{"id":"https://openalex.org/W2046029105","doi":"https://doi.org/10.1016/s1672-0229(07)60004-7","title":"Prediction of GPCR-G Protein Coupling Specificity Using Features of Sequences and Biological Functions","display_name":"Prediction of GPCR-G Protein Coupling Specificity Using Features of Sequences and Biological Functions","publication_year":2006,"publication_date":"2006-12-01","ids":{"openalex":"https://openalex.org/W2046029105","doi":"https://doi.org/10.1016/s1672-0229(07)60004-7","mag":"2046029105","pmid":"https://pubmed.ncbi.nlm.nih.gov/17531799"},"language":"en","primary_location":{"id":"doi:10.1016/s1672-0229(07)60004-7","is_oa":true,"landing_page_url":"https://doi.org/10.1016/s1672-0229(07)60004-7","pdf_url":null,"source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1016/s1672-0229(07)60004-7","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5105468299","display_name":"Toshihide Ono","orcid":null},"institutions":[{"id":"https://openalex.org/I114030911","display_name":"Otsuka (Japan)","ror":"https://ror.org/013k5y296","country_code":"JP","type":"company","lineage":["https://openalex.org/I114030911"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Toshihide Ono","raw_affiliation_strings":["Laboratory of Bioinformatics, Otsuka Pharmaceutical Co., Ltd. , Tokushima, Kawauchi-cho, 771-0192 , Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Bioinformatics, Otsuka Pharmaceutical Co., Ltd. , Tokushima, Kawauchi-cho, 771-0192 , Japan","institution_ids":["https://openalex.org/I114030911"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060732928","display_name":"Haretsugu Hishigaki","orcid":null},"institutions":[{"id":"https://openalex.org/I114030911","display_name":"Otsuka (Japan)","ror":"https://ror.org/013k5y296","country_code":"JP","type":"company","lineage":["https://openalex.org/I114030911"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Haretsugu Hishigaki","raw_affiliation_strings":["Laboratory of Bioinformatics, Otsuka Pharmaceutical Co., Ltd. , Tokushima, Kawauchi-cho, 771-0192 , Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Bioinformatics, Otsuka Pharmaceutical Co., Ltd. , Tokushima, Kawauchi-cho, 771-0192 , Japan","institution_ids":["https://openalex.org/I114030911"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5105468299"],"corresponding_institution_ids":["https://openalex.org/I114030911"],"apc_list":{"value":3650,"currency":"USD","value_usd":3650},"apc_paid":{"value":3650,"currency":"USD","value_usd":3650},"fwci":0.1271,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.49598632,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"4","issue":"4","first_page":"238","last_page":"244"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9904999732971191,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9894000291824341,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/g-protein-coupled-receptor","display_name":"G protein-coupled receptor","score":0.9554665684700012},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6294910311698914},{"id":"https://openalex.org/keywords/coupling","display_name":"Coupling (piping)","score":0.545528769493103},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.429398775100708},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4087572395801544},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.39969539642333984},{"id":"https://openalex.org/keywords/receptor","display_name":"Receptor","score":0.387955904006958},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3256503939628601},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.1778416931629181},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.12048184871673584}],"concepts":[{"id":"https://openalex.org/C135285700","wikidata":"https://www.wikidata.org/wiki/Q38173","display_name":"G protein-coupled receptor","level":3,"score":0.9554665684700012},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6294910311698914},{"id":"https://openalex.org/C131584629","wikidata":"https://www.wikidata.org/wiki/Q4308705","display_name":"Coupling (piping)","level":2,"score":0.545528769493103},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.429398775100708},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4087572395801544},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.39969539642333984},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.387955904006958},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3256503939628601},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.1778416931629181},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.12048184871673584},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019204","descriptor_name":"GTP-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019204","descriptor_name":"GTP-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019204","descriptor_name":"GTP-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D043562","descriptor_name":"Receptors, G-Protein-Coupled","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D043562","descriptor_name":"Receptors, G-Protein-Coupled","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D043562","descriptor_name":"Receptors, G-Protein-Coupled","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1016/s1672-0229(07)60004-7","is_oa":true,"landing_page_url":"https://doi.org/10.1016/s1672-0229(07)60004-7","pdf_url":null,"source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17531799","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17531799","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, proteomics & bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:4016450","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5054072","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1016/s1672-0229(07)60004-7","is_oa":true,"landing_page_url":"https://doi.org/10.1016/s1672-0229(07)60004-7","pdf_url":null,"source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.75,"display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1214546200","https://openalex.org/W1484670493","https://openalex.org/W1803342405","https://openalex.org/W1991570251","https://openalex.org/W1994086577","https://openalex.org/W1994954589","https://openalex.org/W2027764322","https://openalex.org/W2039727622","https://openalex.org/W2044716499","https://openalex.org/W2049633694","https://openalex.org/W2058536752","https://openalex.org/W2086829657","https://openalex.org/W2099393019","https://openalex.org/W2102803266","https://openalex.org/W2104086780","https://openalex.org/W2106093878","https://openalex.org/W2107580398","https://openalex.org/W2125055259","https://openalex.org/W2131385614","https://openalex.org/W2135587043","https://openalex.org/W2144080252","https://openalex.org/W2147404748","https://openalex.org/W2151831732","https://openalex.org/W2161000520","https://openalex.org/W2169415997","https://openalex.org/W2399402335","https://openalex.org/W2949108231","https://openalex.org/W4213060373","https://openalex.org/W6628147189","https://openalex.org/W6628903870","https://openalex.org/W6678449394","https://openalex.org/W6684796585"],"related_works":["https://openalex.org/W2609050007","https://openalex.org/W3011298851","https://openalex.org/W4224216382","https://openalex.org/W3195483439","https://openalex.org/W2444295418","https://openalex.org/W2169619547","https://openalex.org/W416861399","https://openalex.org/W1967231335","https://openalex.org/W1570378576","https://openalex.org/W1566559296"],"abstract_inverted_index":{"Understanding":[0],"the":[1,32,40,55,72,88,109],"coupling":[2,41,56,97,115],"specificity":[3,57],"between":[4,58],"G":[5,13,33,61],"protein-coupled":[6],"receptors":[7],"(GPCRs)":[8],"and":[9,31,60,80,105,117],"specific":[10],"classes":[11],"of":[12,20,39,43,102],"proteins":[14],"is":[15],"important":[16],"for":[17,53,112,121],"further":[18],"elucidation":[19],"receptor":[21],"functions":[22],"within":[23],"a":[24,50],"cell.":[25],"Increasing":[26],"information":[27],"on":[28],"GPCR":[29,68,123],"sequences":[30,69],"protein":[34,96,114],"family":[35],"would":[36],"facilitate":[37],"prediction":[38,84,110],"properties":[42],"GPCRs.":[44],"In":[45],"this":[46],"study,":[47],"we":[48],"describe":[49],"novel":[51],"approach":[52],"predicting":[54],"GPCRs":[59],"proteins.":[62],"This":[63],"method":[64],"uses":[65],"not":[66],"only":[67],"but":[70],"also":[71,118],"functional":[73],"knowledge":[74],"generated":[75],"by":[76,86],"natural":[77],"language":[78],"processing,":[79],"can":[81],"achieve":[82],"92.2%":[83],"accuracy":[85,111],"using":[87],"C4.5":[89],"algorithm.":[90],"Furthermore,":[91],"rules":[92],"related":[93],"to":[94],"GPCR-G":[95,113],"are":[98],"generated.":[99],"The":[100],"combination":[101],"sequence":[103],"analysis":[104],"text":[106],"mining":[107],"improves":[108],"specificity,":[116],"provides":[119],"clues":[120],"understanding":[122],"signaling.":[124]},"counts_by_year":[],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
