{"id":"https://openalex.org/W3191143847","doi":"https://doi.org/10.1016/j.tcs.2021.08.006","title":"RESCOT: Restriction enzyme set and combination optimization tools for rNMP capture techniques","display_name":"RESCOT: Restriction enzyme set and combination optimization tools for rNMP capture techniques","publication_year":2021,"publication_date":"2021-08-12","ids":{"openalex":"https://openalex.org/W3191143847","doi":"https://doi.org/10.1016/j.tcs.2021.08.006","mag":"3191143847","pmid":"https://pubmed.ncbi.nlm.nih.gov/34924677"},"language":"en","primary_location":{"id":"doi:10.1016/j.tcs.2021.08.006","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.tcs.2021.08.006","pdf_url":null,"source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8673908","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024771925","display_name":"Penghao Xu","orcid":"https://orcid.org/0000-0001-6760-144X"},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Penghao Xu","raw_affiliation_strings":["School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, 30332, USA"],"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, 30332, USA","institution_ids":["https://openalex.org/I130701444"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010290431","display_name":"Francesca Storici","orcid":"https://orcid.org/0000-0003-4640-3350"},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Francesca Storici","raw_affiliation_strings":["School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, 30332, USA"],"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, 30332, USA","institution_ids":["https://openalex.org/I130701444"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5010290431","https://openalex.org/A5024771925"],"corresponding_institution_ids":["https://openalex.org/I130701444"],"apc_list":{"value":2690,"currency":"USD","value_usd":2690},"apc_paid":null,"fwci":0.1609,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.48593634,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"894","issue":null,"first_page":"203","last_page":"213"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9925000071525574,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6309345364570618},{"id":"https://openalex.org/keywords/fragmentation","display_name":"Fragmentation (computing)","score":0.5766025185585022},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5640670657157898},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5069287419319153},{"id":"https://openalex.org/keywords/genome-instability","display_name":"Genome instability","score":0.5064233541488647},{"id":"https://openalex.org/keywords/restriction-enzyme","display_name":"Restriction enzyme","score":0.4874563217163086},{"id":"https://openalex.org/keywords/genomic-dna","display_name":"genomic DNA","score":0.4676593840122223},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4535263180732727},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.44674691557884216},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.3953137993812561},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.38932883739471436},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.33145672082901},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1281079351902008},{"id":"https://openalex.org/keywords/dna-damage","display_name":"DNA damage","score":0.06829607486724854}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6309345364570618},{"id":"https://openalex.org/C191015642","wikidata":"https://www.wikidata.org/wiki/Q1132459","display_name":"Fragmentation (computing)","level":2,"score":0.5766025185585022},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5640670657157898},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5069287419319153},{"id":"https://openalex.org/C178169997","wikidata":"https://www.wikidata.org/wiki/Q2892636","display_name":"Genome instability","level":4,"score":0.5064233541488647},{"id":"https://openalex.org/C128319531","wikidata":"https://www.wikidata.org/wiki/Q219715","display_name":"Restriction enzyme","level":3,"score":0.4874563217163086},{"id":"https://openalex.org/C17757408","wikidata":"https://www.wikidata.org/wiki/Q4135516","display_name":"genomic DNA","level":3,"score":0.4676593840122223},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4535263180732727},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.44674691557884216},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.3953137993812561},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.38932883739471436},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.33145672082901},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1281079351902008},{"id":"https://openalex.org/C143425029","wikidata":"https://www.wikidata.org/wiki/Q5205747","display_name":"DNA damage","level":3,"score":0.06829607486724854},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1016/j.tcs.2021.08.006","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.tcs.2021.08.006","pdf_url":null,"source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"},{"id":"pmid:34924677","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34924677","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical computer science","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8673908","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8673908","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Theor Comput Sci","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:8673908","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8673908","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Theor Comput Sci","raw_type":"Text"},"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.4300000071525574}],"awards":[{"id":"https://openalex.org/G1140161866","display_name":null,"funder_award_id":"R01 ES026243","funder_id":"https://openalex.org/F4320337361","funder_display_name":"National Institute of Environmental Health Sciences"}],"funders":[{"id":"https://openalex.org/F4320306082","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337361","display_name":"National Institute of Environmental Health Sciences","ror":"https://ror.org/00j4k1h63"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1970184264","https://openalex.org/W1991174820","https://openalex.org/W1992391204","https://openalex.org/W2001031455","https://openalex.org/W2066261076","https://openalex.org/W2071789354","https://openalex.org/W2101683500","https://openalex.org/W2112380324","https://openalex.org/W2204454331","https://openalex.org/W2340343617","https://openalex.org/W2623673637","https://openalex.org/W2765877939","https://openalex.org/W2889197496","https://openalex.org/W2894320187","https://openalex.org/W2966151060","https://openalex.org/W2971663935","https://openalex.org/W3025559395","https://openalex.org/W3080519006","https://openalex.org/W3082624462","https://openalex.org/W3113919055","https://openalex.org/W3160695391","https://openalex.org/W3165528122","https://openalex.org/W3201086941","https://openalex.org/W6788056533"],"related_works":["https://openalex.org/W2953814733","https://openalex.org/W2000439691","https://openalex.org/W2056369119","https://openalex.org/W1981667064","https://openalex.org/W1984825396","https://openalex.org/W4235840235","https://openalex.org/W2624467319","https://openalex.org/W2947638395","https://openalex.org/W1981587077","https://openalex.org/W2039251204"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
