{"id":"https://openalex.org/W4414272941","doi":"https://doi.org/10.1016/j.engappai.2025.112302","title":"Cyclic translations between pathomics and genomics improve automatic cancer diagnosis from whole slide images","display_name":"Cyclic translations between pathomics and genomics improve automatic cancer diagnosis from whole slide images","publication_year":2025,"publication_date":"2025-09-17","ids":{"openalex":"https://openalex.org/W4414272941","doi":"https://doi.org/10.1016/j.engappai.2025.112302"},"language":"en","primary_location":{"id":"doi:10.1016/j.engappai.2025.112302","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.engappai.2025.112302","pdf_url":null,"source":{"id":"https://openalex.org/S900972176","display_name":"Engineering Applications of Artificial Intelligence","issn_l":"0952-1976","issn":["0952-1976","1873-6769"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Engineering Applications of Artificial Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Xinyu Hao","orcid":"https://orcid.org/0009-0003-8134-1180"},"institutions":[{"id":"https://openalex.org/I157507598","display_name":"Shenyang University of Technology","ror":"https://ror.org/00d7f8730","country_code":"CN","type":"education","lineage":["https://openalex.org/I157507598"]},{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]},{"id":"https://openalex.org/I94722563","display_name":"University of Jyv\u00e4skyl\u00e4","ror":"https://ror.org/05n3dz165","country_code":"FI","type":"education","lineage":["https://openalex.org/I94722563"]}],"countries":["CN","FI"],"is_corresponding":false,"raw_author_name":"Xinyu Hao","raw_affiliation_strings":["Affiliated Cancer Hospital, Dalian University of Technology, Shenyang 110042, China","Faculty of Information Technology, University of Jyv\u00e4skyl\u00e4, Jyv\u00e4skyl\u00e4 40014, Finland","School of Biomedical Engineering, Faculty of Medicine, Dalian University of Technology, Dalian 116024, China"],"raw_orcid":"https://orcid.org/0009-0003-8134-1180","affiliations":[{"raw_affiliation_string":"Affiliated Cancer Hospital, Dalian University of Technology, Shenyang 110042, China","institution_ids":["https://openalex.org/I157507598","https://openalex.org/I27357992"]},{"raw_affiliation_string":"Faculty of Information Technology, University of Jyv\u00e4skyl\u00e4, Jyv\u00e4skyl\u00e4 40014, Finland","institution_ids":["https://openalex.org/I94722563"]},{"raw_affiliation_string":"School of Biomedical Engineering, Faculty of Medicine, Dalian University of Technology, Dalian 116024, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101554514","display_name":"Hongming Xu","orcid":"https://orcid.org/0000-0002-1305-0010"},"institutions":[{"id":"https://openalex.org/I157507598","display_name":"Shenyang University of Technology","ror":"https://ror.org/00d7f8730","country_code":"CN","type":"education","lineage":["https://openalex.org/I157507598"]},{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]},{"id":"https://openalex.org/I4210092944","display_name":"Dalian University","ror":"https://ror.org/00g2ypp58","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210092944"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Hongming Xu","raw_affiliation_strings":["Affiliated Cancer Hospital, Dalian University of Technology, Shenyang 110042, China","Key Laboratory of Integrated Circuit and Biomedical Electronic System, Dalian University of Technology, Liaoning Province, Dalian 116024, China","School of Biomedical Engineering, Faculty of Medicine, Dalian University of Technology, Dalian 116024, China"],"raw_orcid":"https://orcid.org/0000-0002-1305-0010","affiliations":[{"raw_affiliation_string":"Affiliated Cancer Hospital, Dalian University of Technology, Shenyang 110042, China","institution_ids":["https://openalex.org/I157507598","https://openalex.org/I27357992"]},{"raw_affiliation_string":"Key Laboratory of Integrated Circuit and Biomedical Electronic System, Dalian University of Technology, Liaoning Province, Dalian 116024, China","institution_ids":["https://openalex.org/I27357992","https://openalex.org/I4210092944"]},{"raw_affiliation_string":"School of Biomedical Engineering, Faculty of Medicine, Dalian University of Technology, Dalian 116024, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066976667","display_name":"XiaoFeng Wang","orcid":"https://orcid.org/0000-0002-0607-4946"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]},{"id":"https://openalex.org/I36373038","display_name":"Cleveland Clinic Lerner College of Medicine","ror":"https://ror.org/02x4b0932","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1316902750","https://openalex.org/I36373038"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Xiaofeng Wang","raw_affiliation_strings":["Department of Quantitative Health Sciences, Cleveland Clinic Lerner Research Institute, Cleveland 44195, USA","School of Biomedical Engineering, Faculty of Medicine, Dalian University of Technology, Dalian 116024, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Quantitative Health Sciences, Cleveland Clinic Lerner Research Institute, Cleveland 44195, USA","institution_ids":["https://openalex.org/I36373038"]},{"raw_affiliation_string":"School of Biomedical Engineering, Faculty of Medicine, Dalian University of Technology, Dalian 116024, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065409496","display_name":"Tong Wang","orcid":"https://orcid.org/0000-0002-8176-4808"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tong Wang","raw_affiliation_strings":["School of Biomedical Engineering, Faculty of Medicine, Dalian University of Technology, Dalian 116024, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Engineering, Faculty of Medicine, Dalian University of Technology, Dalian 116024, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102937415","display_name":"Timo D. H\u00e4m\u00e4l\u00e4inen","orcid":"https://orcid.org/0000-0002-7867-0800"},"institutions":[{"id":"https://openalex.org/I94722563","display_name":"University of Jyv\u00e4skyl\u00e4","ror":"https://ror.org/05n3dz165","country_code":"FI","type":"education","lineage":["https://openalex.org/I94722563"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Timo Hamalainen","raw_affiliation_strings":["Faculty of Information Technology, University of Jyv\u00e4skyl\u00e4, Jyv\u00e4skyl\u00e4 40014, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Information Technology, University of Jyv\u00e4skyl\u00e4, Jyv\u00e4skyl\u00e4 40014, Finland","institution_ids":["https://openalex.org/I94722563"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042937962","display_name":"Fengyu Cong","orcid":"https://orcid.org/0000-0003-0058-2429"},"institutions":[{"id":"https://openalex.org/I157507598","display_name":"Shenyang University of Technology","ror":"https://ror.org/00d7f8730","country_code":"CN","type":"education","lineage":["https://openalex.org/I157507598"]},{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]},{"id":"https://openalex.org/I4210092944","display_name":"Dalian University","ror":"https://ror.org/00g2ypp58","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210092944"]},{"id":"https://openalex.org/I94722563","display_name":"University of Jyv\u00e4skyl\u00e4","ror":"https://ror.org/05n3dz165","country_code":"FI","type":"education","lineage":["https://openalex.org/I94722563"]}],"countries":["CN","FI"],"is_corresponding":false,"raw_author_name":"Fengyu Cong","raw_affiliation_strings":["Affiliated Cancer Hospital, Dalian University of Technology, Shenyang 110042, China","Faculty of Information Technology, University of Jyv\u00e4skyl\u00e4, Jyv\u00e4skyl\u00e4 40014, Finland","Key Laboratory of Integrated Circuit and Biomedical Electronic System, Dalian University of Technology, Liaoning Province, Dalian 116024, China","School of Biomedical Engineering, Faculty of Medicine, Dalian University of Technology, Dalian 116024, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Affiliated Cancer Hospital, Dalian University of Technology, Shenyang 110042, China","institution_ids":["https://openalex.org/I157507598","https://openalex.org/I27357992"]},{"raw_affiliation_string":"Faculty of Information Technology, University of Jyv\u00e4skyl\u00e4, Jyv\u00e4skyl\u00e4 40014, Finland","institution_ids":["https://openalex.org/I94722563"]},{"raw_affiliation_string":"Key Laboratory of Integrated Circuit and Biomedical Electronic System, Dalian University of Technology, Liaoning Province, Dalian 116024, China","institution_ids":["https://openalex.org/I27357992","https://openalex.org/I4210092944"]},{"raw_affiliation_string":"School of Biomedical Engineering, Faculty of Medicine, Dalian University of Technology, Dalian 116024, China","institution_ids":["https://openalex.org/I27357992"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101554514"],"corresponding_institution_ids":["https://openalex.org/I157507598","https://openalex.org/I27357992","https://openalex.org/I4210092944"],"apc_list":{"value":3200,"currency":"USD","value_usd":3200},"apc_paid":null,"fwci":1.065,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.84191442,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":97},"biblio":{"volume":"161","issue":null,"first_page":"112302","last_page":"112302"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9642999768257141,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/subtyping","display_name":"Subtyping","score":0.6331999897956848},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5472999811172485},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4729999899864197},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4691999852657318},{"id":"https://openalex.org/keywords/digital-pathology","display_name":"Digital pathology","score":0.41510000824928284},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.36890000104904175},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.3682999908924103},{"id":"https://openalex.org/keywords/cancer-biomarkers","display_name":"Cancer biomarkers","score":0.3515999913215637},{"id":"https://openalex.org/keywords/autoencoder","display_name":"Autoencoder","score":0.3440999984741211}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8529000282287598},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6668999791145325},{"id":"https://openalex.org/C83852419","wikidata":"https://www.wikidata.org/wiki/Q2713292","display_name":"Subtyping","level":2,"score":0.6331999897956848},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5472999811172485},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4729999899864197},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4691999852657318},{"id":"https://openalex.org/C2777522853","wikidata":"https://www.wikidata.org/wiki/Q5276128","display_name":"Digital pathology","level":2,"score":0.41510000824928284},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.36890000104904175},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.3682999908924103},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.367000013589859},{"id":"https://openalex.org/C2777002142","wikidata":"https://www.wikidata.org/wiki/Q5031432","display_name":"Cancer biomarkers","level":3,"score":0.3515999913215637},{"id":"https://openalex.org/C101738243","wikidata":"https://www.wikidata.org/wiki/Q786435","display_name":"Autoencoder","level":3,"score":0.3440999984741211},{"id":"https://openalex.org/C118505674","wikidata":"https://www.wikidata.org/wiki/Q42586063","display_name":"Encoder","level":2,"score":0.33799999952316284},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.3366999924182892},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.3174000084400177},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.31200000643730164},{"id":"https://openalex.org/C83665646","wikidata":"https://www.wikidata.org/wiki/Q42139305","display_name":"Feature vector","level":2,"score":0.30649998784065247},{"id":"https://openalex.org/C124535831","wikidata":"https://www.wikidata.org/wiki/Q4915074","display_name":"Biomarker discovery","level":4,"score":0.29510000348091125},{"id":"https://openalex.org/C31601959","wikidata":"https://www.wikidata.org/wiki/Q931309","display_name":"Medical imaging","level":2,"score":0.2892000079154968},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.2721000015735626},{"id":"https://openalex.org/C163500349","wikidata":"https://www.wikidata.org/wiki/Q7281263","display_name":"Radiogenomics","level":3,"score":0.26330000162124634},{"id":"https://openalex.org/C75294576","wikidata":"https://www.wikidata.org/wiki/Q5165192","display_name":"Contextual image classification","level":3,"score":0.25839999318122864},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.2572999894618988},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.25200000405311584}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1016/j.engappai.2025.112302","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.engappai.2025.112302","pdf_url":null,"source":{"id":"https://openalex.org/S900972176","display_name":"Engineering Applications of Artificial Intelligence","issn_l":"0952-1976","issn":["0952-1976","1873-6769"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Engineering Applications of Artificial Intelligence","raw_type":"journal-article"},{"id":"pmh:oai:jyx.jyu.fi:123456789/107141","is_oa":false,"landing_page_url":"http://urn.fi/URN:NBN:fi:jyu-202512018956","pdf_url":null,"source":{"id":"https://openalex.org/S4306400563","display_name":"Jyv\u00e4skyl\u00e4 University Digital Archive (University of Jyv\u00e4skyl\u00e4)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I94722563","host_organization_name":"University of Jyv\u00e4skyl\u00e4","host_organization_lineage":["https://openalex.org/I94722563"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"research article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2969612008","display_name":null,"funder_award_id":"2024-MSLH-065","funder_id":"https://openalex.org/F4320323086","funder_display_name":"Natural Science Foundation of Liaoning Province"},{"id":"https://openalex.org/G3207099380","display_name":null,"funder_award_id":"DUT24YG201","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G4257255756","display_name":null,"funder_award_id":"202006060060","funder_id":"https://openalex.org/F4320322725","funder_display_name":"China Scholarship Council"},{"id":"https://openalex.org/G4598727597","display_name":null,"funder_award_id":"82102135","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8423972797","display_name":null,"funder_award_id":"DUT25Z2514","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322725","display_name":"China Scholarship Council","ror":"https://ror.org/04atp4p48"},{"id":"https://openalex.org/F4320323086","display_name":"Natural Science Foundation of Liaoning Province","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":51,"referenced_works":["https://openalex.org/W1539811621","https://openalex.org/W1902237438","https://openalex.org/W1999574084","https://openalex.org/W2069422280","https://openalex.org/W2125618744","https://openalex.org/W2130942839","https://openalex.org/W2145280166","https://openalex.org/W2318605753","https://openalex.org/W2346025119","https://openalex.org/W2496114304","https://openalex.org/W2791015340","https://openalex.org/W2962793481","https://openalex.org/W2963206679","https://openalex.org/W2974825848","https://openalex.org/W2997170948","https://openalex.org/W3018829521","https://openalex.org/W3044996171","https://openalex.org/W3045125794","https://openalex.org/W3080637587","https://openalex.org/W3094502228","https://openalex.org/W3118914438","https://openalex.org/W3133782060","https://openalex.org/W3135547872","https://openalex.org/W3146513507","https://openalex.org/W3176719058","https://openalex.org/W3177811843","https://openalex.org/W3190179454","https://openalex.org/W3201382058","https://openalex.org/W3205594709","https://openalex.org/W3211647829","https://openalex.org/W3214733388","https://openalex.org/W4205807230","https://openalex.org/W4226096476","https://openalex.org/W4281259269","https://openalex.org/W4281638089","https://openalex.org/W4281853941","https://openalex.org/W4306812666","https://openalex.org/W4312468136","https://openalex.org/W4312776869","https://openalex.org/W4313156423","https://openalex.org/W4323338544","https://openalex.org/W4353055921","https://openalex.org/W4362522547","https://openalex.org/W4378674294","https://openalex.org/W4385245566","https://openalex.org/W4386794373","https://openalex.org/W4392947521","https://openalex.org/W4392947532","https://openalex.org/W4401728026","https://openalex.org/W4402716046","https://openalex.org/W4402716098"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-08-28T12:50:07.497085","created_date":"2025-10-10T00:00:00"}
