{"id":"https://openalex.org/W2461519154","doi":"https://doi.org/10.1016/j.neuroimage.2016.06.039","title":"Automated segmentation of the substantia nigra, subthalamic nucleus and red nucleus in 7 T data at young and old age","display_name":"Automated segmentation of the substantia nigra, subthalamic nucleus and red nucleus in 7 T data at young and old age","publication_year":2016,"publication_date":"2016-06-26","ids":{"openalex":"https://openalex.org/W2461519154","doi":"https://doi.org/10.1016/j.neuroimage.2016.06.039","mag":"2461519154","pmid":"https://pubmed.ncbi.nlm.nih.gov/27349329"},"language":"en","primary_location":{"id":"doi:10.1016/j.neuroimage.2016.06.039","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.neuroimage.2016.06.039","pdf_url":null,"source":{"id":"https://openalex.org/S103225281","display_name":"NeuroImage","issn_l":"1053-8119","issn":["1053-8119","1095-9572"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"NeuroImage","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1016/j.neuroimage.2016.06.039","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111905436","display_name":"Eelke Visser","orcid":null},"institutions":[{"id":"https://openalex.org/I4210101881","display_name":"Wellcome Centre for Integrative Neuroimaging","ror":"https://ror.org/0172mzb45","country_code":"GB","type":"facility","lineage":["https://openalex.org/I40120149","https://openalex.org/I4210101881","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Eelke Visser","raw_affiliation_strings":["FMRIB Centre, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom. Electronic address: eelke.visser@ndcn.ox.ac.uk","FMRIB Centre, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom"],"affiliations":[{"raw_affiliation_string":"FMRIB Centre, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom. Electronic address: eelke.visser@ndcn.ox.ac.uk","institution_ids":[]},{"raw_affiliation_string":"FMRIB Centre, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom","institution_ids":["https://openalex.org/I4210101881","https://openalex.org/I40120149"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046520093","display_name":"Max C. Keuken","orcid":"https://orcid.org/0000-0002-9703-9125"},"institutions":[{"id":"https://openalex.org/I887064364","display_name":"University of Amsterdam","ror":"https://ror.org/04dkp9463","country_code":"NL","type":"education","lineage":["https://openalex.org/I887064364"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Max C. Keuken","raw_affiliation_strings":["Amsterdam Brain and Cognition, University of Amsterdam, Amsterdam, Netherlands"],"affiliations":[{"raw_affiliation_string":"Amsterdam Brain and Cognition, University of Amsterdam, Amsterdam, Netherlands","institution_ids":["https://openalex.org/I887064364"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032945266","display_name":"Birte U. Forstmann","orcid":"https://orcid.org/0000-0002-1005-1675"},"institutions":[{"id":"https://openalex.org/I887064364","display_name":"University of Amsterdam","ror":"https://ror.org/04dkp9463","country_code":"NL","type":"education","lineage":["https://openalex.org/I887064364"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Birte U. Forstmann","raw_affiliation_strings":["Amsterdam Brain and Cognition, University of Amsterdam, Amsterdam, Netherlands"],"affiliations":[{"raw_affiliation_string":"Amsterdam Brain and Cognition, University of Amsterdam, Amsterdam, Netherlands","institution_ids":["https://openalex.org/I887064364"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004220534","display_name":"Mark Jenkinson","orcid":"https://orcid.org/0000-0001-6043-0166"},"institutions":[{"id":"https://openalex.org/I4210101881","display_name":"Wellcome Centre for Integrative Neuroimaging","ror":"https://ror.org/0172mzb45","country_code":"GB","type":"facility","lineage":["https://openalex.org/I40120149","https://openalex.org/I4210101881","https://openalex.org/I87048295"]},{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mark Jenkinson","raw_affiliation_strings":["FMRIB Centre, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom"],"affiliations":[{"raw_affiliation_string":"FMRIB Centre, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom","institution_ids":["https://openalex.org/I4210101881","https://openalex.org/I40120149"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5111905436"],"corresponding_institution_ids":["https://openalex.org/I40120149","https://openalex.org/I4210101881"],"apc_list":{"value":3450,"currency":"USD","value_usd":3450},"apc_paid":{"value":2687,"currency":"EUR","value_usd":2897},"fwci":4.9386,"has_fulltext":true,"cited_by_count":70,"citation_normalized_percentile":{"value":0.95212677,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"139","issue":null,"first_page":"324","last_page":"336"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10919","display_name":"Neurological disorders and treatments","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2728","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10919","display_name":"Neurological disorders and treatments","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2728","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10085","display_name":"Parkinson's Disease Mechanisms and Treatments","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/2728","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/subthalamic-nucleus","display_name":"Subthalamic nucleus","score":0.8384011387825012},{"id":"https://openalex.org/keywords/substantia-nigra","display_name":"Substantia nigra","score":0.7237989902496338},{"id":"https://openalex.org/keywords/red-nucleus","display_name":"Red nucleus","score":0.7073989510536194},{"id":"https://openalex.org/keywords/globus-pallidus","display_name":"Globus pallidus","score":0.6829922199249268},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6674538254737854},{"id":"https://openalex.org/keywords/brainstem","display_name":"Brainstem","score":0.5796442031860352},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.5566010475158691},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4947773814201355},{"id":"https://openalex.org/keywords/striatum","display_name":"Striatum","score":0.4740084111690521},{"id":"https://openalex.org/keywords/midbrain","display_name":"Midbrain","score":0.4723930060863495},{"id":"https://openalex.org/keywords/nucleus","display_name":"Nucleus","score":0.46643686294555664},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4419195055961609},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4296499788761139},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.32508519291877747},{"id":"https://openalex.org/keywords/parkinsons-disease","display_name":"Parkinson's disease","score":0.3006860315799713},{"id":"https://openalex.org/keywords/basal-ganglia","display_name":"Basal ganglia","score":0.27825409173965454},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.22731804847717285},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.13491752743721008},{"id":"https://openalex.org/keywords/deep-brain-stimulation","display_name":"Deep brain stimulation","score":0.13345304131507874},{"id":"https://openalex.org/keywords/central-nervous-system","display_name":"Central nervous system","score":0.11193335056304932},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.1118154525756836},{"id":"https://openalex.org/keywords/dopamine","display_name":"Dopamine","score":0.10183548927307129},{"id":"https://openalex.org/keywords/dopaminergic","display_name":"Dopaminergic","score":0.09974586963653564}],"concepts":[{"id":"https://openalex.org/C2777319143","wikidata":"https://www.wikidata.org/wiki/Q2270424","display_name":"Subthalamic nucleus","level":5,"score":0.8384011387825012},{"id":"https://openalex.org/C2780938664","wikidata":"https://www.wikidata.org/wiki/Q753278","display_name":"Substantia nigra","level":4,"score":0.7237989902496338},{"id":"https://openalex.org/C2779384463","wikidata":"https://www.wikidata.org/wiki/Q1751717","display_name":"Red nucleus","level":3,"score":0.7073989510536194},{"id":"https://openalex.org/C2780278869","wikidata":"https://www.wikidata.org/wiki/Q1759633","display_name":"Globus pallidus","level":4,"score":0.6829922199249268},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6674538254737854},{"id":"https://openalex.org/C551621295","wikidata":"https://www.wikidata.org/wiki/Q182228","display_name":"Brainstem","level":2,"score":0.5796442031860352},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.5566010475158691},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4947773814201355},{"id":"https://openalex.org/C2780062018","wikidata":"https://www.wikidata.org/wiki/Q1319792","display_name":"Striatum","level":3,"score":0.4740084111690521},{"id":"https://openalex.org/C552161191","wikidata":"https://www.wikidata.org/wiki/Q185080","display_name":"Midbrain","level":3,"score":0.4723930060863495},{"id":"https://openalex.org/C2780723820","wikidata":"https://www.wikidata.org/wiki/Q1934178","display_name":"Nucleus","level":2,"score":0.46643686294555664},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4419195055961609},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4296499788761139},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.32508519291877747},{"id":"https://openalex.org/C2779734285","wikidata":"https://www.wikidata.org/wiki/Q11085","display_name":"Parkinson's disease","level":3,"score":0.3006860315799713},{"id":"https://openalex.org/C2778187257","wikidata":"https://www.wikidata.org/wiki/Q464210","display_name":"Basal ganglia","level":3,"score":0.27825409173965454},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.22731804847717285},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.13491752743721008},{"id":"https://openalex.org/C2778542668","wikidata":"https://www.wikidata.org/wiki/Q618076","display_name":"Deep brain stimulation","level":4,"score":0.13345304131507874},{"id":"https://openalex.org/C529278444","wikidata":"https://www.wikidata.org/wiki/Q47273","display_name":"Central nervous system","level":2,"score":0.11193335056304932},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.1118154525756836},{"id":"https://openalex.org/C513476851","wikidata":"https://www.wikidata.org/wiki/Q170304","display_name":"Dopamine","level":2,"score":0.10183548927307129},{"id":"https://openalex.org/C137183658","wikidata":"https://www.wikidata.org/wiki/Q461076","display_name":"Dopaminergic","level":3,"score":0.09974586963653564}],"mesh":[{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000368","descriptor_name":"Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001931","descriptor_name":"Brain Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D001931","descriptor_name":"Brain Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D001931","descriptor_name":"Brain Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008875","descriptor_name":"Middle Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008875","descriptor_name":"Middle Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008875","descriptor_name":"Middle Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012012","descriptor_name":"Red Nucleus","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D012012","descriptor_name":"Red Nucleus","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D012012","descriptor_name":"Red Nucleus","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D012815","descriptor_name":"Signal Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012815","descriptor_name":"Signal Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012815","descriptor_name":"Signal Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013378","descriptor_name":"Substantia Nigra","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D013378","descriptor_name":"Substantia Nigra","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D013378","descriptor_name":"Substantia Nigra","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D020531","descriptor_name":"Subthalamic Nucleus","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D020531","descriptor_name":"Subthalamic Nucleus","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D020531","descriptor_name":"Subthalamic Nucleus","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D055815","descriptor_name":"Young Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055815","descriptor_name":"Young Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055815","descriptor_name":"Young Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1016/j.neuroimage.2016.06.039","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.neuroimage.2016.06.039","pdf_url":null,"source":{"id":"https://openalex.org/S103225281","display_name":"NeuroImage","issn_l":"1053-8119","issn":["1053-8119","1095-9572"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"NeuroImage","raw_type":"journal-article"},{"id":"pmid:27349329","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27349329","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"NeuroImage","raw_type":null},{"id":"pmh:oai:dare.uva.nl:openaire_cris_publications/5306c534-64e2-49b1-807b-1d2193c85378","is_oa":true,"landing_page_url":"https://handle.uba.uva.nl/personal/pure/en/publications/automated-segmentation-of-the-substantia-nigra-subthalamic-nucleus-and-red-nucleus-in-7t-data-at-young-and-old-age(5306c534-64e2-49b1-807b-1d2193c85378).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400088","display_name":"UvA-DARE (University of Amsterdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I887064364","host_organization_name":"University of Amsterdam","host_organization_lineage":["https://openalex.org/I887064364"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Visser, E, Keuken, M C, Forstmann, B U & Jenkinson, M 2016, 'Automated segmentation of the substantia nigra, subthalamic nucleus and red nucleus in 7T data at young and old age', NeuroImage, vol. 139, pp. 324-336. https://doi.org/10.1016/j.neuroimage.2016.06.039","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/256305","is_oa":true,"landing_page_url":"http://hdl.handle.net/11343/256305","pdf_url":"http://hdl.handle.net/11343/256305","source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:dare.uva.nl:publications/5306c534-64e2-49b1-807b-1d2193c85378","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306400088","display_name":"UvA-DARE (University of Amsterdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I887064364","host_organization_name":"University of Amsterdam","host_organization_lineage":["https://openalex.org/I887064364"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:dare.uva.nl:publications/5306c534-64e2-49b1-807b-1d2193c85378","is_oa":true,"landing_page_url":"https://hdl.handle.net/11245.1/5306c534-64e2-49b1-807b-1d2193c85378","pdf_url":null,"source":{"id":"https://openalex.org/S4306400088","display_name":"UvA-DARE (University of Amsterdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I887064364","host_organization_name":"University of Amsterdam","host_organization_lineage":["https://openalex.org/I887064364"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Visser, E, Keuken, M C, Forstmann, B U & Jenkinson, M 2016, 'Automated segmentation of the substantia nigra, subthalamic nucleus and red nucleus in 7T data at young and old age', NeuroImage, vol. 139, pp. 324-336. https://doi.org/10.1016/j.neuroimage.2016.06.039","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:ora.ox.ac.uk:uuid:dcda3c62-2607-449b-8e33-015ede11e318","is_oa":true,"landing_page_url":"https://ora.ox.ac.uk/objects/uuid:dcda3c62-2607-449b-8e33-015ede11e318","pdf_url":null,"source":{"id":"https://openalex.org/S4306402636","display_name":"Oxford University Research Archive (ORA) (University of Oxford)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I40120149","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/I40120149"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Symplectic Elements at Oxford","raw_type":"Journal article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4988791","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4988791","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Neuroimage","raw_type":"Text"},{"id":"pmh:uvapub:oai:dare.uva.nl:publications/5306c534-64e2-49b1-807b-1d2193c85378","is_oa":true,"landing_page_url":"https://dare.uva.nl/personal/pure/en/publications/automated-segmentation-of-the-substantia-nigra-subthalamic-nucleus-and-red-nucleus-in-7t-data-at-young-and-old-age(5306c534-64e2-49b1-807b-1d2193c85378).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"NeuroImage, 139, 324 - 336. Academic Press Inc.","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1016/j.neuroimage.2016.06.039","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.neuroimage.2016.06.039","pdf_url":null,"source":{"id":"https://openalex.org/S103225281","display_name":"NeuroImage","issn_l":"1053-8119","issn":["1053-8119","1095-9572"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"NeuroImage","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.47999998927116394,"display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G2932396496","display_name":null,"funder_award_id":"098369/Z/12/Z","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G5263876364","display_name":null,"funder_award_id":"098369/Z/12/Z","funder_id":"https://openalex.org/F4320307874","funder_display_name":"Wellcome"},{"id":"https://openalex.org/G8098719046","display_name":null,"funder_award_id":"313481","funder_id":"https://openalex.org/F4320334678","funder_display_name":"European Research Council"}],"funders":[{"id":"https://openalex.org/F4320307874","display_name":"Wellcome","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320334678","display_name":"European Research Council","ror":"https://ror.org/0472cxd90"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":53,"referenced_works":["https://openalex.org/W81224298","https://openalex.org/W1542557450","https://openalex.org/W1554544485","https://openalex.org/W1981835221","https://openalex.org/W1983083967","https://openalex.org/W1987869189","https://openalex.org/W2010605130","https://openalex.org/W2010754167","https://openalex.org/W2014161303","https://openalex.org/W2021782736","https://openalex.org/W2045116961","https://openalex.org/W2046557060","https://openalex.org/W2047461048","https://openalex.org/W2049018094","https://openalex.org/W2050900769","https://openalex.org/W2052204796","https://openalex.org/W2052644075","https://openalex.org/W2054348646","https://openalex.org/W2061644128","https://openalex.org/W2064206300","https://openalex.org/W2072579321","https://openalex.org/W2074616189","https://openalex.org/W2076256291","https://openalex.org/W2089940272","https://openalex.org/W2091422377","https://openalex.org/W2091839728","https://openalex.org/W2097681414","https://openalex.org/W2105552075","https://openalex.org/W2115505856","https://openalex.org/W2116294955","https://openalex.org/W2124026957","https://openalex.org/W2125343815","https://openalex.org/W2126693856","https://openalex.org/W2128017834","https://openalex.org/W2129503911","https://openalex.org/W2132562673","https://openalex.org/W2136360212","https://openalex.org/W2136573752","https://openalex.org/W2136758448","https://openalex.org/W2146336531","https://openalex.org/W2148726987","https://openalex.org/W2150298956","https://openalex.org/W2156840897","https://openalex.org/W2182176314","https://openalex.org/W2282104624","https://openalex.org/W2328435466","https://openalex.org/W2337910827","https://openalex.org/W2587446674","https://openalex.org/W4235770099","https://openalex.org/W4285719527","https://openalex.org/W6603220474","https://openalex.org/W6685926473","https://openalex.org/W6703538350"],"related_works":["https://openalex.org/W2026575585","https://openalex.org/W1964442944","https://openalex.org/W1972030906","https://openalex.org/W49240957","https://openalex.org/W1964322678","https://openalex.org/W2426768808","https://openalex.org/W2016033585","https://openalex.org/W2964460082","https://openalex.org/W2089150464","https://openalex.org/W1974878974"],"abstract_inverted_index":{"With":[0],"recent":[1],"developments":[2],"in":[3,35,43,109,137,159],"MR":[4],"acquisition":[5],"at":[6,152],"7T,":[7],"smaller":[8,84],"brainstem":[9],"structures":[10,30,142],"such":[11,45],"as":[12,46,154,156],"the":[13,36,39,74,88,116,138,141,148],"red":[14],"nuclei,":[15],"substantia":[16],"nigra":[17],"and":[18,27,42,76,83,113,143],"subthalamic":[19],"nuclei":[20],"can":[21],"be":[22,151],"imaged":[23],"with":[24,124,135],"good":[25],"contrast":[26],"resolution.":[28],"These":[29],"have":[31,52,68],"important":[32],"roles":[33],"both":[34],"study":[37],"of":[38,73,140],"healthy":[40],"brain":[41],"diseases":[44],"Parkinson's":[47],"disease,":[48],"but":[49],"few":[50],"methods":[51],"been":[53],"described":[54],"to":[55,79,90,132],"automatically":[56],"segment":[57,80],"them.":[58],"In":[59],"this":[60],"paper,":[61],"we":[62,67],"extend":[63],"a":[64,100,129],"method":[65,89,117,149],"that":[66,115,121,147],"previously":[69],"proposed":[70],"for":[71],"segmentation":[72,96,107],"striatum":[75],"globus":[77],"pallidus":[78],"these":[81],"deeper":[82],"structures.":[85],"We":[86,105,127],"modify":[87],"allow":[91],"more":[92],"direct":[93],"control":[94],"over":[95],"smoothness":[97],"by":[98],"using":[99],"Markov":[101],"random":[102],"field":[103],"prior.":[104],"investigate":[106],"performance":[108],"three":[110],"age":[111,136],"groups":[112],"show":[114],"produces":[118],"consistent":[119],"results":[120,145],"correspond":[122],"well":[123],"manual":[125,157],"segmentations.":[126],"perform":[128],"vertex-based":[130],"analysis":[131],"identify":[133],"changes":[134],"shape":[139],"present":[144],"suggesting":[146],"may":[150],"least":[153],"effective":[155],"delineation":[158],"capturing":[160],"differences":[161],"between":[162],"subjects.":[163]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
