{"id":"https://openalex.org/W3211957066","doi":"https://doi.org/10.1016/j.softx.2021.100854","title":"MicroVIP: Microscopy image simulation on the Virtual Imaging Platform","display_name":"MicroVIP: Microscopy image simulation on the Virtual Imaging Platform","publication_year":2021,"publication_date":"2021-11-15","ids":{"openalex":"https://openalex.org/W3211957066","doi":"https://doi.org/10.1016/j.softx.2021.100854","mag":"3211957066"},"language":"en","primary_location":{"id":"doi:10.1016/j.softx.2021.100854","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.softx.2021.100854","pdf_url":null,"source":{"id":"https://openalex.org/S2506067282","display_name":"SoftwareX","issn_l":"2352-7110","issn":["2352-7110"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SoftwareX","raw_type":"journal-article"},"type":"software-paper","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1016/j.softx.2021.100854","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101623363","display_name":"Ali Ahmad","orcid":null},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I4210115445","display_name":"Laboratoire Angevin de Recherche en Math\u00e9matiques","ror":"https://ror.org/036j0y719","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210115445","https://openalex.org/I4210141950","https://openalex.org/I49451733"]},{"id":"https://openalex.org/I4210118047","display_name":"Laboratoire d\u2019Imagerie Biom\u00e9dicale","ror":"https://ror.org/02b9znm90","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I39804081","https://openalex.org/I4210096427","https://openalex.org/I4210118047"]},{"id":"https://openalex.org/I4210138704","display_name":"Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9","ror":"https://ror.org/03smk3872","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I203339264","https://openalex.org/I203339264","https://openalex.org/I203339264","https://openalex.org/I4210095849","https://openalex.org/I4210100596","https://openalex.org/I4210105738","https://openalex.org/I4210138704","https://openalex.org/I4210159245","https://openalex.org/I4405259976","https://openalex.org/I48430043"]},{"id":"https://openalex.org/I49451733","display_name":"Universit\u00e9 d'Angers","ror":"https://ror.org/04yrqp957","country_code":"FR","type":"education","lineage":["https://openalex.org/I49451733"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ali Ahmad","raw_affiliation_strings":["Centre de Recherche en Acquisition et Traitement de l\u2019Image pour la Sant\u00e9 (CREATIS), CNRS UMR 5220 \u2013 INSERM U1206, Universit\u00e9 Lyon\u00a01, Insa de Lyon, Lyon, France","Laboratoire Angevin de Recherche en Ing\u00e9nierie des Syst\u00e8mes (LARIS), UMR INRAE IRHS, Universit\u00e9 d\u2019Angers, 62 Avenue Notre Dame du Lac, 49000 Angers, France","CREATIS - Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9 (7 avenue Jean Capelle, Bat Blaise Pascal, 69621 Villeurbanne Cedex - France)","MYRIAD - Modeling & analysis for medical imaging and Diagnosis (France)","LARIS - Laboratoire Angevin de Recherche en Ing\u00e9nierie des Syst\u00e8mes (Universit\u00e9 d'Angers, LARIS | Polytech Angers, 62 Avenue Notre Dame du Lac - 49000 Angers - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre de Recherche en Acquisition et Traitement de l\u2019Image pour la Sant\u00e9 (CREATIS), CNRS UMR 5220 \u2013 INSERM U1206, Universit\u00e9 Lyon\u00a01, Insa de Lyon, Lyon, France","institution_ids":["https://openalex.org/I4210138704","https://openalex.org/I154526488","https://openalex.org/I100532134","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Laboratoire Angevin de Recherche en Ing\u00e9nierie des Syst\u00e8mes (LARIS), UMR INRAE IRHS, Universit\u00e9 d\u2019Angers, 62 Avenue Notre Dame du Lac, 49000 Angers, France","institution_ids":["https://openalex.org/I4210115445","https://openalex.org/I49451733","https://openalex.org/I4210088668"]},{"raw_affiliation_string":"CREATIS - Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9 (7 avenue Jean Capelle, Bat Blaise Pascal, 69621 Villeurbanne Cedex - France)","institution_ids":["https://openalex.org/I4210138704"]},{"raw_affiliation_string":"MYRIAD - Modeling & analysis for medical imaging and Diagnosis (France)","institution_ids":["https://openalex.org/I4210118047"]},{"raw_affiliation_string":"LARIS - Laboratoire Angevin de Recherche en Ing\u00e9nierie des Syst\u00e8mes (Universit\u00e9 d'Angers, LARIS | Polytech Angers, 62 Avenue Notre Dame du Lac - 49000 Angers - France)","institution_ids":["https://openalex.org/I4210115445","https://openalex.org/I49451733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107960041","display_name":"Guillaume Vanel","orcid":"https://orcid.org/0000-0003-0600-9033"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210118047","display_name":"Laboratoire d\u2019Imagerie Biom\u00e9dicale","ror":"https://ror.org/02b9znm90","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I39804081","https://openalex.org/I4210096427","https://openalex.org/I4210118047"]},{"id":"https://openalex.org/I4210138704","display_name":"Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9","ror":"https://ror.org/03smk3872","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I203339264","https://openalex.org/I203339264","https://openalex.org/I203339264","https://openalex.org/I4210095849","https://openalex.org/I4210100596","https://openalex.org/I4210105738","https://openalex.org/I4210138704","https://openalex.org/I4210159245","https://openalex.org/I4405259976","https://openalex.org/I48430043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Guillaume Vanel","raw_affiliation_strings":["Centre de Recherche en Acquisition et Traitement de l\u2019Image pour la Sant\u00e9 (CREATIS), CNRS UMR 5220 \u2013 INSERM U1206, Universit\u00e9 Lyon\u00a01, Insa de Lyon, Lyon, France","MYRIAD - Modeling & analysis for medical imaging and Diagnosis (France)","CREATIS - Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9 (7 avenue Jean Capelle, Bat Blaise Pascal, 69621 Villeurbanne Cedex - France)"],"raw_orcid":"https://orcid.org/0000-0003-0600-9033","affiliations":[{"raw_affiliation_string":"Centre de Recherche en Acquisition et Traitement de l\u2019Image pour la Sant\u00e9 (CREATIS), CNRS UMR 5220 \u2013 INSERM U1206, Universit\u00e9 Lyon\u00a01, Insa de Lyon, Lyon, France","institution_ids":["https://openalex.org/I4210138704","https://openalex.org/I154526488","https://openalex.org/I100532134","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"MYRIAD - Modeling & analysis for medical imaging and Diagnosis (France)","institution_ids":["https://openalex.org/I4210118047"]},{"raw_affiliation_string":"CREATIS - Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9 (7 avenue Jean Capelle, Bat Blaise Pascal, 69621 Villeurbanne Cedex - France)","institution_ids":["https://openalex.org/I4210138704"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108023934","display_name":"Sorina Camarasu-Pop","orcid":"https://orcid.org/0000-0002-7923-5069"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210138704","display_name":"Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9","ror":"https://ror.org/03smk3872","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I203339264","https://openalex.org/I203339264","https://openalex.org/I203339264","https://openalex.org/I4210095849","https://openalex.org/I4210100596","https://openalex.org/I4210105738","https://openalex.org/I4210138704","https://openalex.org/I4210159245","https://openalex.org/I4405259976","https://openalex.org/I48430043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Sorina Camarasu-Pop","raw_affiliation_strings":["Centre de Recherche en Acquisition et Traitement de l\u2019Image pour la Sant\u00e9 (CREATIS), CNRS UMR 5220 \u2013 INSERM U1206, Universit\u00e9 Lyon\u00a01, Insa de Lyon, Lyon, France","Service Informatique et d\u00e9veloppements (France)","CREATIS - Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9 (7 avenue Jean Capelle, Bat Blaise Pascal, 69621 Villeurbanne Cedex - France)"],"raw_orcid":"https://orcid.org/0000-0002-7923-5069","affiliations":[{"raw_affiliation_string":"Centre de Recherche en Acquisition et Traitement de l\u2019Image pour la Sant\u00e9 (CREATIS), CNRS UMR 5220 \u2013 INSERM U1206, Universit\u00e9 Lyon\u00a01, Insa de Lyon, Lyon, France","institution_ids":["https://openalex.org/I4210138704","https://openalex.org/I154526488","https://openalex.org/I100532134","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Service Informatique et d\u00e9veloppements (France)","institution_ids":[]},{"raw_affiliation_string":"CREATIS - Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9 (7 avenue Jean Capelle, Bat Blaise Pascal, 69621 Villeurbanne Cedex - France)","institution_ids":["https://openalex.org/I4210138704"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024532786","display_name":"Axel Bonnet","orcid":"https://orcid.org/0000-0003-1753-7894"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210138704","display_name":"Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9","ror":"https://ror.org/03smk3872","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I203339264","https://openalex.org/I203339264","https://openalex.org/I203339264","https://openalex.org/I4210095849","https://openalex.org/I4210100596","https://openalex.org/I4210105738","https://openalex.org/I4210138704","https://openalex.org/I4210159245","https://openalex.org/I4405259976","https://openalex.org/I48430043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Axel Bonnet","raw_affiliation_strings":["Centre de Recherche en Acquisition et Traitement de l\u2019Image pour la Sant\u00e9 (CREATIS), CNRS UMR 5220 \u2013 INSERM U1206, Universit\u00e9 Lyon\u00a01, Insa de Lyon, Lyon, France","Service Informatique et d\u00e9veloppements (France)","CREATIS - Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9 (7 avenue Jean Capelle, Bat Blaise Pascal, 69621 Villeurbanne Cedex - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre de Recherche en Acquisition et Traitement de l\u2019Image pour la Sant\u00e9 (CREATIS), CNRS UMR 5220 \u2013 INSERM U1206, Universit\u00e9 Lyon\u00a01, Insa de Lyon, Lyon, France","institution_ids":["https://openalex.org/I4210138704","https://openalex.org/I154526488","https://openalex.org/I100532134","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Service Informatique et d\u00e9veloppements (France)","institution_ids":[]},{"raw_affiliation_string":"CREATIS - Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9 (7 avenue Jean Capelle, Bat Blaise Pascal, 69621 Villeurbanne Cedex - France)","institution_ids":["https://openalex.org/I4210138704"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072554919","display_name":"Carole Frindel","orcid":"https://orcid.org/0000-0003-4570-0994"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210118047","display_name":"Laboratoire d\u2019Imagerie Biom\u00e9dicale","ror":"https://ror.org/02b9znm90","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I39804081","https://openalex.org/I4210096427","https://openalex.org/I4210118047"]},{"id":"https://openalex.org/I4210138704","display_name":"Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9","ror":"https://ror.org/03smk3872","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I203339264","https://openalex.org/I203339264","https://openalex.org/I203339264","https://openalex.org/I4210095849","https://openalex.org/I4210100596","https://openalex.org/I4210105738","https://openalex.org/I4210138704","https://openalex.org/I4210159245","https://openalex.org/I4405259976","https://openalex.org/I48430043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Carole Frindel","raw_affiliation_strings":["Centre de Recherche en Acquisition et Traitement de l\u2019Image pour la Sant\u00e9 (CREATIS), CNRS UMR 5220 \u2013 INSERM U1206, Universit\u00e9 Lyon\u00a01, Insa de Lyon, Lyon, France","MYRIAD - Modeling & analysis for medical imaging and Diagnosis (France)","CREATIS - Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9 (7 avenue Jean Capelle, Bat Blaise Pascal, 69621 Villeurbanne Cedex - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre de Recherche en Acquisition et Traitement de l\u2019Image pour la Sant\u00e9 (CREATIS), CNRS UMR 5220 \u2013 INSERM U1206, Universit\u00e9 Lyon\u00a01, Insa de Lyon, Lyon, France","institution_ids":["https://openalex.org/I4210138704","https://openalex.org/I154526488","https://openalex.org/I100532134","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"MYRIAD - Modeling & analysis for medical imaging and Diagnosis (France)","institution_ids":["https://openalex.org/I4210118047"]},{"raw_affiliation_string":"CREATIS - Centre de Recherche en Acquisition et Traitement de l'Image pour la Sant\u00e9 (7 avenue Jean Capelle, Bat Blaise Pascal, 69621 Villeurbanne Cedex - France)","institution_ids":["https://openalex.org/I4210138704"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101899914","display_name":"David Rousseau","orcid":"https://orcid.org/0000-0002-7935-1609"},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I4210115445","display_name":"Laboratoire Angevin de Recherche en Math\u00e9matiques","ror":"https://ror.org/036j0y719","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210115445","https://openalex.org/I4210141950","https://openalex.org/I49451733"]},{"id":"https://openalex.org/I49451733","display_name":"Universit\u00e9 d'Angers","ror":"https://ror.org/04yrqp957","country_code":"FR","type":"education","lineage":["https://openalex.org/I49451733"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"David Rousseau","raw_affiliation_strings":["Laboratoire Angevin de Recherche en Ing\u00e9nierie des Syst\u00e8mes (LARIS), UMR INRAE IRHS, Universit\u00e9 d\u2019Angers, 62 Avenue Notre Dame du Lac, 49000 Angers, France","LARIS - Laboratoire Angevin de Recherche en Ing\u00e9nierie des Syst\u00e8mes (Universit\u00e9 d'Angers, LARIS | Polytech Angers, 62 Avenue Notre Dame du Lac - 49000 Angers - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratoire Angevin de Recherche en Ing\u00e9nierie des Syst\u00e8mes (LARIS), UMR INRAE IRHS, Universit\u00e9 d\u2019Angers, 62 Avenue Notre Dame du Lac, 49000 Angers, France","institution_ids":["https://openalex.org/I4210115445","https://openalex.org/I49451733","https://openalex.org/I4210088668"]},{"raw_affiliation_string":"LARIS - Laboratoire Angevin de Recherche en Ing\u00e9nierie des Syst\u00e8mes (Universit\u00e9 d'Angers, LARIS | Polytech Angers, 62 Avenue Notre Dame du Lac - 49000 Angers - France)","institution_ids":["https://openalex.org/I4210115445","https://openalex.org/I49451733"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5101899914"],"corresponding_institution_ids":["https://openalex.org/I4210088668","https://openalex.org/I4210115445","https://openalex.org/I49451733"],"apc_list":{"value":500,"currency":"USD","value_usd":500},"apc_paid":{"value":397,"currency":"EUR","value_usd":428},"fwci":null,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"16","issue":null,"first_page":"100854","last_page":"100854"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8048986792564392},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.6253688335418701},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5744513869285583},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5053263306617737},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.4954928159713745},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4860589802265167},{"id":"https://openalex.org/keywords/scripting-language","display_name":"Scripting language","score":0.42392072081565857},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.36966103315353394},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.2589876353740692}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8048986792564392},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.6253688335418701},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5744513869285583},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5053263306617737},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4954928159713745},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4860589802265167},{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.42392072081565857},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.36966103315353394},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.2589876353740692},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1016/j.softx.2021.100854","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.softx.2021.100854","pdf_url":null,"source":{"id":"https://openalex.org/S2506067282","display_name":"SoftwareX","issn_l":"2352-7110","issn":["2352-7110"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SoftwareX","raw_type":"journal-article"},{"id":"pmh:oai:HAL:hal-03619436v1","is_oa":false,"landing_page_url":"https://hal.science/hal-03619436","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"SoftwareX, 2021, 16, pp.100854. &#x27E8;10.1016/j.softx.2021.100854&#x27E9;","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:444258291499420cab568f8059931f60","is_oa":true,"landing_page_url":"https://doaj.org/article/444258291499420cab568f8059931f60","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"SoftwareX, Vol 16, Iss , Pp 100854- (2021)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1016/j.softx.2021.100854","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.softx.2021.100854","pdf_url":null,"source":{"id":"https://openalex.org/S2506067282","display_name":"SoftwareX","issn_l":"2352-7110","issn":["2352-7110"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SoftwareX","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5226708285","display_name":null,"funder_award_id":"801336","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"},{"id":"https://openalex.org/G7331901853","display_name":null,"funder_award_id":"EU H2020","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"}],"funders":[{"id":"https://openalex.org/F4320316536","display_name":"EGI","ror":"https://ror.org/052jj4m32"},{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320334322","display_name":"HORIZON EUROPE Framework Programme","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":33,"referenced_works":["https://openalex.org/W431214334","https://openalex.org/W1970884399","https://openalex.org/W1988809254","https://openalex.org/W2030224529","https://openalex.org/W2044465660","https://openalex.org/W2072072671","https://openalex.org/W2084133980","https://openalex.org/W2090356912","https://openalex.org/W2120280503","https://openalex.org/W2124298471","https://openalex.org/W2136839665","https://openalex.org/W2139916508","https://openalex.org/W2149251234","https://openalex.org/W2163352848","https://openalex.org/W2291672038","https://openalex.org/W2516778335","https://openalex.org/W2543543758","https://openalex.org/W2605069177","https://openalex.org/W2623149690","https://openalex.org/W2798037628","https://openalex.org/W2839111036","https://openalex.org/W2946637032","https://openalex.org/W2950501364","https://openalex.org/W2990868538","https://openalex.org/W3009096227","https://openalex.org/W3028538478","https://openalex.org/W3103084108","https://openalex.org/W3111595459","https://openalex.org/W3159554424","https://openalex.org/W3159572645","https://openalex.org/W4244280982","https://openalex.org/W6672934715","https://openalex.org/W6786626511"],"related_works":["https://openalex.org/W2046765700","https://openalex.org/W2780629932","https://openalex.org/W4384345686","https://openalex.org/W2357937784","https://openalex.org/W2547618384","https://openalex.org/W4394391052","https://openalex.org/W2145834781","https://openalex.org/W2577782152","https://openalex.org/W262455470","https://openalex.org/W2736583656"],"abstract_inverted_index":{"MicroVIP":[0,31,51,77],"is":[1,78],"an":[2],"open":[3],"source":[4],"software":[5],"that":[6],"assembles,":[7],"in":[8],"a":[9,54,64],"unified":[10],"web-application":[11],"running":[12],"on":[13],"distributed":[14],"computing":[15],"resources,":[16],"simulators":[17],"of":[18,39,82,95],"the":[19,68,103],"main":[20],"fluorescent":[21,61],"microscopy":[22],"imaging":[23],"modalities":[24],"(with":[25],"existing":[26],"codes":[27],"or":[28],"newly":[29],"developed).":[30],"provides":[32],"realistic":[33],"simulated":[34,69],"images":[35,70,97],"including":[36],"several":[37],"sources":[38],"noise":[40],"(microfluidic":[41],"blur":[42],"effect,":[43],"diffraction,":[44],"Poisson":[45],"noise,":[46],"camera":[47],"read":[48],"out":[49],"noise).":[50],"also":[52],"includes":[53],"module":[55,65],"which":[56],"simulates":[57],"single":[58],"cells":[59],"with":[60,71],"markers":[62],"and":[63,73,98],"to":[66,80,90,101],"analyze":[67],"textural":[72],"pointillist":[74],"feature":[75],"spaces.":[76],"shown":[79],"be":[81],"value":[83],"for":[84],"supervised":[85],"machine":[86],"learning.":[87],"It":[88],"allow":[89],"automatically":[91],"generate":[92],"large":[93],"sets":[94],"training":[96],"virtual":[99],"instrumentation":[100],"optimize":[102],"optical":[104],"parameters":[105],"before":[106],"realizing":[107],"real":[108],"experiments.":[109]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-07-21T08:15:58.654021","created_date":"2025-10-10T00:00:00"}
