.org/W6748771796","https://openalex.org/W6846395551"],"related_works":["https://openalex.org/W2118717649","https://openalex.org/W410723623","https://openalex.org/W2413243053","https://openalex.org/W2015341305","https://openalex.org/W4225593417","https://openalex.org/W2035068594","https://openalex.org/W2059783833","https://openalex.org/W2573498121","https://openalex.org/W3160494304","https://openalex.org/W1549477351"],"abstract_inverted_index":{"The":[0,156,288],"development":[1,157],"and":[2,12,48,54,59,91,126,141,153,158,168,180,216,240,270,285,298,308,314],"deployment":[3,159],"of":[4,41,86,105,160,177,210,249,300,316],"machine":[5,161],"learning":[6,162],"(ML)":[7,163],"models":[8,37,164,206,318],"for":[9,20,38,103,124,147,165,191,207,247,268,294],"biomedical":[10,166],"research":[11,167],"healthcare":[13,169],"currently":[14,170],"lacks":[15],"standard":[16,172],"methodologies.":[17],"Although":[18,186],"tools":[19,190],"model":[21,110,122,150,192,254,266,304,311],"replication":[22],"are":[23,61,188,218],"numerous,":[24],"without":[25,194],"a":[26,83,106,145,195,250,292,301],"unifying":[27,196],"blueprint":[28],"it":[29,198],"remains":[30,199],"difficult":[31,200],"to":[32,78,175,201,236],"scientifically":[33,202],"reproduce":[34,203],"predictive":[35,108,149,204,252,310,317],"ML":[36,109,139,205,253,283,303],"any":[39,208],"number":[40,209],"reasons":[42],"(e.g.,":[43],"assumptions":[44],"regarding":[45],"data":[46],"distributions":[47],"preprocessing,":[49],"unclear":[50],"test":[51,134,278],"metrics,":[52],"etc.)":[53],"ultimately,":[55,309],"questions":[56,213],"around":[57,214],"generalizability":[58,215],"transportability":[60,217],"not":[62,219],"readily":[63,220],"answered.":[64,221],"To":[65],"facilitate":[66],"scientific":[67,178],"reproducibility,":[68,151,312],"we":[69,96],"built":[70],"upon":[71,229],"the":[72,87,98,230,242,296],"Predictive":[73,231],"Model":[74,89,232],"Markup":[75,233],"Language":[76,234],"(PMML)":[77,235],"capture":[79,237],"essential":[80,238],"information.":[81],"As":[82],"key":[84],"component":[85],"PREdictive":[88],"Index":[90],"Exchange":[92],"REpository":[93],"(PREMIERE)":[94],"platform,":[95],"present":[97],"Automated":[99,243],"Metadata":[100,244],"Pipeline":[101,245],"(AMP)":[102,246],"conversion":[104,248],"given":[107,251],"into":[111,255],"an":[112,118,256,262],"extended":[113,257],"PMML":[114,258],"file":[115,259],"that":[116,260],"autocompletes":[117],"ML-based":[119,263],"checklist,":[120,264,305],"assessing":[121,265],"elements":[123,267],"interoperability":[125,269],"reproducibility.":[127,271],"We":[128,272],"demonstrate":[129,273],"this":[130,223,274],"pipeline":[131,275],"on":[132,276],"multiple":[133,277],"cases":[135,279],"with":[136,280],"three":[137,281],"different":[138,282],"algorithms":[140,284],"health-related":[142,286],"datasets,":[143],"providing":[144],"foundation":[146],"future":[148],"sharing,":[152,313],"comparison.":[154],"Problem:":[155],"lack":[171],"methodologies,":[173],"leading":[174],"problems":[176],"reproducibility":[179],"interoperability.":[181],"What":[182,222],"is":[183,324],"Already":[184],"Known:":[185],"there":[187],"many":[189],"replication,":[193],"blueprint,":[197],"reasons.":[211],"Moreover,":[212],"Paper":[224],"Adds:":[225],"This":[226],"study":[227],"builds":[228],"information":[239,323],"presents":[241],"auto-completes":[261],"datasets.":[287],"proposed":[289],"AMP":[290],"provides":[291],"framework":[293],"automating":[295],"completion":[297],"evaluation":[299],"comprehensive":[302],"increasing":[306],"compliance":[307],"comparison":[315],"by":[319],"ensuring":[320],"all":[321],"appropriate":[322],"available.":[325]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":4}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
