{"id":"https://openalex.org/W2056716266","doi":"https://doi.org/10.1016/s0167-8191(00)00092-2","title":"Identifying gene regulatory networks from experimental data","display_name":"Identifying gene regulatory networks from experimental data","publication_year":2001,"publication_date":"2001-01-01","ids":{"openalex":"https://openalex.org/W2056716266","doi":"https://doi.org/10.1016/s0167-8191(00)00092-2","mag":"2056716266"},"language":"en","primary_location":{"id":"doi:10.1016/s0167-8191(00)00092-2","is_oa":false,"landing_page_url":"https://doi.org/10.1016/s0167-8191(00)00092-2","pdf_url":null,"source":{"id":"https://openalex.org/S112708030","display_name":"Parallel Computing","issn_l":"0167-8191","issn":["0167-8191","1872-7336"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Parallel Computing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089256756","display_name":"Ting Chen","orcid":"https://orcid.org/0000-0002-5777-909X"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ting Chen","raw_affiliation_strings":["Department of Genetics, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA","Department of Genetics, Harvard Medical School, 200 Longwood Avenue, Boston MA 02115, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Genetics, Harvard Medical School, 200 Longwood Avenue, Boston MA 02115, USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064626129","display_name":"Vladimir Filkov","orcid":"https://orcid.org/0000-0003-0492-4393"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vladimir Filkov","raw_affiliation_strings":["Department of Computer Science, SUNY Stony Brook, Stony Brook, NY 11794-4400, USA","Department of Computer Science, SUNY Stony Brook, Stony Brook, NY 11794-4400, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, SUNY Stony Brook, Stony Brook, NY 11794-4400, USA","institution_ids":["https://openalex.org/I59553526"]},{"raw_affiliation_string":"Department of Computer Science, SUNY Stony Brook, Stony Brook, NY 11794-4400, USA#TAB#","institution_ids":["https://openalex.org/I59553526"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060741187","display_name":"Steven Skiena","orcid":"https://orcid.org/0000-0003-0397-7514"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steven S. Skiena","raw_affiliation_strings":["Department of Computer Science, SUNY Stony Brook, Stony Brook, NY 11794-4400, USA","Department of Computer Science, SUNY Stony Brook, Stony Brook, NY 11794-4400, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, SUNY Stony Brook, Stony Brook, NY 11794-4400, USA","institution_ids":["https://openalex.org/I59553526"]},{"raw_affiliation_string":"Department of Computer Science, SUNY Stony Brook, Stony Brook, NY 11794-4400, USA#TAB#","institution_ids":["https://openalex.org/I59553526"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5089256756"],"corresponding_institution_ids":["https://openalex.org/I136199984"],"apc_list":{"value":2680,"currency":"USD","value_usd":2680},"apc_paid":null,"fwci":1.7886,"has_fulltext":false,"cited_by_count":58,"citation_normalized_percentile":{"value":0.84506541,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"27","issue":"1-2","first_page":"141","last_page":"162"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.7002137899398804},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.6346501111984253},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5870997905731201},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5858277082443237},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5647664666175842},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5213688015937805},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.340321809053421},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33826369047164917},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3363766372203827},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.28282153606414795},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.242739737033844}],"concepts":[{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.7002137899398804},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.6346501111984253},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5870997905731201},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5858277082443237},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5647664666175842},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5213688015937805},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.340321809053421},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33826369047164917},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3363766372203827},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.28282153606414795},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.242739737033844},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1016/s0167-8191(00)00092-2","is_oa":false,"landing_page_url":"https://doi.org/10.1016/s0167-8191(00)00092-2","pdf_url":null,"source":{"id":"https://openalex.org/S112708030","display_name":"Parallel Computing","issn_l":"0167-8191","issn":["0167-8191","1872-7336"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Parallel Computing","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.46.2586","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.46.2586","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cs.sunysb.edu/~skiena/papers/genes.ps","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1481919380","https://openalex.org/W1666413479","https://openalex.org/W1798514331","https://openalex.org/W1971141362","https://openalex.org/W1971784203","https://openalex.org/W1985123706","https://openalex.org/W2003813631","https://openalex.org/W2004660767","https://openalex.org/W2011039300","https://openalex.org/W2036285035","https://openalex.org/W2082982706","https://openalex.org/W2130494035","https://openalex.org/W2133241531","https://openalex.org/W2142460132","https://openalex.org/W2165011536","https://openalex.org/W2172622297","https://openalex.org/W2319660501","https://openalex.org/W4247420482","https://openalex.org/W6604233986","https://openalex.org/W6637460831"],"related_works":["https://openalex.org/W2171277769","https://openalex.org/W2009966535","https://openalex.org/W2088063203","https://openalex.org/W2019988726","https://openalex.org/W2082530227","https://openalex.org/W4250154777","https://openalex.org/W2355215981","https://openalex.org/W2347219288","https://openalex.org/W2366221835","https://openalex.org/W2909382709"],"abstract_inverted_index":null,"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":3}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}