{"id":"https://openalex.org/W2952209560","doi":"https://doi.org/10.1016/j.compbiolchem.2018.03.009","title":"SpliceVec: Distributed feature representations for splice junction prediction","display_name":"SpliceVec: Distributed feature representations for splice junction prediction","publication_year":2018,"publication_date":"2018-03-18","ids":{"openalex":"https://openalex.org/W2952209560","doi":"https://doi.org/10.1016/j.compbiolchem.2018.03.009","mag":"2952209560","pmid":"https://pubmed.ncbi.nlm.nih.gov/29580738"},"language":"en","primary_location":{"id":"doi:10.1016/j.compbiolchem.2018.03.009","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiolchem.2018.03.009","pdf_url":null,"source":{"id":"https://openalex.org/S104924063","display_name":"Computational Biology and Chemistry","issn_l":"1476-9271","issn":["1476-9271","1476-928X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology and Chemistry","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067383615","display_name":"Aparajita Dutta","orcid":"https://orcid.org/0000-0003-4296-306X"},"institutions":[{"id":"https://openalex.org/I1317621060","display_name":"Indian Institute of Technology Guwahati","ror":"https://ror.org/0022nd079","country_code":"IN","type":"education","lineage":["https://openalex.org/I1317621060"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Aparajita Dutta","raw_affiliation_strings":["Department of CSE, Indian Institute of Technology, Guwahati, India. Electronic address: d.aparajita@iitg.ernet.in","Department of CSE, Indian Institute of Technology, Guwahati, India"],"affiliations":[{"raw_affiliation_string":"Department of CSE, Indian Institute of Technology, Guwahati, India. Electronic address: d.aparajita@iitg.ernet.in","institution_ids":[]},{"raw_affiliation_string":"Department of CSE, Indian Institute of Technology, Guwahati, India","institution_ids":["https://openalex.org/I1317621060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005161433","display_name":"Tushar Dubey","orcid":null},"institutions":[{"id":"https://openalex.org/I1317621060","display_name":"Indian Institute of Technology Guwahati","ror":"https://ror.org/0022nd079","country_code":"IN","type":"education","lineage":["https://openalex.org/I1317621060"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Tushar Dubey","raw_affiliation_strings":["Department of BSBE, Indian Institute of Technology, Guwahati, India. Electronic address: tdiitg@gmail.com","Department of BSBE, Indian Institute of Technology, Guwahati, India"],"affiliations":[{"raw_affiliation_string":"Department of BSBE, Indian Institute of Technology, Guwahati, India. Electronic address: tdiitg@gmail.com","institution_ids":[]},{"raw_affiliation_string":"Department of BSBE, Indian Institute of Technology, Guwahati, India","institution_ids":["https://openalex.org/I1317621060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088845051","display_name":"Kusum Singh","orcid":"https://orcid.org/0000-0002-7054-1553"},"institutions":[{"id":"https://openalex.org/I1317621060","display_name":"Indian Institute of Technology Guwahati","ror":"https://ror.org/0022nd079","country_code":"IN","type":"education","lineage":["https://openalex.org/I1317621060"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Kusum Kumari Singh","raw_affiliation_strings":["Department of BSBE, Indian Institute of Technology, Guwahati, India. Electronic address: kusumsingh@iitg.ac.in","Department of BSBE, Indian Institute of Technology, Guwahati, India"],"affiliations":[{"raw_affiliation_string":"Department of BSBE, Indian Institute of Technology, Guwahati, India. Electronic address: kusumsingh@iitg.ac.in","institution_ids":[]},{"raw_affiliation_string":"Department of BSBE, Indian Institute of Technology, Guwahati, India","institution_ids":["https://openalex.org/I1317621060"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040626471","display_name":"Ashish Anand","orcid":"https://orcid.org/0000-0002-0024-3358"},"institutions":[{"id":"https://openalex.org/I1317621060","display_name":"Indian Institute of Technology Guwahati","ror":"https://ror.org/0022nd079","country_code":"IN","type":"education","lineage":["https://openalex.org/I1317621060"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Ashish Anand","raw_affiliation_strings":["Department of CSE, Indian Institute of Technology, Guwahati, India. Electronic address: anand.ashish@iitg.ernet.in","Department of CSE, Indian Institute of Technology, Guwahati, India"],"affiliations":[{"raw_affiliation_string":"Department of CSE, Indian Institute of Technology, Guwahati, India. Electronic address: anand.ashish@iitg.ernet.in","institution_ids":[]},{"raw_affiliation_string":"Department of CSE, Indian Institute of Technology, Guwahati, India","institution_ids":["https://openalex.org/I1317621060"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5040626471"],"corresponding_institution_ids":["https://openalex.org/I1317621060"],"apc_list":{"value":2960,"currency":"USD","value_usd":2960},"apc_paid":null,"fwci":1.4926,"has_fulltext":false,"cited_by_count":29,"citation_normalized_percentile":{"value":0.83071488,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"74","issue":null,"first_page":"434","last_page":"441"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/splice","display_name":"splice","score":0.8224377036094666},{"id":"https://openalex.org/keywords/rna-splicing","display_name":"RNA splicing","score":0.6149530410766602},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6054887771606445},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5372915267944336},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5161932110786438},{"id":"https://openalex.org/keywords/feature-extraction","display_name":"Feature extraction","score":0.5090538859367371},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5020616054534912},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.48062366247177124},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4200159013271332},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.37596508860588074},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.34796369075775146},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.24436616897583008},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20534753799438477},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.19009217619895935},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.0892762839794159}],"concepts":[{"id":"https://openalex.org/C2780989783","wikidata":"https://www.wikidata.org/wiki/Q7578557","display_name":"splice","level":3,"score":0.8224377036094666},{"id":"https://openalex.org/C54458228","wikidata":"https://www.wikidata.org/wiki/Q237218","display_name":"RNA splicing","level":4,"score":0.6149530410766602},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6054887771606445},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5372915267944336},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5161932110786438},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.5090538859367371},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5020616054534912},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.48062366247177124},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4200159013271332},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.37596508860588074},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.34796369075775146},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.24436616897583008},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20534753799438477},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19009217619895935},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.0892762839794159},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D022821","descriptor_name":"RNA Splice Sites","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D022821","descriptor_name":"RNA Splice Sites","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D022821","descriptor_name":"RNA Splice Sites","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.compbiolchem.2018.03.009","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiolchem.2018.03.009","pdf_url":null,"source":{"id":"https://openalex.org/S104924063","display_name":"Computational Biology and Chemistry","issn_l":"1476-9271","issn":["1476-9271","1476-928X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology and Chemistry","raw_type":"journal-article"},{"id":"pmid:29580738","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29580738","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational biology and chemistry","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.4000000059604645}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322724","display_name":"Ministry of Education, India","ror":"https://ror.org/048xjjh50"},{"id":"https://openalex.org/F4320334771","display_name":"Science and Engineering Research Board","ror":"https://ror.org/03ffdsr55"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W168564468","https://openalex.org/W1498837053","https://openalex.org/W1501531009","https://openalex.org/W1522301498","https://openalex.org/W1532556888","https://openalex.org/W1614298861","https://openalex.org/W1841068694","https://openalex.org/W1970774008","https://openalex.org/W1978654848","https://openalex.org/W1999574084","https://openalex.org/W2014181394","https://openalex.org/W2022648323","https://openalex.org/W2056403897","https://openalex.org/W2056967728","https://openalex.org/W2063861171","https://openalex.org/W2073009894","https://openalex.org/W2085249706","https://openalex.org/W2095998476","https://openalex.org/W2096465161","https://openalex.org/W2097065948","https://openalex.org/W2103647350","https://openalex.org/W2106356212","https://openalex.org/W2110400205","https://openalex.org/W2122789575","https://openalex.org/W2123676422","https://openalex.org/W2131744502","https://openalex.org/W2142058533","https://openalex.org/W2155684118","https://openalex.org/W2165506911","https://openalex.org/W2178351989","https://openalex.org/W2187089797","https://openalex.org/W2271840356","https://openalex.org/W2508498860","https://openalex.org/W2579802335","https://openalex.org/W2582377823","https://openalex.org/W2588009473","https://openalex.org/W2950577311","https://openalex.org/W2964121744","https://openalex.org/W4247292500","https://openalex.org/W4299676335","https://openalex.org/W6606906144","https://openalex.org/W6629892048","https://openalex.org/W6638901225","https://openalex.org/W6679775712","https://openalex.org/W6733572554"],"related_works":["https://openalex.org/W2029220916","https://openalex.org/W2274928342","https://openalex.org/W4247092347","https://openalex.org/W1943031701","https://openalex.org/W3129862691","https://openalex.org/W1993348797","https://openalex.org/W3006402873","https://openalex.org/W2887346131","https://openalex.org/W2008832338","https://openalex.org/W2014791263"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":4}],"updated_date":"2026-03-05T09:29:38.588285","created_date":"2025-10-10T00:00:00"}
