{"id":"https://openalex.org/W2050802973","doi":"https://doi.org/10.1016/s0304-3975(99)00324-2","title":"The complexity of multiple sequence alignment with SP-score that is a metric","display_name":"The complexity of multiple sequence alignment with SP-score that is a metric","publication_year":2001,"publication_date":"2001-05-01","ids":{"openalex":"https://openalex.org/W2050802973","doi":"https://doi.org/10.1016/s0304-3975(99)00324-2","mag":"2050802973"},"language":"en","primary_location":{"id":"doi:10.1016/s0304-3975(99)00324-2","is_oa":false,"landing_page_url":"https://doi.org/10.1016/s0304-3975(99)00324-2","pdf_url":null,"source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038691764","display_name":"Paola Bonizzoni","orcid":"https://orcid.org/0000-0001-7289-4988"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]},{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Paola Bonizzoni","raw_affiliation_strings":["Dipartimento di Informatica, Sistemistica e Comunicazione, Universit\u00e0 degli Studi di Milano-Bicocca, via Bicocca degli Arcimboldi 8, 20126 Milano, Italy","Dipartimento di Informatica Sistemistica e Comunicazione, Universita degli Studi di Milano, Bicocca, Via Bicocca degli Arcimboldi 8, 20126 Milano, Italy#TAB#"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Informatica, Sistemistica e Comunicazione, Universit\u00e0 degli Studi di Milano-Bicocca, via Bicocca degli Arcimboldi 8, 20126 Milano, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"Dipartimento di Informatica Sistemistica e Comunicazione, Universita degli Studi di Milano, Bicocca, Via Bicocca degli Arcimboldi 8, 20126 Milano, Italy#TAB#","institution_ids":["https://openalex.org/I189158943"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059679442","display_name":"Gianluca Della Vedova","orcid":"https://orcid.org/0000-0001-5584-3089"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]},{"id":"https://openalex.org/I66752286","display_name":"University of Milano-Bicocca","ror":"https://ror.org/01ynf4891","country_code":"IT","type":"education","lineage":["https://openalex.org/I66752286"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gianluca Della Vedova","raw_affiliation_strings":["Dipartimento di Informatica, Sistemistica e Comunicazione, Universit\u00e0 degli Studi di Milano-Bicocca, via Bicocca degli Arcimboldi 8, 20126 Milano, Italy","Dipartimento di Informatica Sistemistica e Comunicazione, Universita degli Studi di Milano, Bicocca, Via Bicocca degli Arcimboldi 8, 20126 Milano, Italy#TAB#"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Informatica, Sistemistica e Comunicazione, Universit\u00e0 degli Studi di Milano-Bicocca, via Bicocca degli Arcimboldi 8, 20126 Milano, Italy","institution_ids":["https://openalex.org/I66752286"]},{"raw_affiliation_string":"Dipartimento di Informatica Sistemistica e Comunicazione, Universita degli Studi di Milano, Bicocca, Via Bicocca degli Arcimboldi 8, 20126 Milano, Italy#TAB#","institution_ids":["https://openalex.org/I189158943"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5038691764"],"corresponding_institution_ids":["https://openalex.org/I189158943","https://openalex.org/I66752286"],"apc_list":{"value":2690,"currency":"USD","value_usd":2690},"apc_paid":null,"fwci":8.7219,"has_fulltext":false,"cited_by_count":106,"citation_normalized_percentile":{"value":0.97448779,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"259","issue":"1-2","first_page":"63","last_page":"79"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9839000105857849,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6999554634094238},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.6775067448616028},{"id":"https://openalex.org/keywords/alphabet","display_name":"Alphabet","score":0.6670955419540405},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.6039639711380005},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6038861870765686},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.5452783703804016},{"id":"https://openalex.org/keywords/binary-number","display_name":"Binary number","score":0.5219899415969849},{"id":"https://openalex.org/keywords/computational-complexity-theory","display_name":"Computational complexity theory","score":0.5069558620452881},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.46772634983062744},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4311752915382385},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.428432822227478},{"id":"https://openalex.org/keywords/pseudorandom-binary-sequence","display_name":"Pseudorandom binary sequence","score":0.4168907701969147},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.39924356341362},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3816293179988861},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3590880036354065},{"id":"https://openalex.org/keywords/arithmetic","display_name":"Arithmetic","score":0.12033864855766296},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09150314331054688}],"concepts":[{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6999554634094238},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.6775067448616028},{"id":"https://openalex.org/C112876837","wikidata":"https://www.wikidata.org/wiki/Q837518","display_name":"Alphabet","level":2,"score":0.6670955419540405},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.6039639711380005},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6038861870765686},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.5452783703804016},{"id":"https://openalex.org/C48372109","wikidata":"https://www.wikidata.org/wiki/Q3913","display_name":"Binary number","level":2,"score":0.5219899415969849},{"id":"https://openalex.org/C179799912","wikidata":"https://www.wikidata.org/wiki/Q205084","display_name":"Computational complexity theory","level":2,"score":0.5069558620452881},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.46772634983062744},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4311752915382385},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.428432822227478},{"id":"https://openalex.org/C128040838","wikidata":"https://www.wikidata.org/wiki/Q1810628","display_name":"Pseudorandom binary sequence","level":3,"score":0.4168907701969147},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.39924356341362},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3816293179988861},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3590880036354065},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.12033864855766296},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09150314331054688},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1016/s0304-3975(99)00324-2","is_oa":false,"landing_page_url":"https://doi.org/10.1016/s0304-3975(99)00324-2","pdf_url":null,"source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.16.4830","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.16.4830","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.statistica.unimib.it/utenti/dellavedova/papers/MSASPNPcomplete.ps.gz","raw_type":"text"},{"id":"pmh:oai:boa.unimib.it:10281/1282","is_oa":false,"landing_page_url":"http://hdl.handle.net/10281/1282","pdf_url":null,"source":{"id":"https://openalex.org/S4306401259","display_name":"BOA (University of Milano-Bicocca)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66752286","host_organization_name":"University of Milano-Bicocca","host_organization_lineage":["https://openalex.org/I66752286"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Quality Education","score":0.5199999809265137,"id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1974326986","https://openalex.org/W2002638840","https://openalex.org/W2011039300","https://openalex.org/W2035806546","https://openalex.org/W2038225707","https://openalex.org/W2051256134","https://openalex.org/W2084297478","https://openalex.org/W2093843227","https://openalex.org/W2143508105","https://openalex.org/W2268259797","https://openalex.org/W2418506210","https://openalex.org/W4210987016","https://openalex.org/W4255011371","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2051969447","https://openalex.org/W2111937814","https://openalex.org/W2162923930","https://openalex.org/W1482324242","https://openalex.org/W2133116680","https://openalex.org/W2029514038","https://openalex.org/W2149492307","https://openalex.org/W1985408726","https://openalex.org/W187239587","https://openalex.org/W2141411672"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":3}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}