{"id":"https://openalex.org/W7135421986","doi":"https://doi.org/10.1016/j.jbi.2026.105013","title":"A data-driven method for research trend analysis in a scientific discipline: Application to the journal of biomedical informatics","display_name":"A data-driven method for research trend analysis in a scientific discipline: Application to the journal of biomedical informatics","publication_year":2026,"publication_date":"2026-03-14","ids":{"openalex":"https://openalex.org/W7135421986","doi":"https://doi.org/10.1016/j.jbi.2026.105013","pmid":"https://pubmed.ncbi.nlm.nih.gov/41839246"},"language":"en","primary_location":{"id":"doi:10.1016/j.jbi.2026.105013","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.jbi.2026.105013","pdf_url":null,"source":{"id":"https://openalex.org/S11622463","display_name":"Journal of Biomedical Informatics","issn_l":"1532-0464","issn":["1532-0464","1532-0480"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1016/j.jbi.2026.105013","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061866993","display_name":"Yilu Fang","orcid":"https://orcid.org/0000-0002-2681-1931"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yilu Fang","raw_affiliation_strings":["Columbia University, New York, NY, USA"],"raw_orcid":"https://orcid.org/0000-0002-2681-1931","affiliations":[{"raw_affiliation_string":"Columbia University, New York, NY, USA","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005232556","display_name":"Gongbo Zhang","orcid":"https://orcid.org/0009-0001-0077-3615"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gongbo Zhang","raw_affiliation_strings":["Columbia University, New York, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Columbia University, New York, NY, USA","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5129219690","display_name":"Samir Sanchez Tejada","orcid":null},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Samir Sanchez Tejada","raw_affiliation_strings":["Columbia University, New York, NY, USA"],"raw_orcid":"https://orcid.org/0009-0003-4834-1330","affiliations":[{"raw_affiliation_string":"Columbia University, New York, NY, USA","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5129162913","display_name":"Fangyi Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fangyi Chen","raw_affiliation_strings":["Columbia University, New York, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Columbia University, New York, NY, USA","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016223285","display_name":"Edward H. Shortliffe","orcid":"https://orcid.org/0000-0001-5201-6176"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Edward Shortliffe","raw_affiliation_strings":["Columbia University, New York, NY, USA"],"raw_orcid":"https://orcid.org/0000-0001-5201-6176","affiliations":[{"raw_affiliation_string":"Columbia University, New York, NY, USA","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5129188429","display_name":"Vimla L. Patel","orcid":null},"institutions":[{"id":"https://openalex.org/I1341161822","display_name":"New York Academy of Sciences","ror":"https://ror.org/0316hvk63","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1341161822"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vimla L. Patel","raw_affiliation_strings":["Columbia University, New York, NY, USA; The New York Academy of Medicine, New York, NY, USA"],"raw_orcid":"https://orcid.org/0000-0003-1656-6642","affiliations":[{"raw_affiliation_string":"Columbia University, New York, NY, USA; The New York Academy of Medicine, New York, NY, USA","institution_ids":["https://openalex.org/I1341161822"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011142830","display_name":"Mor Peleg","orcid":"https://orcid.org/0000-0002-5612-768X"},"institutions":[{"id":"https://openalex.org/I91203450","display_name":"University of Haifa","ror":"https://ror.org/02f009v59","country_code":"IL","type":"education","lineage":["https://openalex.org/I91203450"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Mor Peleg","raw_affiliation_strings":["University of Haifa, Haifa, Israel"],"raw_orcid":"https://orcid.org/0000-0002-5612-768X","affiliations":[{"raw_affiliation_string":"University of Haifa, Haifa, Israel","institution_ids":["https://openalex.org/I91203450"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5123344858","display_name":"Chunhua Weng","orcid":null},"institutions":[{"id":"https://openalex.org/I2799503643","display_name":"Columbia University Irving Medical Center","ror":"https://ror.org/01esghr10","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2799503643"]},{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Chunhua Weng","raw_affiliation_strings":["Columbia University, New York, NY, USA. Electronic address: cw2384@cumc.columbia.edu"],"raw_orcid":"https://orcid.org/0000-0002-9624-0214","affiliations":[{"raw_affiliation_string":"Columbia University, New York, NY, USA. Electronic address: cw2384@cumc.columbia.edu","institution_ids":["https://openalex.org/I2799503643","https://openalex.org/I78577930"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5123344858"],"corresponding_institution_ids":["https://openalex.org/I2799503643","https://openalex.org/I78577930"],"apc_list":{"value":2980,"currency":"USD","value_usd":2980},"apc_paid":{"value":2980,"currency":"USD","value_usd":2980},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.44907055,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"178","issue":null,"first_page":"105013","last_page":"105013"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.11320000141859055,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.11320000141859055,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10102","display_name":"scientometrics and bibliometrics research","score":0.09160000085830688,"subfield":{"id":"https://openalex.org/subfields/1804","display_name":"Statistics, Probability and Uncertainty"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13607","display_name":"Academic Publishing and Open Access","score":0.04670000076293945,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/trend-analysis","display_name":"Trend analysis","score":0.6381000280380249},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.5788000226020813},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.5763000249862671},{"id":"https://openalex.org/keywords/bibliometrics","display_name":"Bibliometrics","score":0.4480000138282776},{"id":"https://openalex.org/keywords/translational-research-informatics","display_name":"Translational research informatics","score":0.42669999599456787},{"id":"https://openalex.org/keywords/translational-bioinformatics","display_name":"Translational bioinformatics","score":0.3384999930858612}],"concepts":[{"id":"https://openalex.org/C127142870","wikidata":"https://www.wikidata.org/wiki/Q7838279","display_name":"Trend analysis","level":2,"score":0.6381000280380249},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5831000208854675},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.5788000226020813},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.5763000249862671},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5577999949455261},{"id":"https://openalex.org/C178315738","wikidata":"https://www.wikidata.org/wiki/Q603441","display_name":"Bibliometrics","level":2,"score":0.4480000138282776},{"id":"https://openalex.org/C73851307","wikidata":"https://www.wikidata.org/wiki/Q7834546","display_name":"Translational research informatics","level":5,"score":0.42669999599456787},{"id":"https://openalex.org/C163293594","wikidata":"https://www.wikidata.org/wiki/Q7834541","display_name":"Translational bioinformatics","level":5,"score":0.3384999930858612},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.3091999888420105},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.2750000059604645},{"id":"https://openalex.org/C66782513","wikidata":"https://www.wikidata.org/wiki/Q864601","display_name":"Biomedicine","level":2,"score":0.2612000107765198},{"id":"https://openalex.org/C539667460","wikidata":"https://www.wikidata.org/wiki/Q2414942","display_name":"Management science","level":1,"score":0.25609999895095825},{"id":"https://openalex.org/C62085286","wikidata":"https://www.wikidata.org/wiki/Q6786605","display_name":"Materials informatics","level":5,"score":0.25040000677108765}],"mesh":[{"descriptor_ui":"D000098414","descriptor_name":"Pattern Analysis, Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008490","descriptor_name":"Medical Informatics","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012189","descriptor_name":"Retrospective Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1016/j.jbi.2026.105013","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.jbi.2026.105013","pdf_url":null,"source":{"id":"https://openalex.org/S11622463","display_name":"Journal of Biomedical Informatics","issn_l":"1532-0464","issn":["1532-0464","1532-0480"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Informatics","raw_type":"journal-article"},{"id":"pmid:41839246","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41839246","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical informatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:13032062","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13032062/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Inform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1016/j.jbi.2026.105013","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.jbi.2026.105013","pdf_url":null,"source":{"id":"https://openalex.org/S11622463","display_name":"Journal of Biomedical Informatics","issn_l":"1532-0464","issn":["1532-0464","1532-0480"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Informatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4713501941","display_name":null,"funder_award_id":"R01LM014344","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"}],"funders":[{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":51,"referenced_works":["https://openalex.org/W1799889357","https://openalex.org/W1901616594","https://openalex.org/W1975107573","https://openalex.org/W1981886524","https://openalex.org/W2017680781","https://openalex.org/W2030660601","https://openalex.org/W2066295411","https://openalex.org/W2150220236","https://openalex.org/W2274085011","https://openalex.org/W2315359243","https://openalex.org/W2550329658","https://openalex.org/W2615150331","https://openalex.org/W2747806927","https://openalex.org/W2755950973","https://openalex.org/W2799480983","https://openalex.org/W2911489562","https://openalex.org/W2944876309","https://openalex.org/W2963341956","https://openalex.org/W3046375318","https://openalex.org/W3194238940","https://openalex.org/W3198392198","https://openalex.org/W4200395585","https://openalex.org/W4206666681","https://openalex.org/W4207059825","https://openalex.org/W4210470804","https://openalex.org/W4224277908","https://openalex.org/W4238202694","https://openalex.org/W4281757148","https://openalex.org/W4321002059","https://openalex.org/W4377820139","https://openalex.org/W4380534756","https://openalex.org/W4384071683","https://openalex.org/W4384281875","https://openalex.org/W4386530347","https://openalex.org/W4392686512","https://openalex.org/W4392757369","https://openalex.org/W4394688596","https://openalex.org/W4396529913","https://openalex.org/W4396897827","https://openalex.org/W4398764592","https://openalex.org/W4399882939","https://openalex.org/W4401100256","https://openalex.org/W4402348202","https://openalex.org/W4406518253","https://openalex.org/W4407902269","https://openalex.org/W4409190866","https://openalex.org/W4409362385","https://openalex.org/W4409531882","https://openalex.org/W4411329051","https://openalex.org/W4412855861","https://openalex.org/W4412887840"],"related_works":[],"abstract_inverted_index":{"OBJECTIVE:":[0],"Accurately":[1],"characterizing":[2],"research":[3,20,31,62,199,311],"trends":[4,63,201],"is":[5],"critical":[6],"for":[7,117,257,278],"identifying":[8],"cutting-edge":[9],"scientific":[10,262],"breakthroughs":[11],"in":[12,64,202,272,313],"their":[13,105],"infancy":[14],"and":[15,37,44,47,89,95,103,158,184,212,231,268,280,286,294],"informing":[16],"strategic":[17],"priorities.":[18],"This":[19,246],"contributes":[21],"a":[22,56,249,261,301],"pipeline":[23,53],"that":[24,251],"utilizes":[25],"generative":[26,254],"AI":[27,255],"technologies":[28,256],"to":[29,142,170,236,264,269,304],"develop":[30],"topic":[32,48,101,147,175],"taxonomies":[33],"from":[34,133],"publication":[35,203,238],"keywords":[36,78,88,132,153,179],"analyze":[38],"keyword":[39,207],"evolution":[40,205,307],"within":[41,209],"topics,":[42,99,119,194],"methodological":[43,93,143],"domain":[45],"trends,":[46],"co-occurrences.":[49],"We":[50,72,84,112,165],"demonstrated":[51],"the":[52,65,74,87,124,193,197,218,227,232,237,240,292,297,306],"by":[54,239,276],"conducting":[55],"retrospective":[57,258],"analysis":[58,259],"of":[59,67,151,206,214,243,260,296,308],"biomedical":[60,309],"informatics":[61,310],"Journal":[66],"Biomedical":[68],"Informatics":[69],"(JBI).":[70],"METHODS:":[71],"identified":[73,98,166],"JBI":[75,279],"publications":[76,160,186],"with":[77,145,149,173,177,282],"available":[79],"on":[80,192],"PubMed,":[81],"spanning":[82],"2011-2025.":[83],"downloaded":[85],"all":[86,107],"categorized":[90],"them":[91],"into":[92],"innovations":[94],"health":[96,171],"domains,":[97,172],"assigned":[100,235],"names,":[102],"constructed":[104],"hierarchies,":[106],"using":[108],"large-language":[109],"models":[110],"(LLMs).":[111],"introduced":[113],"an":[114],"automated":[115],"method":[116,250],"evaluating":[118],"leveraging":[120],"MeSH":[121,229,233],"terminology":[122],"as":[123],"underlying":[125],"knowledge":[126],"base.":[127],"RESULTS:":[128],"Using":[129],"6,930":[130],"unique":[131],"2,427":[134],"publications,":[135,221],"we":[136,195],"derived":[137],"1,028":[138],"distinct":[139],"topics":[140,168,267],"related":[141,169],"innovations,":[144],"each":[146,174,210],"associated":[148,176],"medians":[150],"four":[152,185],"(Q1:":[154,161,180,187],"2,":[155,162],"Q3:":[156,163,182,189],"13)":[157],"six":[159],"19).":[164],"904":[167],"three":[178],"1,":[181,188],"11)":[183],"15).":[190],"Based":[191],"analyzed":[196],"prominent":[198],"areas,":[200],"volume,":[204],"distributions":[208],"topic,":[211],"patterns":[213],"co-occurring":[215],"topics.":[216],"Among":[217],"2,379":[219],"eligible":[220],"2,009":[222],"(84.4%)":[223],"exhibited":[224],"overlap":[225],"between":[226],"keyword-derived":[228],"terms":[230,234],"National":[241],"Library":[242],"Medicine.":[244],"CONCLUSION:":[245],"study":[247],"presents":[248],"leverages":[252],"modern":[253],"field":[263],"identify":[265],"emerging":[266],"detect":[270],"shifts":[271],"scholarly":[273],"focus.":[274],"Illustrated":[275],"data":[277],"correlated":[281],"historical":[283],"background":[284],"events":[285],"policy":[287],"changes,":[288],"our":[289],"findings":[290],"demonstrate":[291],"effectiveness":[293],"utility":[295],"methods":[298],"while":[299],"providing":[300],"powerful":[302],"lens":[303],"understand":[305],"priorities":[312],"JBI.":[314]},"counts_by_year":[],"updated_date":"2026-05-18T08:16:58.900851","created_date":"2026-03-15T00:00:00"}
