{"id":"https://openalex.org/W7139970943","doi":"https://doi.org/10.1016/j.knosys.2026.115838","title":"CASE-TCR: Content aware and sparse selection attention driven learning framework for pan-cancer prediction using T-cell receptor sequences","display_name":"CASE-TCR: Content aware and sparse selection attention driven learning framework for pan-cancer prediction using T-cell receptor sequences","publication_year":2026,"publication_date":"2026-03-21","ids":{"openalex":"https://openalex.org/W7139970943","doi":"https://doi.org/10.1016/j.knosys.2026.115838"},"language":"en","primary_location":{"id":"doi:10.1016/j.knosys.2026.115838","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.knosys.2026.115838","pdf_url":null,"source":{"id":"https://openalex.org/S10169007","display_name":"Knowledge-Based Systems","issn_l":"0950-7051","issn":["0950-7051","1872-7409"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Knowledge-Based Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5130280099","display_name":"Diandian Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I70908550","display_name":"Anhui Polytechnic University","ror":"https://ror.org/041sj0284","country_code":"CN","type":"education","lineage":["https://openalex.org/I70908550"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Diandian Wang","raw_affiliation_strings":["College of Computer and Information, Anhui Polytechnic University, Wuhu, China"],"raw_orcid":"https://orcid.org/0009-0009-8967-9243","affiliations":[{"raw_affiliation_string":"College of Computer and Information, Anhui Polytechnic University, Wuhu, China","institution_ids":["https://openalex.org/I70908550"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5130289468","display_name":"Tong Jin","orcid":null},"institutions":[{"id":"https://openalex.org/I70908550","display_name":"Anhui Polytechnic University","ror":"https://ror.org/041sj0284","country_code":"CN","type":"education","lineage":["https://openalex.org/I70908550"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tong Jin","raw_affiliation_strings":["College of Computer and Information, Anhui Polytechnic University, Wuhu, China"],"raw_orcid":"https://orcid.org/0009-0002-5310-0374","affiliations":[{"raw_affiliation_string":"College of Computer and Information, Anhui Polytechnic University, Wuhu, China","institution_ids":["https://openalex.org/I70908550"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064039971","display_name":"Guoliang Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I70908550","display_name":"Anhui Polytechnic University","ror":"https://ror.org/041sj0284","country_code":"CN","type":"education","lineage":["https://openalex.org/I70908550"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guoliang Wang","raw_affiliation_strings":["College of Computer and Information, Anhui Polytechnic University, Wuhu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer and Information, Anhui Polytechnic University, Wuhu, China","institution_ids":["https://openalex.org/I70908550"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Shuai Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I70908550","display_name":"Anhui Polytechnic University","ror":"https://ror.org/041sj0284","country_code":"CN","type":"education","lineage":["https://openalex.org/I70908550"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Shuai Liu","raw_affiliation_strings":["College of Computer and Information, Anhui Polytechnic University, Wuhu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer and Information, Anhui Polytechnic University, Wuhu, China","institution_ids":["https://openalex.org/I70908550"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Shuai Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I70908550","display_name":"Anhui Polytechnic University","ror":"https://ror.org/041sj0284","country_code":"CN","type":"education","lineage":["https://openalex.org/I70908550"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuai Liu","raw_affiliation_strings":["College of Computer and Information, Anhui Polytechnic University, Wuhu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer and Information, Anhui Polytechnic University, Wuhu, China","institution_ids":["https://openalex.org/I70908550"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5130278895","display_name":"Kun Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I70908550","display_name":"Anhui Polytechnic University","ror":"https://ror.org/041sj0284","country_code":"CN","type":"education","lineage":["https://openalex.org/I70908550"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kun Wang","raw_affiliation_strings":["College of Computer and Information, Anhui Polytechnic University, Wuhu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer and Information, Anhui Polytechnic University, Wuhu, China","institution_ids":["https://openalex.org/I70908550"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Dianlin Hu","orcid":null},"institutions":[{"id":"https://openalex.org/I14243506","display_name":"Hong Kong Polytechnic University","ror":"https://ror.org/0030zas98","country_code":"HK","type":"education","lineage":["https://openalex.org/I14243506"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Dianlin Hu","raw_affiliation_strings":["The Department of Health Technology and Informatics, Hong Kong Polytechnic University, Hong Kong, SAR, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Department of Health Technology and Informatics, Hong Kong Polytechnic University, Hong Kong, SAR, China","institution_ids":["https://openalex.org/I14243506"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Jin Liu","orcid":"https://orcid.org/0000-0003-1884-671X"},"institutions":[{"id":"https://openalex.org/I70908550","display_name":"Anhui Polytechnic University","ror":"https://ror.org/041sj0284","country_code":"CN","type":"education","lineage":["https://openalex.org/I70908550"]},{"id":"https://openalex.org/I76569877","display_name":"Southeast University","ror":"https://ror.org/04ct4d772","country_code":"CN","type":"education","lineage":["https://openalex.org/I76569877"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jin Liu","raw_affiliation_strings":["College of Computer and Information, Anhui Polytechnic University, Wuhu, China","Key Laboratory of Computer Network and Information Integration (Southeast University) Ministry of Education Nanjing, China"],"raw_orcid":"https://orcid.org/0000-0003-1884-671X","affiliations":[{"raw_affiliation_string":"College of Computer and Information, Anhui Polytechnic University, Wuhu, China","institution_ids":["https://openalex.org/I70908550"]},{"raw_affiliation_string":"Key Laboratory of Computer Network and Information Integration (Southeast University) Ministry of Education Nanjing, China","institution_ids":["https://openalex.org/I76569877"]}]},{"author_position":"last","author":{"id":null,"display_name":"Xilin Liu","orcid":"https://orcid.org/0000-0002-1136-6783"},"institutions":[{"id":"https://openalex.org/I9086337","display_name":"Taiyuan University of Technology","ror":"https://ror.org/03kv08d37","country_code":"CN","type":"education","lineage":["https://openalex.org/I9086337"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xilin Liu","raw_affiliation_strings":["College of Artificial Intelligence, Taiyuan University of Technology, Taiyuan, China"],"raw_orcid":"https://orcid.org/0000-0002-1136-6783","affiliations":[{"raw_affiliation_string":"College of Artificial Intelligence, Taiyuan University of Technology, Taiyuan, China","institution_ids":["https://openalex.org/I9086337"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I70908550","https://openalex.org/I76569877","https://openalex.org/I9086337"],"apc_list":{"value":3130,"currency":"USD","value_usd":3130},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.27367023,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"341","issue":null,"first_page":"115838","last_page":"115838"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.48750001192092896,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.48750001192092896,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10158","display_name":"Cancer Immunotherapy and Biomarkers","score":0.18970000743865967,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.040800001472234726,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.5645999908447266},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4839000105857849},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.4521999955177307},{"id":"https://openalex.org/keywords/generalizability-theory","display_name":"Generalizability theory","score":0.4383000135421753},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.3977999985218048},{"id":"https://openalex.org/keywords/data-driven","display_name":"Data-driven","score":0.3531999886035919},{"id":"https://openalex.org/keywords/encoder","display_name":"Encoder","score":0.34389999508857727},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.3416000008583069},{"id":"https://openalex.org/keywords/predictive-modelling","display_name":"Predictive modelling","score":0.322299987077713}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7329000234603882},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6484000086784363},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.621399998664856},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.5645999908447266},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4839000105857849},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.4521999955177307},{"id":"https://openalex.org/C27158222","wikidata":"https://www.wikidata.org/wiki/Q5532422","display_name":"Generalizability theory","level":2,"score":0.4383000135421753},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.3977999985218048},{"id":"https://openalex.org/C2780440489","wikidata":"https://www.wikidata.org/wiki/Q5227278","display_name":"Data-driven","level":2,"score":0.3531999886035919},{"id":"https://openalex.org/C118505674","wikidata":"https://www.wikidata.org/wiki/Q42586063","display_name":"Encoder","level":2,"score":0.34389999508857727},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.3416000008583069},{"id":"https://openalex.org/C45804977","wikidata":"https://www.wikidata.org/wiki/Q7239673","display_name":"Predictive modelling","level":2,"score":0.322299987077713},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.30059999227523804},{"id":"https://openalex.org/C152565575","wikidata":"https://www.wikidata.org/wiki/Q1124538","display_name":"Conditional random field","level":2,"score":0.29280000925064087},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.29100000858306885},{"id":"https://openalex.org/C2777002142","wikidata":"https://www.wikidata.org/wiki/Q5031432","display_name":"Cancer biomarkers","level":3,"score":0.29100000858306885},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.28679999709129333},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.28610000014305115},{"id":"https://openalex.org/C136389625","wikidata":"https://www.wikidata.org/wiki/Q334384","display_name":"Supervised learning","level":3,"score":0.2858999967575073},{"id":"https://openalex.org/C22367795","wikidata":"https://www.wikidata.org/wiki/Q7625208","display_name":"Structured prediction","level":2,"score":0.28540000319480896},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.2847000062465668},{"id":"https://openalex.org/C93959086","wikidata":"https://www.wikidata.org/wiki/Q6888345","display_name":"Model selection","level":2,"score":0.2777000069618225},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.26409998536109924},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.2639000117778778},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.26260000467300415},{"id":"https://openalex.org/C166109690","wikidata":"https://www.wikidata.org/wiki/Q4677422","display_name":"Action selection","level":3,"score":0.2554999887943268},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.2524999976158142}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1016/j.knosys.2026.115838","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.knosys.2026.115838","pdf_url":null,"source":{"id":"https://openalex.org/S10169007","display_name":"Knowledge-Based Systems","issn_l":"0950-7051","issn":["0950-7051","1872-7409"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Knowledge-Based Systems","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6592847144","display_name":null,"funder_award_id":"T2225025","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G803766650","display_name":null,"funder_award_id":"62401011","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8424146065","display_name":null,"funder_award_id":"2308085MF220","funder_id":"https://openalex.org/F4320334897","funder_display_name":"Natural Science Foundation of Anhui Province"},{"id":"https://openalex.org/G8685294622","display_name":null,"funder_award_id":"62401134","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320334897","display_name":"Natural Science Foundation of Anhui Province","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":46,"referenced_works":["https://openalex.org/W1971654961","https://openalex.org/W2119910794","https://openalex.org/W2368915317","https://openalex.org/W2734881930","https://openalex.org/W2901850955","https://openalex.org/W2963769245","https://openalex.org/W2994162553","https://openalex.org/W3020331344","https://openalex.org/W3063526921","https://openalex.org/W3118865711","https://openalex.org/W3135351475","https://openalex.org/W3146944767","https://openalex.org/W3163602801","https://openalex.org/W3177500196","https://openalex.org/W4205773061","https://openalex.org/W4308574250","https://openalex.org/W4311582517","https://openalex.org/W4317435345","https://openalex.org/W4324130160","https://openalex.org/W4362522133","https://openalex.org/W4376279765","https://openalex.org/W4376598482","https://openalex.org/W4384662134","https://openalex.org/W4385214497","https://openalex.org/W4386917690","https://openalex.org/W4387378202","https://openalex.org/W4387420341","https://openalex.org/W4391432211","https://openalex.org/W4391616877","https://openalex.org/W4391716562","https://openalex.org/W4392561142","https://openalex.org/W4392561626","https://openalex.org/W4393190824","https://openalex.org/W4393981121","https://openalex.org/W4397049875","https://openalex.org/W4398133592","https://openalex.org/W4400140703","https://openalex.org/W4401519200","https://openalex.org/W4401835061","https://openalex.org/W4401980795","https://openalex.org/W4403130211","https://openalex.org/W4403216860","https://openalex.org/W4404637848","https://openalex.org/W4405728260","https://openalex.org/W4406143499","https://openalex.org/W4409877626"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2026-03-22T00:00:00"}
