{"id":"https://openalex.org/W7164563913","doi":"https://doi.org/10.1016/j.softx.2026.102801","title":"GaussianAPI: RESTful web service for fitting repulsive potentials in density-functional tight-binding with Gaussian process regression","display_name":"GaussianAPI: RESTful web service for fitting repulsive potentials in density-functional tight-binding with Gaussian process regression","publication_year":2026,"publication_date":"2026-06-12","ids":{"openalex":"https://openalex.org/W7164563913","doi":"https://doi.org/10.1016/j.softx.2026.102801"},"language":"en","primary_location":{"id":"doi:10.1016/j.softx.2026.102801","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.softx.2026.102801","pdf_url":null,"source":{"id":"https://openalex.org/S2506067282","display_name":"SoftwareX","issn_l":"2352-7110","issn":["2352-7110"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SoftwareX","raw_type":"journal-article"},"type":"software-paper","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1016/j.softx.2026.102801","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028296020","display_name":"Bojana Koteska","orcid":"https://orcid.org/0000-0001-6118-9044"},"institutions":[{"id":"https://openalex.org/I76245029","display_name":"Ss. Cyril and Methodius University in Skopje","ror":"https://ror.org/02wk2vx54","country_code":"MK","type":"education","lineage":["https://openalex.org/I76245029"]}],"countries":["MK"],"is_corresponding":true,"raw_author_name":"Bojana Koteska","raw_affiliation_strings":["Faculty of Computer Science and Engineering, Ss. Cyril and Methodius University, 1000 Skopje, North Macedonia"],"raw_orcid":"https://orcid.org/0000-0001-6118-9044","affiliations":[{"raw_affiliation_string":"Faculty of Computer Science and Engineering, Ss. Cyril and Methodius University, 1000 Skopje, North Macedonia","institution_ids":["https://openalex.org/I76245029"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027249453","display_name":"Anastas Mishev","orcid":"https://orcid.org/0000-0001-7271-6655"},"institutions":[{"id":"https://openalex.org/I76245029","display_name":"Ss. Cyril and Methodius University in Skopje","ror":"https://ror.org/02wk2vx54","country_code":"MK","type":"education","lineage":["https://openalex.org/I76245029"]}],"countries":["MK"],"is_corresponding":false,"raw_author_name":"Anastas Mishev","raw_affiliation_strings":["Faculty of Computer Science and Engineering, Ss. Cyril and Methodius University, 1000 Skopje, North Macedonia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer Science and Engineering, Ss. Cyril and Methodius University, 1000 Skopje, North Macedonia","institution_ids":["https://openalex.org/I76245029"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5138516835","display_name":"Ljupco Pejov","orcid":null},"institutions":[{"id":"https://openalex.org/I76245029","display_name":"Ss. Cyril and Methodius University in Skopje","ror":"https://ror.org/02wk2vx54","country_code":"MK","type":"education","lineage":["https://openalex.org/I76245029"]}],"countries":["MK"],"is_corresponding":false,"raw_author_name":"Ljupco Pejov","raw_affiliation_strings":["Faculty of Natural Science and Mathematics, Ss. Cyril and Methodius University, 1000 Skopje, North Macedonia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Natural Science and Mathematics, Ss. Cyril and Methodius University, 1000 Skopje, North Macedonia","institution_ids":["https://openalex.org/I76245029"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5028296020"],"corresponding_institution_ids":["https://openalex.org/I76245029"],"apc_list":{"value":760,"currency":"USD","value_usd":760},"apc_paid":{"value":760,"currency":"USD","value_usd":760},"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"35","issue":null,"first_page":"102801","last_page":"102801"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9702000021934509,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9702000021934509,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.006800000090152025,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10798","display_name":"Crystallography and molecular interactions","score":0.00279999990016222,"subfield":{"id":"https://openalex.org/subfields/1606","display_name":"Physical and Theoretical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.7986000180244446},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6901999711990356},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.5845000147819519},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.570900022983551},{"id":"https://openalex.org/keywords/gaussian","display_name":"Gaussian","score":0.5153999924659729},{"id":"https://openalex.org/keywords/gaussian-process","display_name":"Gaussian process","score":0.43939998745918274},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4359000027179718},{"id":"https://openalex.org/keywords/regression","display_name":"Regression","score":0.336899995803833}],"concepts":[{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.7986000180244446},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7530999779701233},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6901999711990356},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.5845000147819519},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.570900022983551},{"id":"https://openalex.org/C163716315","wikidata":"https://www.wikidata.org/wiki/Q901177","display_name":"Gaussian","level":2,"score":0.5153999924659729},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.46000000834465027},{"id":"https://openalex.org/C61326573","wikidata":"https://www.wikidata.org/wiki/Q1496376","display_name":"Gaussian process","level":3,"score":0.43939998745918274},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4359000027179718},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.41819998621940613},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.39259999990463257},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.3474999964237213},{"id":"https://openalex.org/C83546350","wikidata":"https://www.wikidata.org/wiki/Q1139051","display_name":"Regression","level":2,"score":0.336899995803833},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.31850001215934753},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.3093999922275543},{"id":"https://openalex.org/C182620335","wikidata":"https://www.wikidata.org/wiki/Q2852531","display_name":"Answer set programming","level":3,"score":0.2825999855995178},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.27489998936653137},{"id":"https://openalex.org/C66746571","wikidata":"https://www.wikidata.org/wiki/Q1134833","display_name":"ENCODE","level":3,"score":0.2734000086784363},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.2721000015735626},{"id":"https://openalex.org/C84114770","wikidata":"https://www.wikidata.org/wiki/Q46344","display_name":"Quantum","level":2,"score":0.2694999873638153},{"id":"https://openalex.org/C184389593","wikidata":"https://www.wikidata.org/wiki/Q603159","display_name":"Curve fitting","level":2,"score":0.26829999685287476},{"id":"https://openalex.org/C2984519610","wikidata":"https://www.wikidata.org/wiki/Q35127","display_name":"Web site","level":3,"score":0.2662999927997589},{"id":"https://openalex.org/C169903167","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Test set","level":2,"score":0.2574999928474426}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1016/j.softx.2026.102801","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.softx.2026.102801","pdf_url":null,"source":{"id":"https://openalex.org/S2506067282","display_name":"SoftwareX","issn_l":"2352-7110","issn":["2352-7110"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SoftwareX","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1016/j.softx.2026.102801","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.softx.2026.102801","pdf_url":null,"source":{"id":"https://openalex.org/S2506067282","display_name":"SoftwareX","issn_l":"2352-7110","issn":["2352-7110"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SoftwareX","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":6,"referenced_works":["https://openalex.org/W2083415705","https://openalex.org/W2971894235","https://openalex.org/W3011893139","https://openalex.org/W3013002235","https://openalex.org/W3132956480","https://openalex.org/W4400163554"],"related_works":[],"abstract_inverted_index":{"GaussianAPI":[0,51],"is":[1,44],"a":[2,46,57],"RESTful":[3],"web":[4],"service":[5,77],"that":[6,62],"automates":[7],"the":[8,102,113,123,133,137],"construction":[9],"of":[10],"repulsive":[11,24,115],"potentials":[12],"for":[13,140],"density-functional":[14],"tight-binding":[15],"(DFTB)":[16],"simulations":[17],"using":[18,105],"Gaussian":[19],"process":[20],"regression":[21],"(GPR).":[22],"The":[23,76,107],"interaction":[25,116],"term":[26],"in":[27,136,143],"DFTB":[28,134,144],"cannot":[29],"be":[30,120],"derived":[31],"directly":[32],"from":[33,67],"first":[34],"principles":[35],"and":[36,48,59,86,100,118],"requires":[37],"parameterization":[38],"based":[39],"on":[40],"reference":[41,64,84],"data,":[42,139],"which":[43],"traditionally":[45],"complex":[47],"manual":[49],"process.":[50],"addresses":[52],"this":[53],"challenge":[54],"by":[55],"providing":[56],"data-driven":[58],"reproducible":[60],"workflow":[61],"transforms":[63],"datasets":[65,79],"obtained":[66],"quantum":[68],"chemistry":[69],"calculations":[70],"into":[71],"Slater\u2013Koster":[72,126],"(SK)":[73],"parameter":[74,128],"files.":[75],"accepts":[78],"containing":[80],"atomic":[81],"structures,":[82],"DFT":[83],"forces,":[85],"DFT-DFTB":[87],"force":[88],"residuals":[89],"through":[90],"HTTP":[91],"requests,":[92],"either":[93],"via":[94],"direct":[95],"upload":[96],"or":[97],"remote":[98],"access,":[99],"performs":[101],"fitting":[103],"procedure":[104],"GPR.":[106],"generated":[108],".skf":[109],"files":[110],"encode":[111],"only":[112],"fitted":[114],"potential":[117],"must":[119],"combined":[121],"with":[122],"same":[124],"existing":[125],"electronic":[127],"set":[129],"used":[130],"to":[131],"compute":[132],"forces":[135],"training":[138],"complete":[141],"use":[142],"simulations.":[145]},"counts_by_year":[],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2026-06-13T00:00:00"}
