{"id":"https://openalex.org/W2082317627","doi":"https://doi.org/10.1016/s0304-3975(01)00192-x","title":"Computing similarity between RNA structures","display_name":"Computing similarity between RNA structures","publication_year":2002,"publication_date":"2002-04-01","ids":{"openalex":"https://openalex.org/W2082317627","doi":"https://doi.org/10.1016/s0304-3975(01)00192-x","mag":"2082317627"},"language":"en","primary_location":{"id":"doi:10.1016/s0304-3975(01)00192-x","is_oa":false,"landing_page_url":"https://doi.org/10.1016/s0304-3975(01)00192-x","pdf_url":null,"source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100749729","display_name":"Bin Ma","orcid":"https://orcid.org/0000-0001-7649-6696"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bin Ma","raw_affiliation_strings":["Department of Mathematics, Peking University, Beijing 100871, People's Republic of China","Peking University Beijing, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics, Peking University, Beijing 100871, People's Republic of China","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"Peking University Beijing, People's Republic of China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065315257","display_name":"Lusheng Wang","orcid":"https://orcid.org/0000-0002-4344-8791"},"institutions":[{"id":"https://openalex.org/I168719708","display_name":"City University of Hong Kong","ror":"https://ror.org/03q8dnn23","country_code":"HK","type":"education","lineage":["https://openalex.org/I168719708"]}],"countries":["HK"],"is_corresponding":true,"raw_author_name":"Lusheng Wang","raw_affiliation_strings":["Department of Computer Science, City University of Hong Kong, 83 Tat Chee Avenue, Kowloon, Hong Kong","City University of Hong Kong, Kowloon"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, City University of Hong Kong, 83 Tat Chee Avenue, Kowloon, Hong Kong","institution_ids":["https://openalex.org/I168719708"]},{"raw_affiliation_string":"City University of Hong Kong, Kowloon","institution_ids":["https://openalex.org/I168719708"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081729547","display_name":"Kaizhong Zhang","orcid":"https://orcid.org/0000-0003-1734-5921"},"institutions":[{"id":"https://openalex.org/I125749732","display_name":"Western University","ror":"https://ror.org/02grkyz14","country_code":"CA","type":"education","lineage":["https://openalex.org/I125749732"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Kaizhong Zhang","raw_affiliation_strings":["Department of Computer Science, University of Western Ontario, London, Ont.Canada N6A 5B7","University of Western Ontario London ONT Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Western Ontario, London, Ont.Canada N6A 5B7","institution_ids":["https://openalex.org/I125749732"]},{"raw_affiliation_string":"University of Western Ontario London ONT Canada","institution_ids":["https://openalex.org/I125749732"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5065315257"],"corresponding_institution_ids":["https://openalex.org/I168719708"],"apc_list":{"value":2600,"currency":"USD","value_usd":2600},"apc_paid":null,"fwci":1.4221,"has_fulltext":false,"cited_by_count":60,"citation_normalized_percentile":{"value":0.80735361,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"276","issue":"1-2","first_page":"111","last_page":"132"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.6709172129631042},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.6326885223388672},{"id":"https://openalex.org/keywords/nucleic-acid-secondary-structure","display_name":"Nucleic acid secondary structure","score":0.5579984188079834},{"id":"https://openalex.org/keywords/protein-tertiary-structure","display_name":"Protein tertiary structure","score":0.5529532432556152},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5394760966300964},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.4914788007736206},{"id":"https://openalex.org/keywords/protein-secondary-structure","display_name":"Protein secondary structure","score":0.48722735047340393},{"id":"https://openalex.org/keywords/maximization","display_name":"Maximization","score":0.4560527503490448},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4516932964324951},{"id":"https://openalex.org/keywords/base-pair","display_name":"Base pair","score":0.45022696256637573},{"id":"https://openalex.org/keywords/time-complexity","display_name":"Time complexity","score":0.4402570426464081},{"id":"https://openalex.org/keywords/nucleic-acid-structure","display_name":"Nucleic acid structure","score":0.43472352623939514},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4298829734325409},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.33798089623451233},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.2730211615562439},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16446557641029358},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13891437649726868},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.12704843282699585},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.11006909608840942},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.08896031975746155}],"concepts":[{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.6709172129631042},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.6326885223388672},{"id":"https://openalex.org/C85468374","wikidata":"https://www.wikidata.org/wiki/Q6589957","display_name":"Nucleic acid secondary structure","level":4,"score":0.5579984188079834},{"id":"https://openalex.org/C75599170","wikidata":"https://www.wikidata.org/wiki/Q898483","display_name":"Protein tertiary structure","level":2,"score":0.5529532432556152},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5394760966300964},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.4914788007736206},{"id":"https://openalex.org/C62614982","wikidata":"https://www.wikidata.org/wiki/Q904984","display_name":"Protein secondary structure","level":2,"score":0.48722735047340393},{"id":"https://openalex.org/C2776330181","wikidata":"https://www.wikidata.org/wiki/Q18358244","display_name":"Maximization","level":2,"score":0.4560527503490448},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4516932964324951},{"id":"https://openalex.org/C185581394","wikidata":"https://www.wikidata.org/wiki/Q145911","display_name":"Base pair","level":3,"score":0.45022696256637573},{"id":"https://openalex.org/C311688","wikidata":"https://www.wikidata.org/wiki/Q2393193","display_name":"Time complexity","level":2,"score":0.4402570426464081},{"id":"https://openalex.org/C126142528","wikidata":"https://www.wikidata.org/wiki/Q3771876","display_name":"Nucleic acid structure","level":4,"score":0.43472352623939514},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4298829734325409},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.33798089623451233},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.2730211615562439},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16446557641029358},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13891437649726868},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.12704843282699585},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11006909608840942},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.08896031975746155},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1016/s0304-3975(01)00192-x","is_oa":false,"landing_page_url":"https://doi.org/10.1016/s0304-3975(01)00192-x","pdf_url":null,"source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1513047926","https://openalex.org/W1605903931","https://openalex.org/W1902180264","https://openalex.org/W1975009259","https://openalex.org/W1976373002","https://openalex.org/W1978036746","https://openalex.org/W2017313617","https://openalex.org/W2018414460","https://openalex.org/W2025763720","https://openalex.org/W2036916735","https://openalex.org/W2038225707","https://openalex.org/W2047715328","https://openalex.org/W2054698853","https://openalex.org/W2061158331","https://openalex.org/W2074231493","https://openalex.org/W2087064593","https://openalex.org/W2088528526","https://openalex.org/W2166991525","https://openalex.org/W4234667141","https://openalex.org/W6644867127","https://openalex.org/W6672261310"],"related_works":["https://openalex.org/W2059363535","https://openalex.org/W2037794263","https://openalex.org/W2119881887","https://openalex.org/W1978187259","https://openalex.org/W1998495298","https://openalex.org/W2150882008","https://openalex.org/W2177344418","https://openalex.org/W1988884185","https://openalex.org/W2063831899","https://openalex.org/W2412575231"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":3}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
