{"id":"https://openalex.org/W4402669040","doi":"https://doi.org/10.1016/j.media.2024.103354","title":"DeepResBat: Deep residual batch harmonization accounting for covariate distribution differences","display_name":"DeepResBat: Deep residual batch harmonization accounting for covariate distribution differences","publication_year":2024,"publication_date":"2024-09-20","ids":{"openalex":"https://openalex.org/W4402669040","doi":"https://doi.org/10.1016/j.media.2024.103354","pmid":"https://pubmed.ncbi.nlm.nih.gov/39368279"},"language":"en","primary_location":{"id":"doi:10.1016/j.media.2024.103354","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.media.2024.103354","pdf_url":null,"source":{"id":"https://openalex.org/S116571295","display_name":"Medical Image Analysis","issn_l":"1361-8415","issn":["1361-8415","1361-8423","1361-8431"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Image Analysis","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1016/j.media.2024.103354","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001213005","display_name":"Lijun An","orcid":"https://orcid.org/0000-0003-1030-4625"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I4210150261","display_name":"National University Health System","ror":"https://ror.org/05tjjsh18","country_code":"SG","type":"education","lineage":["https://openalex.org/I4210150261"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Lijun An","raw_affiliation_strings":["Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0003-1030-4625","affiliations":[{"raw_affiliation_string":"Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596","https://openalex.org/I4210150261"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Chen Zhang","orcid":"https://orcid.org/0000-0002-1579-0047"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I4210150261","display_name":"National University Health System","ror":"https://ror.org/05tjjsh18","country_code":"SG","type":"education","lineage":["https://openalex.org/I4210150261"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Chen Zhang","raw_affiliation_strings":["Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0002-1579-0047","affiliations":[{"raw_affiliation_string":"Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596","https://openalex.org/I4210150261"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073011817","display_name":"Naren Wulan","orcid":"https://orcid.org/0009-0005-3974-7528"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I4210150261","display_name":"National University Health System","ror":"https://ror.org/05tjjsh18","country_code":"SG","type":"education","lineage":["https://openalex.org/I4210150261"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Naren Wulan","raw_affiliation_strings":["Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596","https://openalex.org/I4210150261"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026124197","display_name":"Shaoshi Zhang","orcid":"https://orcid.org/0000-0002-6352-9150"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I4210150261","display_name":"National University Health System","ror":"https://ror.org/05tjjsh18","country_code":"SG","type":"education","lineage":["https://openalex.org/I4210150261"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Shaoshi Zhang","raw_affiliation_strings":["Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0002-6352-9150","affiliations":[{"raw_affiliation_string":"Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596","https://openalex.org/I4210150261"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030876164","display_name":"Pansheng Chen","orcid":"https://orcid.org/0009-0009-8881-8643"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I4210150261","display_name":"National University Health System","ror":"https://ror.org/05tjjsh18","country_code":"SG","type":"education","lineage":["https://openalex.org/I4210150261"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Pansheng Chen","raw_affiliation_strings":["Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore"],"raw_orcid":"https://orcid.org/0009-0009-8881-8643","affiliations":[{"raw_affiliation_string":"Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596","https://openalex.org/I4210150261"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Fang Ji","orcid":"https://orcid.org/0000-0002-7471-0115"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Fang Ji","raw_affiliation_strings":["Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0002-7471-0115","affiliations":[{"raw_affiliation_string":"Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074361009","display_name":"Kwun Kei Ng","orcid":"https://orcid.org/0000-0002-0584-7679"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Kwun Kei Ng","raw_affiliation_strings":["Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0002-0584-7679","affiliations":[{"raw_affiliation_string":"Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022789521","display_name":"Christopher Chen","orcid":"https://orcid.org/0000-0002-1047-9225"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Christopher Chen","raw_affiliation_strings":["Department of Pharmacology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0002-1047-9225","affiliations":[{"raw_affiliation_string":"Department of Pharmacology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032992099","display_name":"Juan Zhou","orcid":"https://orcid.org/0000-0002-0180-8648"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Juan Helen Zhou","raw_affiliation_strings":["Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore, Singapore"],"raw_orcid":"https://orcid.org/0000-0002-0180-8648","affiliations":[{"raw_affiliation_string":"Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016198416","display_name":"B.T. Thomas Yeo","orcid":"https://orcid.org/0000-0002-0119-3276"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I4210150261","display_name":"National University Health System","ror":"https://ror.org/05tjjsh18","country_code":"SG","type":"education","lineage":["https://openalex.org/I4210150261"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"B.T. Thomas Yeo","raw_affiliation_strings":["Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore, Singapore; Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA. Electronic address: thomas.yeo@nus.edu.sg"],"raw_orcid":"https://orcid.org/0000-0002-0119-3276","affiliations":[{"raw_affiliation_string":"Centre for Sleep and Cognition & Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; Department of Medicine, Healthy Longevity Translational Research Programme, Human Potential Translational Research Programme & Institute for Digital Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health, National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore, Singapore; Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA. Electronic address: thomas.yeo@nus.edu.sg","institution_ids":["https://openalex.org/I165932596","https://openalex.org/I4210150261"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5001213005"],"corresponding_institution_ids":["https://openalex.org/I165932596","https://openalex.org/I4210150261"],"apc_list":{"value":3970,"currency":"USD","value_usd":3970},"apc_paid":{"value":3970,"currency":"USD","value_usd":3970},"fwci":3.8717,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.93843456,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"99","issue":null,"first_page":"103354","last_page":"103354"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11885","display_name":"MRI in cancer diagnosis","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/covariate","display_name":"Covariate","score":0.9605626463890076},{"id":"https://openalex.org/keywords/harmonization","display_name":"Harmonization","score":0.5796195268630981},{"id":"https://openalex.org/keywords/pooling","display_name":"Pooling","score":0.5758882761001587},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5319414734840393},{"id":"https://openalex.org/keywords/regression","display_name":"Regression","score":0.4883544147014618},{"id":"https://openalex.org/keywords/econometrics","display_name":"Econometrics","score":0.46882790327072144},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.4582037925720215},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4436458647251129},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.299817830324173},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.22442758083343506}],"concepts":[{"id":"https://openalex.org/C119043178","wikidata":"https://www.wikidata.org/wiki/Q320723","display_name":"Covariate","level":2,"score":0.9605626463890076},{"id":"https://openalex.org/C2779962950","wikidata":"https://www.wikidata.org/wiki/Q5659376","display_name":"Harmonization","level":2,"score":0.5796195268630981},{"id":"https://openalex.org/C70437156","wikidata":"https://www.wikidata.org/wiki/Q7228652","display_name":"Pooling","level":2,"score":0.5758882761001587},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5319414734840393},{"id":"https://openalex.org/C83546350","wikidata":"https://www.wikidata.org/wiki/Q1139051","display_name":"Regression","level":2,"score":0.4883544147014618},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.46882790327072144},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.4582037925720215},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4436458647251129},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.299817830324173},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.22442758083343506},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.media.2024.103354","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.media.2024.103354","pdf_url":null,"source":{"id":"https://openalex.org/S116571295","display_name":"Medical Image Analysis","issn_l":"1361-8415","issn":["1361-8415","1361-8423","1361-8431"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Image Analysis","raw_type":"journal-article"},{"id":"pmid:39368279","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39368279","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical image analysis","raw_type":null}],"best_oa_location":{"id":"doi:10.1016/j.media.2024.103354","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.media.2024.103354","pdf_url":null,"source":{"id":"https://openalex.org/S116571295","display_name":"Medical Image Analysis","issn_l":"1361-8415","issn":["1361-8415","1361-8423","1361-8431"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Medical Image Analysis","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320330576","display_name":"Temasek Foundation","ror":null},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":78,"referenced_works":["https://openalex.org/W1980553836","https://openalex.org/W2004293194","https://openalex.org/W2012059337","https://openalex.org/W2013596835","https://openalex.org/W2020519533","https://openalex.org/W2045997031","https://openalex.org/W2078524519","https://openalex.org/W2084451675","https://openalex.org/W2086967335","https://openalex.org/W2092496538","https://openalex.org/W2101135654","https://openalex.org/W2103030628","https://openalex.org/W2107665951","https://openalex.org/W2109140840","https://openalex.org/W2115799070","https://openalex.org/W2124201592","https://openalex.org/W2134305330","https://openalex.org/W2159529587","https://openalex.org/W2188365844","https://openalex.org/W2193791265","https://openalex.org/W2222512263","https://openalex.org/W2328932654","https://openalex.org/W2580087858","https://openalex.org/W2755032587","https://openalex.org/W2762078336","https://openalex.org/W2806232800","https://openalex.org/W2811386582","https://openalex.org/W2888149555","https://openalex.org/W2893411620","https://openalex.org/W2914874661","https://openalex.org/W2922795675","https://openalex.org/W2923715522","https://openalex.org/W2950030754","https://openalex.org/W2950086191","https://openalex.org/W2961602927","https://openalex.org/W2970275262","https://openalex.org/W2993515580","https://openalex.org/W3006047402","https://openalex.org/W3013377280","https://openalex.org/W3015083995","https://openalex.org/W3039553495","https://openalex.org/W3042427971","https://openalex.org/W3126221909","https://openalex.org/W3157186248","https://openalex.org/W3167322081","https://openalex.org/W3192152300","https://openalex.org/W3197863729","https://openalex.org/W3199619903","https://openalex.org/W3203233031","https://openalex.org/W3216660278","https://openalex.org/W4200060838","https://openalex.org/W4200607414","https://openalex.org/W4220838968","https://openalex.org/W4225246927","https://openalex.org/W4280505354","https://openalex.org/W4288723200","https://openalex.org/W4288860568","https://openalex.org/W4294919497","https://openalex.org/W4295916002","https://openalex.org/W4295940597","https://openalex.org/W4304893033","https://openalex.org/W4312037162","https://openalex.org/W4313172816","https://openalex.org/W4323980879","https://openalex.org/W4362674168","https://openalex.org/W4366494274","https://openalex.org/W4379660374","https://openalex.org/W4384924424","https://openalex.org/W4400406953","https://openalex.org/W4401029899","https://openalex.org/W6687045409","https://openalex.org/W6756040250","https://openalex.org/W6769029353","https://openalex.org/W6774974939","https://openalex.org/W6796335517","https://openalex.org/W6802385673","https://openalex.org/W6859145153","https://openalex.org/W6910681941"],"related_works":["https://openalex.org/W2953234277","https://openalex.org/W2626256601","https://openalex.org/W147410782","https://openalex.org/W2900413183","https://openalex.org/W3022252430","https://openalex.org/W4390975304","https://openalex.org/W4287804464","https://openalex.org/W3103989898","https://openalex.org/W3211292372","https://openalex.org/W803346624"],"abstract_inverted_index":{"Pooling":[0],"MRI":[1,208],"data":[2],"from":[3,164],"multiple":[4],"datasets":[5,163],"requires":[6],"harmonization":[7,23,48,97,220],"to":[8,89,157,242],"reduce":[9],"undesired":[10],"inter-site":[11],"variabilities,":[12],"while":[13,195],"preserving":[14],"effects":[15,137,153,198],"of":[16,111,138,170,191,199,225],"biological":[17,197],"variables":[18],"(or":[19],"covariates).":[20],"The":[21,104],"popular":[22],"approach":[24,106],"ComBat":[25],"uses":[26],"a":[27,108,127,168],"mixed":[28],"effect":[29],"regression":[30,142],"framework":[31,129],"that":[32,82,180,234],"explicitly":[33,68],"accounts":[34],"for":[35,70,85,245],"covariate":[36,71,99,152],"distribution":[37,72],"differences":[38,73,148],"across":[39,74],"datasets.":[40,75],"There":[41],"is":[42,107,236],"also":[43],"significant":[44],"interest":[45],"in":[46,189],"developing":[47],"approaches":[49,65,221],"based":[50],"on":[51],"deep":[52,239],"neural":[53],"networks":[54],"(DNNs),":[55],"such":[56],"as":[57],"conditional":[58],"variational":[59],"autoencoder":[60],"(cVAE).":[61],"However,":[62,201],"current":[63],"DNN":[64],"do":[66],"not":[67,83],"account":[69],"Here,":[76],"we":[77,178],"provide":[78],"mathematical":[79],"results,":[80],"suggesting":[81],"accounting":[84],"covariates":[86,115,139,210],"can":[87,247],"lead":[88],"suboptimal":[90],"harmonization.":[91],"We":[92],"propose":[93],"two":[94],"DNN-based":[95,219],"covariate-aware":[96],"approaches:":[98],"VAE":[100],"(coVAE)":[101],"and":[102,116,121,173,182,187,209],"DeepResBat.":[103],"coVAE":[105,183,202],"natural":[109],"extension":[110],"cVAE":[112,188],"by":[113,131,145],"concatenating":[114],"site":[117,147],"information":[118],"with":[119,140,149,167],"site-":[120],"covariate-invariant":[122],"latent":[123],"representations.":[124],"DeepResBat":[125,133,181,235,246],"adopts":[126],"residual":[128],"inspired":[130],"ComBat.":[132,243],"first":[134],"removes":[135],"the":[136,158],"nonlinear":[141],"trees,":[143],"followed":[144],"eliminating":[146],"cVAE.":[150],"Finally,":[151],"are":[154],"added":[155],"back":[156],"harmonized":[159],"residuals.":[160],"Using":[161],"three":[162,165],"continents":[166],"total":[169],"2787":[171],"participants":[172],"10,085":[174],"anatomical":[175,207],"T1":[176],"scans,":[177],"find":[179],"outperformed":[184],"ComBat,":[185],"CovBat":[186],"terms":[190],"removing":[192],"dataset":[193],"differences,":[194],"enhancing":[196],"interest.":[200],"hallucinates":[203],"spurious":[204],"associations":[205],"between":[206],"even":[211],"when":[212],"no":[213],"association":[214],"exists.":[215],"Future":[216],"studies":[217],"proposing":[218],"should":[222],"be":[223,248],"aware":[224],"this":[226],"false":[227],"positive":[228],"pitfall.":[229],"Overall,":[230],"our":[231],"results":[232],"suggest":[233],"an":[237],"effective":[238],"learning":[240],"alternative":[241],"Code":[244],"found":[249],"here:":[250],"https://github.com/ThomasYeoLab/CBIG/tree/master/stable_projects/harmonization/An2024_DeepResBat.":[251]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":1}],"updated_date":"2026-05-11T08:15:01.531666","created_date":"2025-10-10T00:00:00"}
