{"id":"https://openalex.org/W3137401156","doi":"https://doi.org/10.1016/j.knosys.2021.106958","title":"A hybrid deep-learning approach for complex biochemical named entity recognition","display_name":"A hybrid deep-learning approach for complex biochemical named entity recognition","publication_year":2021,"publication_date":"2021-03-23","ids":{"openalex":"https://openalex.org/W3137401156","doi":"https://doi.org/10.1016/j.knosys.2021.106958","mag":"3137401156"},"language":"en","primary_location":{"id":"doi:10.1016/j.knosys.2021.106958","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.knosys.2021.106958","pdf_url":null,"source":{"id":"https://openalex.org/S10169007","display_name":"Knowledge-Based Systems","issn_l":"0950-7051","issn":["0950-7051","1872-7409"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Knowledge-Based Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100659367","display_name":"Jian Liu","orcid":"https://orcid.org/0000-0003-2636-5561"},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Liu","raw_affiliation_strings":["Anhui Province Key Laboratory of Industry Safety and Emergency Technology, Hefei 230601, Anhui, China","HeFei University of Technology, Hefei, 230009, China","Intelligent Interconnected Systems Laboratory of Anhui Province, Hefei University of Technology, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Anhui Province Key Laboratory of Industry Safety and Emergency Technology, Hefei 230601, Anhui, China","institution_ids":[]},{"raw_affiliation_string":"HeFei University of Technology, Hefei, 230009, China","institution_ids":["https://openalex.org/I16365422"]},{"raw_affiliation_string":"Intelligent Interconnected Systems Laboratory of Anhui Province, Hefei University of Technology, China","institution_ids":["https://openalex.org/I16365422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002631807","display_name":"Lei Gao","orcid":null},"institutions":[{"id":"https://openalex.org/I1292875679","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07","country_code":"AU","type":"government","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Lei Gao","raw_affiliation_strings":["CSIRO, Waite Campus, Urrbrae, SA 5064, Australia"],"raw_orcid":"https://orcid.org/0000-0003-4272-9417","affiliations":[{"raw_affiliation_string":"CSIRO, Waite Campus, Urrbrae, SA 5064, Australia","institution_ids":["https://openalex.org/I1292875679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063016879","display_name":"Sujie Guo","orcid":null},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]},{"id":"https://openalex.org/I4210088244","display_name":"Shanghai Micro Satellite Engineering Center","ror":"https://ror.org/003cp7918","country_code":"CN","type":"nonprofit","lineage":["https://openalex.org/I4210088244"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Sujie Guo","raw_affiliation_strings":["HeFei University of Technology, Hefei, 230009, China","Shanghai Engineering Center for Microsatellites, Shanghai 201203, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"HeFei University of Technology, Hefei, 230009, China","institution_ids":["https://openalex.org/I16365422"]},{"raw_affiliation_string":"Shanghai Engineering Center for Microsatellites, Shanghai 201203, China","institution_ids":["https://openalex.org/I4210088244"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007211058","display_name":"Rui Ding","orcid":"https://orcid.org/0000-0002-8174-1438"},"institutions":[{"id":"https://openalex.org/I16365422","display_name":"Hefei University of Technology","ror":"https://ror.org/02czkny70","country_code":"CN","type":"education","lineage":["https://openalex.org/I16365422"]},{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rui Ding","raw_affiliation_strings":["HeFei University of Technology, Hefei, 230009, China","Xi\u2019an Jiaotong University, Xi\u2019an, 710049, China","Xi'an Jiaotong University, Xi'an, 710049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"HeFei University of Technology, Hefei, 230009, China","institution_ids":["https://openalex.org/I16365422"]},{"raw_affiliation_string":"Xi\u2019an Jiaotong University, Xi\u2019an, 710049, China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"Xi'an Jiaotong University, Xi'an, 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100633921","display_name":"Xin Huang","orcid":"https://orcid.org/0000-0001-7103-7212"},"institutions":[{"id":"https://openalex.org/I15062923","display_name":"Tianjin Normal University","ror":"https://ror.org/05x2td559","country_code":"CN","type":"education","lineage":["https://openalex.org/I15062923"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Huang","raw_affiliation_strings":["College of Computer and Information Engineering, Tianjin Normal University, Tianjin 300387, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer and Information Engineering, Tianjin Normal University, Tianjin 300387, China","institution_ids":["https://openalex.org/I15062923"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100600271","display_name":"Long Ye","orcid":"https://orcid.org/0000-0002-3562-5612"},"institutions":[{"id":"https://openalex.org/I113940042","display_name":"Shanghai University","ror":"https://ror.org/006teas31","country_code":"CN","type":"education","lineage":["https://openalex.org/I113940042"]},{"id":"https://openalex.org/I153806059","display_name":"Shanghai Business School","ror":"https://ror.org/05kf5z787","country_code":"CN","type":"education","lineage":["https://openalex.org/I153806059"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Long Ye","raw_affiliation_strings":["Faculty of Business Information, Shanghai Business School, Shanghai 201400, China","School of Mechatronic Engineering and Automation, Shanghai University, Shanghai 200072, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Business Information, Shanghai Business School, Shanghai 201400, China","institution_ids":["https://openalex.org/I153806059"]},{"raw_affiliation_string":"School of Mechatronic Engineering and Automation, Shanghai University, Shanghai 200072, China","institution_ids":["https://openalex.org/I113940042"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087949783","display_name":"Qinghua Meng","orcid":"https://orcid.org/0009-0002-5294-2924"},"institutions":[{"id":"https://openalex.org/I153806059","display_name":"Shanghai Business School","ror":"https://ror.org/05kf5z787","country_code":"CN","type":"education","lineage":["https://openalex.org/I153806059"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qinghua Meng","raw_affiliation_strings":["Faculty of Business Information, Shanghai Business School, Shanghai 201400, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Business Information, Shanghai Business School, Shanghai 201400, China","institution_ids":["https://openalex.org/I153806059"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004653709","display_name":"Asef Nazari","orcid":"https://orcid.org/0000-0003-4955-9684"},"institutions":[{"id":"https://openalex.org/I149704539","display_name":"Deakin University","ror":"https://ror.org/02czsnj07","country_code":"AU","type":"education","lineage":["https://openalex.org/I149704539"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Asef Nazari","raw_affiliation_strings":["School of Information Technology, Deakin University, Geelong, Australia"],"raw_orcid":"https://orcid.org/0000-0003-4955-9684","affiliations":[{"raw_affiliation_string":"School of Information Technology, Deakin University, Geelong, Australia","institution_ids":["https://openalex.org/I149704539"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5046309576","display_name":"Dhananjay Thiruvady","orcid":"https://orcid.org/0000-0002-8011-933X"},"institutions":[{"id":"https://openalex.org/I149704539","display_name":"Deakin University","ror":"https://ror.org/02czsnj07","country_code":"AU","type":"education","lineage":["https://openalex.org/I149704539"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Dhananjay Thiruvady","raw_affiliation_strings":["School of Information Technology, Deakin University, Geelong, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Technology, Deakin University, Geelong, Australia","institution_ids":["https://openalex.org/I149704539"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5002631807"],"corresponding_institution_ids":["https://openalex.org/I1292875679"],"apc_list":{"value":3130,"currency":"USD","value_usd":3130},"apc_paid":null,"fwci":5.8764,"has_fulltext":false,"cited_by_count":59,"citation_normalized_percentile":{"value":0.96716119,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"221","issue":null,"first_page":"106958","last_page":"106958"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.880449652671814},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8192492723464966},{"id":"https://openalex.org/keywords/conditional-random-field","display_name":"Conditional random field","score":0.7905641198158264},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6947376728057861},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4735516607761383},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4589858949184418},{"id":"https://openalex.org/keywords/polysemy","display_name":"Polysemy","score":0.4523018002510071},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4501969814300537},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.4453229308128357},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.44176027178764343},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4308742880821228},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.42808234691619873},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.42229384183883667},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3801998794078827},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.34786635637283325}],"concepts":[{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.880449652671814},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8192492723464966},{"id":"https://openalex.org/C152565575","wikidata":"https://www.wikidata.org/wiki/Q1124538","display_name":"Conditional random field","level":2,"score":0.7905641198158264},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6947376728057861},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4735516607761383},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4589858949184418},{"id":"https://openalex.org/C2780276568","wikidata":"https://www.wikidata.org/wiki/Q191928","display_name":"Polysemy","level":2,"score":0.4523018002510071},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4501969814300537},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.4453229308128357},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.44176027178764343},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4308742880821228},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.42808234691619873},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.42229384183883667},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3801998794078827},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.34786635637283325},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1016/j.knosys.2021.106958","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.knosys.2021.106958","pdf_url":null,"source":{"id":"https://openalex.org/S10169007","display_name":"Knowledge-Based Systems","issn_l":"0950-7051","issn":["0950-7051","1872-7409"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Knowledge-Based Systems","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320328119","display_name":"National University's Basic Research Foundation of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":55,"referenced_works":["https://openalex.org/W1752600109","https://openalex.org/W1975568433","https://openalex.org/W2026926544","https://openalex.org/W2033130237","https://openalex.org/W2064675550","https://openalex.org/W2145870108","https://openalex.org/W2158899491","https://openalex.org/W2179519966","https://openalex.org/W2292537122","https://openalex.org/W2513587312","https://openalex.org/W2553910756","https://openalex.org/W2589369750","https://openalex.org/W2747592475","https://openalex.org/W2908261567","https://openalex.org/W2914120296","https://openalex.org/W2947996805","https://openalex.org/W2950133940","https://openalex.org/W2952230511","https://openalex.org/W2959686270","https://openalex.org/W2962902328","https://openalex.org/W2963560594","https://openalex.org/W2963587968","https://openalex.org/W2963625095","https://openalex.org/W2967649271","https://openalex.org/W2970049541","https://openalex.org/W2972721601","https://openalex.org/W2974511542","https://openalex.org/W2981467602","https://openalex.org/W2995416727","https://openalex.org/W2998135150","https://openalex.org/W3000445347","https://openalex.org/W3009352350","https://openalex.org/W3015747362","https://openalex.org/W3017774323","https://openalex.org/W3021191805","https://openalex.org/W3024259923","https://openalex.org/W3032936135","https://openalex.org/W3033826824","https://openalex.org/W3038952158","https://openalex.org/W3039975350","https://openalex.org/W3042505454","https://openalex.org/W3076947077","https://openalex.org/W3094493698","https://openalex.org/W4288604849","https://openalex.org/W6681203831","https://openalex.org/W6682691769","https://openalex.org/W6683738474","https://openalex.org/W6697154816","https://openalex.org/W6725543527","https://openalex.org/W6766246507","https://openalex.org/W6767737316","https://openalex.org/W6774380862","https://openalex.org/W6776380574","https://openalex.org/W6781412246","https://openalex.org/W6782293230"],"related_works":["https://openalex.org/W4250494529","https://openalex.org/W1964783010","https://openalex.org/W2399696375","https://openalex.org/W45206245","https://openalex.org/W2211396092","https://openalex.org/W2061834489","https://openalex.org/W3088215229","https://openalex.org/W2078793151","https://openalex.org/W3047727388","https://openalex.org/W4379379356"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":12},{"year":2024,"cited_by_count":16},{"year":2023,"cited_by_count":12},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":5}],"updated_date":"2026-05-26T13:28:51.108037","created_date":"2025-10-10T00:00:00"}
