{"id":"https://openalex.org/W4409879520","doi":"https://doi.org/10.1016/j.ecoinf.2025.103170","title":"Deep learning for automated coral reef monitoring a novel system based on YOLOv8 detection and DeepSORT tracking","display_name":"Deep learning for automated coral reef monitoring a novel system based on YOLOv8 detection and DeepSORT tracking","publication_year":2025,"publication_date":"2025-04-28","ids":{"openalex":"https://openalex.org/W4409879520","doi":"https://doi.org/10.1016/j.ecoinf.2025.103170"},"language":"en","primary_location":{"id":"doi:10.1016/j.ecoinf.2025.103170","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ecoinf.2025.103170","pdf_url":null,"source":{"id":"https://openalex.org/S195809937","display_name":"Ecological Informatics","issn_l":"1574-9541","issn":["1574-9541","1878-0512"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Ecological Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1016/j.ecoinf.2025.103170","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5107178006","display_name":"Ouassine Younes","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Younes Ouassine","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113103635","display_name":"Conruyt No\u00ebl","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"No\u00ebl Conruyt","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080857672","display_name":"Kayal Mohsen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mohsen Kayal","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Philippe A. Martin","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Philippe A. Martin","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107178007","display_name":"Bigot Lionel","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lionel Bigot","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107178008","display_name":"Vignes Lebbe Regine","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vignes Lebbe Regine","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Hajar Moussanif","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hajar Moussanif","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5082849926","display_name":"Jihad Zahir","orcid":"https://orcid.org/0000-0002-5344-8277"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jihad Zahir","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5107178006"],"corresponding_institution_ids":[],"apc_list":{"value":2510,"currency":"USD","value_usd":2510},"apc_paid":{"value":2510,"currency":"USD","value_usd":2510},"fwci":15.2298,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.99139074,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"89","issue":null,"first_page":"103170","last_page":"103170"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10341","display_name":"Coral and Marine Ecosystems Studies","score":0.9797999858856201,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10341","display_name":"Coral and Marine Ecosystems Studies","score":0.9797999858856201,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12697","display_name":"Water Quality Monitoring Technologies","score":0.9506999850273132,"subfield":{"id":"https://openalex.org/subfields/2312","display_name":"Water Science and Technology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10689","display_name":"Remote-Sensing Image Classification","score":0.9139000177383423,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/coral-reef","display_name":"Coral reef","score":0.7325826287269592},{"id":"https://openalex.org/keywords/reef","display_name":"Reef","score":0.5532559156417847},{"id":"https://openalex.org/keywords/coral","display_name":"Coral","score":0.5271772146224976},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5184875726699829},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.422863245010376},{"id":"https://openalex.org/keywords/remote-sensing","display_name":"Remote sensing","score":0.3364313244819641},{"id":"https://openalex.org/keywords/oceanography","display_name":"Oceanography","score":0.31061026453971863},{"id":"https://openalex.org/keywords/geology","display_name":"Geology","score":0.1910160779953003}],"concepts":[{"id":"https://openalex.org/C79367842","wikidata":"https://www.wikidata.org/wiki/Q11292","display_name":"Coral reef","level":2,"score":0.7325826287269592},{"id":"https://openalex.org/C77044568","wikidata":"https://www.wikidata.org/wiki/Q184358","display_name":"Reef","level":2,"score":0.5532559156417847},{"id":"https://openalex.org/C143020374","wikidata":"https://www.wikidata.org/wiki/Q2411228","display_name":"Coral","level":2,"score":0.5271772146224976},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5184875726699829},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.422863245010376},{"id":"https://openalex.org/C62649853","wikidata":"https://www.wikidata.org/wiki/Q199687","display_name":"Remote sensing","level":1,"score":0.3364313244819641},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.31061026453971863},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.1910160779953003}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1016/j.ecoinf.2025.103170","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ecoinf.2025.103170","pdf_url":null,"source":{"id":"https://openalex.org/S195809937","display_name":"Ecological Informatics","issn_l":"1574-9541","issn":["1574-9541","1878-0512"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Ecological Informatics","raw_type":"journal-article"},{"id":"pmh:oai:archimer.ifremer.fr:106312","is_oa":true,"landing_page_url":"https://archimer.ifremer.fr/doc/00951/106312/","pdf_url":"https://archimer.ifremer.fr/doc/00951/106312/119399.pdf","source":{"id":"https://openalex.org/S4306402610","display_name":"Archimer (Ifremer)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I154202486","host_organization_name":"Ifremer","host_organization_lineage":["https://openalex.org/I154202486"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Ecological Informatics (1574-9541) (Elsevier BV), 2025-11 , Vol. 89 , P. 103170 (13p.)","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:80a0cb824fe14065b3bed8a3c3bf46bc","is_oa":true,"landing_page_url":"https://doaj.org/article/80a0cb824fe14065b3bed8a3c3bf46bc","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Ecological Informatics, Vol 89, Iss , Pp 103170- (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1016/j.ecoinf.2025.103170","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.ecoinf.2025.103170","pdf_url":null,"source":{"id":"https://openalex.org/S195809937","display_name":"Ecological Informatics","issn_l":"1574-9541","issn":["1574-9541","1878-0512"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Ecological Informatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8399999737739563,"display_name":"Life below water","id":"https://metadata.un.org/sdg/14"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W1246286270","https://openalex.org/W2600075188","https://openalex.org/W2892284873","https://openalex.org/W2896442146","https://openalex.org/W2970028564","https://openalex.org/W3014286955","https://openalex.org/W3096824582","https://openalex.org/W3105508245","https://openalex.org/W3130098432","https://openalex.org/W3132120561","https://openalex.org/W3151899382","https://openalex.org/W3194564149","https://openalex.org/W3196261962","https://openalex.org/W3199321815","https://openalex.org/W3217445779","https://openalex.org/W4210257669","https://openalex.org/W4211190605","https://openalex.org/W4224319240","https://openalex.org/W4225159516","https://openalex.org/W4283832173","https://openalex.org/W4285197323","https://openalex.org/W4292553302","https://openalex.org/W4298148235","https://openalex.org/W4308444217","https://openalex.org/W4310480301","https://openalex.org/W4313572030","https://openalex.org/W4313623125","https://openalex.org/W4318481997","https://openalex.org/W4323323110","https://openalex.org/W4327676095","https://openalex.org/W4361767546","https://openalex.org/W4365513608","https://openalex.org/W4378528643","https://openalex.org/W4382059840","https://openalex.org/W4384132004","https://openalex.org/W4387031545","https://openalex.org/W4388408496","https://openalex.org/W4391176625","https://openalex.org/W4394007169","https://openalex.org/W4404075340","https://openalex.org/W4405286436","https://openalex.org/W6628973269","https://openalex.org/W6787909554","https://openalex.org/W6790649081","https://openalex.org/W6791530671","https://openalex.org/W6794888832","https://openalex.org/W6810660432"],"related_works":["https://openalex.org/W1981253168","https://openalex.org/W2105092152","https://openalex.org/W1467387222","https://openalex.org/W4206979530","https://openalex.org/W2012693525","https://openalex.org/W2018708029","https://openalex.org/W2155689721","https://openalex.org/W91196398","https://openalex.org/W2022319242","https://openalex.org/W4404703329"],"abstract_inverted_index":{"Coral":[0],"reefs":[1],"are":[2,24,43],"vital":[3],"for":[4,35],"biodiversity,":[5],"coastal":[6],"protection,":[7],"food":[8],"security,":[9],"and":[10,20,38,45,78,93,104,117,141,175,211],"tourism,":[11],"yet":[12],"they":[13],"face":[14,251],"severe":[15],"threats":[16],"from":[17,99,108,148,199,209],"anthropogenic":[18],"activities":[19],"climate":[21],"change,":[22],"which":[23],"leading":[25],"to":[26,76,155,192,221,242],"their":[27],"decline.":[28],"Effective":[29],"coral":[30,80,115],"reef":[31,202,228],"monitoring":[32,59,223],"is":[33],"essential":[34],"ecological":[36],"understanding":[37],"conservation,":[39],"but":[40],"traditional":[41,222],"methods":[42],"resource-intensive":[44],"rely":[46],"on":[47,153,158],"experts.":[48],"To":[49],"address":[50],"these":[51,246],"challenges,":[52],"we":[53],"present":[54],"an":[55,200],"automated,":[56],"deep":[57,232],"learning-based":[58],"system":[60,87,164],"that":[61],"integrates":[62],"YOLOv8,":[63],"a":[64,71,166,193,217],"state-of-the-art":[65],"object":[66,128],"detection":[67,129],"algorithm,":[68],"with":[69],"DeepSORT,":[70],"robust":[72],"multi-object":[73,182],"tracking":[74,163,183],"method,":[75],"identify":[77],"track":[79],"formations":[81],"in":[82,184,204,249],"underwater":[83,186],"video":[84,197],"footage.":[85],"Our":[86],"was":[88,123],"fine-tuned":[89],"using":[90,125],"two":[91],"curated":[92],"annotated":[94],"datasets:":[95],"AIMECORAL1":[96],"(580":[97],"images":[98,107],"the":[100,159,243,250],"Southwest":[101],"Indian":[102],"Ocean)":[103],"AIMECORAL2":[105],"(282":[106],"New":[109,205],"Caledonia,":[110,206],"Pacific":[111],"Ocean),":[112],"encompassing":[113],"diverse":[114],"species":[116],"environmental":[118,254],"conditions.":[119],"The":[120,162],"system's":[121],"performance":[122],"evaluated":[124],"established":[126],"metrics:":[127],"precision,":[130],"Multiple":[131,136],"Object":[132,137],"Tracking":[133,138],"Accuracy":[134],"(MOTA),":[135],"Precision":[139,146],"(MOTP),":[140],"Identity":[142],"F1":[143],"Score":[144],"(IDF1).":[145],"improved":[147],"59.9":[149],"%":[150,157],"(after":[151],"fine-tuning":[152],"AIMECORAL1)":[154],"84.7":[156],"combined":[160],"datasets.":[161],"achieved":[165],"MOTA":[167],"of":[168,172,177,245,252],"82.63":[169],"%,":[170,174,179],"MOTP":[171],"83.28":[173],"IDF1":[176],"70.76":[178],"demonstrating":[180],"reliable":[181],"complex":[185],"environments.":[187],"We":[188],"applied":[189],"our":[190,234],"framework":[191],"case":[194],"study":[195],"involving":[196],"transects":[198],"outer":[201],"site":[203],"comparing":[207],"data":[208,239],"2021":[210],"2022.":[212],"This":[213],"automated":[214],"solution":[215],"offers":[216],"scalable,":[218],"cost-effective":[219],"alternative":[220],"methods,":[224],"supporting":[225],"seamless,":[226],"large-scale":[227],"assessment.":[229],"By":[230],"leveraging":[231],"learning,":[233],"approach":[235],"enables":[236],"more":[237],"efficient":[238],"collection,":[240],"contributing":[241],"protection":[244],"vulnerable":[247],"ecosystems":[248],"increasing":[253],"pressures.":[255]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":3}],"updated_date":"2026-04-24T08:23:43.765630","created_date":"2025-04-29T00:00:00"}
