{"id":"https://openalex.org/W7166842240","doi":"https://doi.org/10.1016/j.neunet.2026.109324","title":"TraNce: Type-aware hypergraph neural network with biological mediators for drug repositioning","display_name":"TraNce: Type-aware hypergraph neural network with biological mediators for drug repositioning","publication_year":2026,"publication_date":"2026-07-01","ids":{"openalex":"https://openalex.org/W7166842240","doi":"https://doi.org/10.1016/j.neunet.2026.109324","pmid":"https://pubmed.ncbi.nlm.nih.gov/42398484"},"language":"en","primary_location":{"id":"doi:10.1016/j.neunet.2026.109324","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.neunet.2026.109324","pdf_url":null,"source":{"id":"https://openalex.org/S123019304","display_name":"Neural Networks","issn_l":"0893-6080","issn":["0893-6080","1879-2782"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neural Networks","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026510859","display_name":"Hai Cui","orcid":"https://orcid.org/0000-0001-8207-7690"},"institutions":[{"id":"https://openalex.org/I43313876","display_name":"Dalian Maritime University","ror":"https://ror.org/002b7nr53","country_code":"CN","type":"education","lineage":["https://openalex.org/I43313876"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hai Cui","raw_affiliation_strings":["College of Information Science and Technology, Dalian Maritime University, Dalian, 116026, Liaoning, China. Electronic address: cuihai@dlmu.edu.cn"],"raw_orcid":"https://orcid.org/0000-0001-8207-7690","affiliations":[{"raw_affiliation_string":"College of Information Science and Technology, Dalian Maritime University, Dalian, 116026, Liaoning, China. Electronic address: cuihai@dlmu.edu.cn","institution_ids":["https://openalex.org/I43313876"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077313299","display_name":"Haijia Bi","orcid":"https://orcid.org/0009-0008-6681-4521"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haijia Bi","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, 130012, Jilin, China. Electronic address: bihj21@mails.jlu.edu.cn"],"raw_orcid":"https://orcid.org/0009-0008-6681-4521","affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, 130012, Jilin, China. Electronic address: bihj21@mails.jlu.edu.cn","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139796742","display_name":"Ren Fu","orcid":"https://orcid.org/0009-0002-6396-9647"},"institutions":[{"id":"https://openalex.org/I43313876","display_name":"Dalian Maritime University","ror":"https://ror.org/002b7nr53","country_code":"CN","type":"education","lineage":["https://openalex.org/I43313876"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ren Fu","raw_affiliation_strings":["College of Information Science and Technology, Dalian Maritime University, Dalian, 116026, Liaoning, China. Electronic address: idlmu20@dlmu.edu.cn"],"raw_orcid":"https://orcid.org/0009-0002-6396-9647","affiliations":[{"raw_affiliation_string":"College of Information Science and Technology, Dalian Maritime University, Dalian, 116026, Liaoning, China. Electronic address: idlmu20@dlmu.edu.cn","institution_ids":["https://openalex.org/I43313876"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071380339","display_name":"Xingang Wang","orcid":"https://orcid.org/0009-0000-2668-0997"},"institutions":[{"id":"https://openalex.org/I43313876","display_name":"Dalian Maritime University","ror":"https://ror.org/002b7nr53","country_code":"CN","type":"education","lineage":["https://openalex.org/I43313876"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xingang Wang","raw_affiliation_strings":["College of Artificial Intelligence, Dalian Maritime University, Dalian, 116026, Liaoning, China. Electronic address: xgwang1228@dlmu.edu.cn"],"raw_orcid":"https://orcid.org/0009-0000-2668-0997","affiliations":[{"raw_affiliation_string":"College of Artificial Intelligence, Dalian Maritime University, Dalian, 116026, Liaoning, China. Electronic address: xgwang1228@dlmu.edu.cn","institution_ids":["https://openalex.org/I43313876"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034008160","display_name":"Meiyu Duan","orcid":"https://orcid.org/0000-0001-7171-2695"},"institutions":[{"id":"https://openalex.org/I43313876","display_name":"Dalian Maritime University","ror":"https://ror.org/002b7nr53","country_code":"CN","type":"education","lineage":["https://openalex.org/I43313876"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Meiyu Duan","raw_affiliation_strings":["College of Information Science and Technology, Dalian Maritime University, Dalian, 116026, Liaoning, China. Electronic address: duanmy@dlmu.edu.cn"],"raw_orcid":"https://orcid.org/0000-0001-7171-2695","affiliations":[{"raw_affiliation_string":"College of Information Science and Technology, Dalian Maritime University, Dalian, 116026, Liaoning, China. Electronic address: duanmy@dlmu.edu.cn","institution_ids":["https://openalex.org/I43313876"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5046020427","display_name":"Yijia Zhang","orcid":"https://orcid.org/0000-0002-5843-4675"},"institutions":[{"id":"https://openalex.org/I43313876","display_name":"Dalian Maritime University","ror":"https://ror.org/002b7nr53","country_code":"CN","type":"education","lineage":["https://openalex.org/I43313876"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yijia Zhang","raw_affiliation_strings":["College of Information Science and Technology, Dalian Maritime University, Dalian, 116026, Liaoning, China. Electronic address: zhangyijia@dlmu.edu.cn"],"raw_orcid":"https://orcid.org/0000-0002-5843-4675","affiliations":[{"raw_affiliation_string":"College of Information Science and Technology, Dalian Maritime University, Dalian, 116026, Liaoning, China. Electronic address: zhangyijia@dlmu.edu.cn","institution_ids":["https://openalex.org/I43313876"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5034008160","https://openalex.org/A5046020427"],"corresponding_institution_ids":["https://openalex.org/I43313876"],"apc_list":{"value":3350,"currency":"USD","value_usd":3350},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.84194997,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"204","issue":null,"first_page":"109324","last_page":"109324"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.4325999915599823,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.4325999915599823,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.12030000239610672,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.05950000137090683,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.6193000078201294},{"id":"https://openalex.org/keywords/hypergraph","display_name":"Hypergraph","score":0.5699999928474426},{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.5267000198364258},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.39309999346733093},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.2897000014781952}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6536999940872192},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6456999778747559},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.6193000078201294},{"id":"https://openalex.org/C2781221856","wikidata":"https://www.wikidata.org/wiki/Q840247","display_name":"Hypergraph","level":2,"score":0.5699999928474426},{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.5267000198364258},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.39309999346733093},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.299699991941452},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.2897000014781952},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.2865999937057495},{"id":"https://openalex.org/C812465","wikidata":"https://www.wikidata.org/wiki/Q5058375","display_name":"Cellular neural network","level":3,"score":0.2612999975681305}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1016/j.neunet.2026.109324","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.neunet.2026.109324","pdf_url":null,"source":{"id":"https://openalex.org/S123019304","display_name":"Neural Networks","issn_l":"0893-6080","issn":["0893-6080","1879-2782"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neural Networks","raw_type":"journal-article"},{"id":"pmid:42398484","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42398484","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Neural networks : the official journal of the International Neural Network Society","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W1971028729","https://openalex.org/W2019732828","https://openalex.org/W2070081349","https://openalex.org/W3020759564","https://openalex.org/W3046419426","https://openalex.org/W3212259269","https://openalex.org/W3212664589","https://openalex.org/W4282926996","https://openalex.org/W4289656533","https://openalex.org/W4296639080","https://openalex.org/W4308690706","https://openalex.org/W4318983406","https://openalex.org/W4323644096","https://openalex.org/W4327550249","https://openalex.org/W4328127348","https://openalex.org/W4366824201","https://openalex.org/W4366986540","https://openalex.org/W4378952262","https://openalex.org/W4383503935","https://openalex.org/W4386471919","https://openalex.org/W4387363909","https://openalex.org/W4388663703","https://openalex.org/W4389132751","https://openalex.org/W4389331644","https://openalex.org/W4389525220","https://openalex.org/W4390331481","https://openalex.org/W4390640372","https://openalex.org/W4390660447","https://openalex.org/W4390967218","https://openalex.org/W4391005764","https://openalex.org/W4399466894","https://openalex.org/W4399940476","https://openalex.org/W4400347934","https://openalex.org/W4400391364","https://openalex.org/W4400616842","https://openalex.org/W4401357820","https://openalex.org/W4403616304","https://openalex.org/W4404726166","https://openalex.org/W4405541844","https://openalex.org/W4406633314","https://openalex.org/W4406657788","https://openalex.org/W4407829778","https://openalex.org/W4409325823","https://openalex.org/W4409348409","https://openalex.org/W4410536383","https://openalex.org/W4413967980","https://openalex.org/W4416365729"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2026-07-02T00:00:00"}
