{"id":"https://openalex.org/W4290839093","doi":"https://doi.org/10.1016/j.patter.2022.100572","title":"Analyzing the impact of a real-life outbreak simulator on pandemic mitigation: An epidemiological modeling study","display_name":"Analyzing the impact of a real-life outbreak simulator on pandemic mitigation: An epidemiological modeling study","publication_year":2022,"publication_date":"2022-08-01","ids":{"openalex":"https://openalex.org/W4290839093","doi":"https://doi.org/10.1016/j.patter.2022.100572","pmid":"https://pubmed.ncbi.nlm.nih.gov/36033592"},"language":"en","primary_location":{"id":"doi:10.1016/j.patter.2022.100572","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.patter.2022.100572","pdf_url":"http://www.cell.com/article/S2666389922001830/pdf","source":{"id":"https://openalex.org/S4210198061","display_name":"Patterns","issn_l":"2666-3899","issn":["2666-3899"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Patterns","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"http://www.cell.com/article/S2666389922001830/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061969625","display_name":"Ivan Specht","orcid":"https://orcid.org/0000-0003-2834-8191"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ivan Specht","raw_affiliation_strings":["Harvard College, Faculty of Arts and Sciences, Harvard University, Cambridge, MA 02138, USA","The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard College, Faculty of Arts and Sciences, Harvard University, Cambridge, MA 02138, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046926200","display_name":"Kian Sani","orcid":"https://orcid.org/0000-0002-0907-8643"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210155419","display_name":"Center for Systems Biology","ror":"https://ror.org/05r3dyn47","country_code":"US","type":"facility","lineage":["https://openalex.org/I136199984","https://openalex.org/I4210087915","https://openalex.org/I4210155419","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kian Sani","raw_affiliation_strings":["FAS Center for Systems Biology, Department of Organismic and Evolutionary Biology, Faculty of Arts and Sciences, Harvard University, Cambridge, MA 02138, USA","The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"FAS Center for Systems Biology, Department of Organismic and Evolutionary Biology, Faculty of Arts and Sciences, Harvard University, Cambridge, MA 02138, USA","institution_ids":["https://openalex.org/I136199984","https://openalex.org/I4210155419"]},{"raw_affiliation_string":"The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002477071","display_name":"Bryn C. Loftness","orcid":"https://orcid.org/0000-0003-4597-0783"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1354457","display_name":"Colorado Mesa University","ror":"https://ror.org/0451s5g67","country_code":"US","type":"education","lineage":["https://openalex.org/I1354457"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bryn C. Loftness","raw_affiliation_strings":["Colorado Mesa University, Grand Junction, CO 81501, USA","The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Colorado Mesa University, Grand Junction, CO 81501, USA","institution_ids":["https://openalex.org/I1354457"]},{"raw_affiliation_string":"The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112735558","display_name":"Curtis Hoffman","orcid":null},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]},{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Curtis Hoffman","raw_affiliation_strings":["Department of Microbiology and Molecular Biology, College of Life Sciences, Brigham Young University, Provo, UT 84606, USA","The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Molecular Biology, College of Life Sciences, Brigham Young University, Provo, UT 84606, USA","institution_ids":["https://openalex.org/I100005738"]},{"raw_affiliation_string":"The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081638348","display_name":"Gabrielle Gionet","orcid":null},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gabrielle Gionet","raw_affiliation_strings":["The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008261829","display_name":"Amy Bronson","orcid":null},"institutions":[{"id":"https://openalex.org/I1354457","display_name":"Colorado Mesa University","ror":"https://ror.org/0451s5g67","country_code":"US","type":"education","lineage":["https://openalex.org/I1354457"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amy Bronson","raw_affiliation_strings":["Colorado Mesa University, Grand Junction, CO 81501, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Colorado Mesa University, Grand Junction, CO 81501, USA","institution_ids":["https://openalex.org/I1354457"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011201479","display_name":"John Marshall","orcid":"https://orcid.org/0000-0001-9576-1475"},"institutions":[{"id":"https://openalex.org/I1354457","display_name":"Colorado Mesa University","ror":"https://ror.org/0451s5g67","country_code":"US","type":"education","lineage":["https://openalex.org/I1354457"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Marshall","raw_affiliation_strings":["Colorado Mesa University, Grand Junction, CO 81501, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Colorado Mesa University, Grand Junction, CO 81501, USA","institution_ids":["https://openalex.org/I1354457"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037974081","display_name":"Craig Decker","orcid":"https://orcid.org/0000-0002-2918-7062"},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Craig Decker","raw_affiliation_strings":["Department of Microbiology and Molecular Biology, College of Life Sciences, Brigham Young University, Provo, UT 84606, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Molecular Biology, College of Life Sciences, Brigham Young University, Provo, UT 84606, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022984663","display_name":"Landen Bailey","orcid":null},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Landen Bailey","raw_affiliation_strings":["Department of Microbiology and Molecular Biology, College of Life Sciences, Brigham Young University, Provo, UT 84606, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Molecular Biology, College of Life Sciences, Brigham Young University, Provo, UT 84606, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009597988","display_name":"Tomi Siyanbade","orcid":null},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tomi Siyanbade","raw_affiliation_strings":["Harvard College, Faculty of Arts and Sciences, Harvard University, Cambridge, MA 02138, USA","The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard College, Faculty of Arts and Sciences, Harvard University, Cambridge, MA 02138, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081820413","display_name":"Molly Kemball","orcid":"https://orcid.org/0000-0002-6085-9314"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210155419","display_name":"Center for Systems Biology","ror":"https://ror.org/05r3dyn47","country_code":"US","type":"facility","lineage":["https://openalex.org/I136199984","https://openalex.org/I4210087915","https://openalex.org/I4210155419","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Molly Kemball","raw_affiliation_strings":["FAS Center for Systems Biology, Department of Organismic and Evolutionary Biology, Faculty of Arts and Sciences, Harvard University, Cambridge, MA 02138, USA","The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"FAS Center for Systems Biology, Department of Organismic and Evolutionary Biology, Faculty of Arts and Sciences, Harvard University, Cambridge, MA 02138, USA","institution_ids":["https://openalex.org/I136199984","https://openalex.org/I4210155419"]},{"raw_affiliation_string":"The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081038591","display_name":"Brett E Pickett","orcid":"https://orcid.org/0000-0001-7930-8160"},"institutions":[{"id":"https://openalex.org/I100005738","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47","country_code":"US","type":"education","lineage":["https://openalex.org/I100005738"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brett E. Pickett","raw_affiliation_strings":["Department of Microbiology and Molecular Biology, College of Life Sciences, Brigham Young University, Provo, UT 84606, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Molecular Biology, College of Life Sciences, Brigham Young University, Provo, UT 84606, USA","institution_ids":["https://openalex.org/I100005738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040018261","display_name":"William P. Hanage","orcid":"https://orcid.org/0000-0002-6319-7336"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1338678786","display_name":"Center for Disease Dynamics, Economics & Policy","ror":"https://ror.org/01skhd946","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1338678786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William P. Hanage","raw_affiliation_strings":["Center for Communicable Disease Dynamics, Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA","The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Communicable Disease Dynamics, Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I1338678786"]},{"raw_affiliation_string":"The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065903745","display_name":"Todd Brown","orcid":"https://orcid.org/0000-0002-6835-090X"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Todd Brown","raw_affiliation_strings":["The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047819759","display_name":"Pardis C. Sabeti","orcid":"https://orcid.org/0000-0002-9843-1890"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I1344073410","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210155419","display_name":"Center for Systems Biology","ror":"https://ror.org/05r3dyn47","country_code":"US","type":"facility","lineage":["https://openalex.org/I136199984","https://openalex.org/I4210087915","https://openalex.org/I4210155419","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Pardis C. Sabeti","raw_affiliation_strings":["Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Harvard University, Boston, MA 02115, USA","FAS Center for Systems Biology, Department of Organismic and Evolutionary Biology, Faculty of Arts and Sciences, Harvard University, Cambridge, MA 02138, USA","Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA","Massachusetts Consortium on Pathogen Readiness, Harvard Medical School, Harvard University, Boston, MA 02115, USA","The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Harvard University, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"FAS Center for Systems Biology, Department of Organismic and Evolutionary Biology, Faculty of Arts and Sciences, Harvard University, Cambridge, MA 02138, USA","institution_ids":["https://openalex.org/I136199984","https://openalex.org/I4210155419"]},{"raw_affiliation_string":"Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA","institution_ids":["https://openalex.org/I1344073410"]},{"raw_affiliation_string":"Massachusetts Consortium on Pathogen Readiness, Harvard Medical School, Harvard University, Boston, MA 02115, USA","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071695607","display_name":"Andr\u00e9s Colubri","orcid":"https://orcid.org/0000-0001-5559-9661"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I166722992","display_name":"University of Massachusetts Chan Medical School","ror":"https://ror.org/0464eyp60","country_code":"US","type":"education","lineage":["https://openalex.org/I166722992"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Andr\u00e9s Colubri","raw_affiliation_strings":["Program in Bioinformatics and Integrative Biology, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA","The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA"],"raw_orcid":"https://orcid.org/0000-0001-5559-9661","affiliations":[{"raw_affiliation_string":"Program in Bioinformatics and Integrative Biology, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA","institution_ids":["https://openalex.org/I166722992"]},{"raw_affiliation_string":"The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA","institution_ids":["https://openalex.org/I107606265"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5047819759","https://openalex.org/A5061969625","https://openalex.org/A5071695607"],"corresponding_institution_ids":["https://openalex.org/I107606265","https://openalex.org/I1344073410","https://openalex.org/I136199984","https://openalex.org/I166722992","https://openalex.org/I4210155419"],"apc_list":{"value":8900,"currency":"USD","value_usd":8900},"apc_paid":{"value":8900,"currency":"USD","value_usd":8900},"fwci":0.3841,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.51411114,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"3","issue":"8","first_page":"100572","last_page":"100572"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12943","display_name":"COVID-19 Digital Contact Tracing","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11819","display_name":"Data-Driven Disease Surveillance","score":0.986299991607666,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pandemic","display_name":"Pandemic","score":0.7739351391792297},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.5865674614906311},{"id":"https://openalex.org/keywords/outbreak","display_name":"Outbreak","score":0.5849534273147583},{"id":"https://openalex.org/keywords/epidemiology","display_name":"Epidemiology","score":0.4672764539718628},{"id":"https://openalex.org/keywords/environmental-science","display_name":"Environmental science","score":0.34510594606399536},{"id":"https://openalex.org/keywords/environmental-health","display_name":"Environmental health","score":0.3402719497680664},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3340528905391693},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.149814635515213},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.14563021063804626},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.0542011559009552}],"concepts":[{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.7739351391792297},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.5865674614906311},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.5849534273147583},{"id":"https://openalex.org/C107130276","wikidata":"https://www.wikidata.org/wiki/Q133805","display_name":"Epidemiology","level":2,"score":0.4672764539718628},{"id":"https://openalex.org/C39432304","wikidata":"https://www.wikidata.org/wiki/Q188847","display_name":"Environmental science","level":0,"score":0.34510594606399536},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.3402719497680664},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3340528905391693},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.149814635515213},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.14563021063804626},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.0542011559009552},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1016/j.patter.2022.100572","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.patter.2022.100572","pdf_url":"http://www.cell.com/article/S2666389922001830/pdf","source":{"id":"https://openalex.org/S4210198061","display_name":"Patterns","issn_l":"2666-3899","issn":["2666-3899"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Patterns","raw_type":"journal-article"},{"id":"pmid:36033592","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36033592","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Patterns (New York, N.Y.)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9403368","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9403368","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Patterns (N Y)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1016/j.patter.2022.100572","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.patter.2022.100572","pdf_url":"http://www.cell.com/article/S2666389922001830/pdf","source":{"id":"https://openalex.org/S4210198061","display_name":"Patterns","issn_l":"2666-3899","issn":["2666-3899"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Patterns","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.8399999737739563,"display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G244477757","display_name":null,"funder_award_id":"9125.01","funder_id":"https://openalex.org/F4320306202","funder_display_name":"Gordon and Betty Moore Foundation"},{"id":"https://openalex.org/G2805909707","display_name":null,"funder_award_id":"H00024280","funder_id":"https://openalex.org/F4320332606","funder_display_name":"University of Massachusetts Medical School"},{"id":"https://openalex.org/G6866614142","display_name":null,"funder_award_id":"IRB2021-207","funder_id":"https://openalex.org/F4320306202","funder_display_name":"Gordon and Betty Moore Foundation"}],"funders":[{"id":"https://openalex.org/F4320306202","display_name":"Gordon and Betty Moore Foundation","ror":"https://ror.org/006wxqw41"},{"id":"https://openalex.org/F4320309309","display_name":"Brigham Young University","ror":"https://ror.org/047rhhm47"},{"id":"https://openalex.org/F4320309622","display_name":"Harvard University","ror":"https://ror.org/03vek6s52"},{"id":"https://openalex.org/F4320310207","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33"},{"id":"https://openalex.org/F4320314070","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142"},{"id":"https://openalex.org/F4320332606","display_name":"University of Massachusetts Medical School","ror":"https://ror.org/0464eyp60"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4290839093.pdf"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W229097380","https://openalex.org/W2030539428","https://openalex.org/W2084061341","https://openalex.org/W2147470791","https://openalex.org/W2159301256","https://openalex.org/W2558350004","https://openalex.org/W2792316996","https://openalex.org/W3017780014","https://openalex.org/W3048238828","https://openalex.org/W3081609513","https://openalex.org/W3087049973","https://openalex.org/W3087504411","https://openalex.org/W3090149370","https://openalex.org/W3117919044","https://openalex.org/W3118796209","https://openalex.org/W3122988223","https://openalex.org/W3127207020","https://openalex.org/W3127675217","https://openalex.org/W3129222183","https://openalex.org/W3133973522","https://openalex.org/W3134796676","https://openalex.org/W3163076983","https://openalex.org/W3181360113","https://openalex.org/W4224098631","https://openalex.org/W4310576796","https://openalex.org/W4389517692","https://openalex.org/W4399569048","https://openalex.org/W6608852248","https://openalex.org/W6783409892","https://openalex.org/W6795318601","https://openalex.org/W6810120259","https://openalex.org/W6858958661"],"related_works":["https://openalex.org/W2373635223","https://openalex.org/W2412355096","https://openalex.org/W1990012352","https://openalex.org/W2431766951","https://openalex.org/W4385969441","https://openalex.org/W127458931","https://openalex.org/W2362266265","https://openalex.org/W2557977292","https://openalex.org/W120499389","https://openalex.org/W3046517191"],"abstract_inverted_index":{"An":[0],"app-based":[1],"educational":[2],"outbreak":[3],"simulator,":[4],"Operation":[5],"Outbreak":[6],"(OO),":[7],"seeks":[8],"to":[9,14,17,109,132],"engage":[10],"and":[11,51,63,79,89,137],"educate":[12],"participants":[13,69],"better":[15],"respond":[16],"outbreaks.":[18],"Here,":[19],"we":[20,122],"examine":[21],"the":[22,61,66,71,75,105,111,125],"utility":[23],"of":[24,65,70,81,114,127],"OO":[25,31,55,128],"for":[26],"understanding":[27],"epidemiological":[28,101],"dynamics.":[29],"The":[30],"app":[32],"enables":[33,130],"experience-based":[34],"learning":[35],"about":[36],"outbreaks,":[37],"spreading":[38],"a":[39],"virtual":[40],"pathogen":[41],"via":[42],"Bluetooth":[43],"among":[44,68],"participating":[45],"smartphones.":[46],"Deployed":[47],"at":[48,85],"many":[49],"colleges":[50],"in":[52],"other":[53],"settings,":[54],"collects":[56],"anonymized":[57],"spatiotemporal":[58],"data,":[59],"including":[60],"time":[62],"duration":[64],"contacts":[67,84],"simulation.":[72],"We":[73,98],"report":[74],"distribution,":[76],"timing,":[77],"duration,":[78],"connectedness":[80],"student":[82],"social":[83,146],"two":[86],"university":[87],"deployments":[88],"uncover":[90],"cryptic":[91],"transmission":[92,112],"pathways":[93,113],"through":[94],"individuals'":[95],"second-degree":[96],"contacts.":[97],"then":[99],"construct":[100],"models":[102],"based":[103,143],"on":[104,144],"OO-generated":[106],"contact":[107],"networks":[108],"predict":[110],"hypothetical":[115],"pathogens":[116],"with":[117],"varying":[118],"reproductive":[119],"numbers.":[120],"Finally,":[121],"demonstrate":[123],"that":[124],"granularity":[126],"data":[129],"institutions":[131],"mitigate":[133],"outbreaks":[134],"by":[135],"proactively":[136],"strategically":[138],"testing":[139],"and/or":[140],"vaccinating":[141],"individuals":[142],"individual":[145],"interaction":[147],"levels.":[148]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}
