{"id":"https://openalex.org/W7131071534","doi":"https://doi.org/10.1016/j.jbi.2026.105000","title":"Predicting non-coding RNA function using Artificial Intelligence","display_name":"Predicting non-coding RNA function using Artificial Intelligence","publication_year":2026,"publication_date":"2026-02-23","ids":{"openalex":"https://openalex.org/W7131071534","doi":"https://doi.org/10.1016/j.jbi.2026.105000","pmid":"https://pubmed.ncbi.nlm.nih.gov/41740732"},"language":"en","primary_location":{"id":"doi:10.1016/j.jbi.2026.105000","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.jbi.2026.105000","pdf_url":null,"source":{"id":"https://openalex.org/S11622463","display_name":"Journal of Biomedical Informatics","issn_l":"1532-0464","issn":["1532-0464","1532-0480"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5115715890","display_name":"David C Correia","orcid":"https://orcid.org/0009-0001-8248-2669"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"David da Costa Correia","raw_affiliation_strings":["Departamento de Promo\u00e7\u00e3o da Sa\u00fade e Preven\u00e7\u00e3o de Doen\u00e7as n\u00e3o Transmissiveis, Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Avenida Padre Cruz, Lisboa, 1649-016, Portugal; BioISI - Biosystems and Integrative Sciences Institute, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal; Departamento de Inform\u00e1tica, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal; LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal"],"raw_orcid":"https://orcid.org/0009-0001-8248-2669","affiliations":[{"raw_affiliation_string":"Departamento de Promo\u00e7\u00e3o da Sa\u00fade e Preven\u00e7\u00e3o de Doen\u00e7as n\u00e3o Transmissiveis, Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Avenida Padre Cruz, Lisboa, 1649-016, Portugal; BioISI - Biosystems and Integrative Sciences Institute, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal; Departamento de Inform\u00e1tica, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal; LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014333753","display_name":"Francisco M. Couto","orcid":"https://orcid.org/0000-0003-0627-1496"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Francisco M. Couto","raw_affiliation_strings":["Departamento de Inform\u00e1tica, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal; LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal"],"raw_orcid":"https://orcid.org/0000-0003-0627-1496","affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal; LASIGE, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047928362","display_name":"Hugo Martiniano","orcid":"https://orcid.org/0000-0003-2490-8913"},"institutions":[{"id":"https://openalex.org/I4210110056","display_name":"Administra\u00e7\u00e3o Regional de Sa\u00fade de Lisboa e Vale do Tejo","ror":"https://ror.org/0208sdr22","country_code":"PT","type":"government","lineage":["https://openalex.org/I4210110056"]},{"id":"https://openalex.org/I4210134464","display_name":"Instituto Nacional de Sa\u00fade","ror":"https://ror.org/03hq46410","country_code":"MZ","type":"government","lineage":["https://openalex.org/I4210134464"]}],"countries":["MZ","PT"],"is_corresponding":true,"raw_author_name":"Hugo Martiniano","raw_affiliation_strings":["Departamento de Promo\u00e7\u00e3o da Sa\u00fade e Preven\u00e7\u00e3o de Doen\u00e7as n\u00e3o Transmissiveis, Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Avenida Padre Cruz, Lisboa, 1649-016, Portugal; BioISI - Biosystems and Integrative Sciences Institute, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal. Electronic address: hugo.martiniano@insa.min-saude.pt"],"raw_orcid":"https://orcid.org/0000-0003-2490-8913","affiliations":[{"raw_affiliation_string":"Departamento de Promo\u00e7\u00e3o da Sa\u00fade e Preven\u00e7\u00e3o de Doen\u00e7as n\u00e3o Transmissiveis, Instituto Nacional de Sa\u00fade Doutor Ricardo Jorge, Avenida Padre Cruz, Lisboa, 1649-016, Portugal; BioISI - Biosystems and Integrative Sciences Institute, Faculdade de Ci\u00eancias da Universidade de Lisboa, Campo Grande, Lisboa, 1749-016, Portugal. Electronic address: hugo.martiniano@insa.min-saude.pt","institution_ids":["https://openalex.org/I4210134464","https://openalex.org/I4210110056"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5047928362"],"corresponding_institution_ids":["https://openalex.org/I4210110056","https://openalex.org/I4210134464"],"apc_list":{"value":2980,"currency":"USD","value_usd":2980},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.35125013,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"176","issue":null,"first_page":"105000","last_page":"105000"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.26100000739097595,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.26100000739097595,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.25119999051094055,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.09229999780654907,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7110000252723694},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.5625},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.5038999915122986},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4726000130176544},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.40630000829696655},{"id":"https://openalex.org/keywords/semantic-annotation","display_name":"Semantic annotation","score":0.35339999198913574}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7494000196456909},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7110000252723694},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6866999864578247},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.5625},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.5038999915122986},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4726000130176544},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.45339998602867126},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.40630000829696655},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.37040001153945923},{"id":"https://openalex.org/C2985727698","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Semantic annotation","level":3,"score":0.35339999198913574},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3409000039100647},{"id":"https://openalex.org/C5655090","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database","level":2,"score":0.304500013589859},{"id":"https://openalex.org/C51632099","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Training set","level":2,"score":0.29510000348091125},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2865999937057495},{"id":"https://openalex.org/C2779382394","wikidata":"https://www.wikidata.org/wiki/Q1464197","display_name":"Inductive logic programming","level":2,"score":0.2515000104904175}],"mesh":[{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D022661","descriptor_name":"RNA, Untranslated","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D022661","descriptor_name":"RNA, Untranslated","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.jbi.2026.105000","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.jbi.2026.105000","pdf_url":null,"source":{"id":"https://openalex.org/S11622463","display_name":"Journal of Biomedical Informatics","issn_l":"1532-0464","issn":["1532-0464","1532-0480"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Informatics","raw_type":"journal-article"},{"id":"pmid:41740732","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41740732","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334779","display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","ror":"https://ror.org/00snfqn58"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W2594818524","https://openalex.org/W2747680751","https://openalex.org/W2903305690","https://openalex.org/W2998702515","https://openalex.org/W3010127844","https://openalex.org/W3095979265","https://openalex.org/W3129725165","https://openalex.org/W3195374427","https://openalex.org/W4295736374","https://openalex.org/W4297891375","https://openalex.org/W4306353191","https://openalex.org/W4315436171","https://openalex.org/W4362601037","https://openalex.org/W4384931241","https://openalex.org/W4386305887","https://openalex.org/W4387516871","https://openalex.org/W4388616071","https://openalex.org/W4393129959"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-05-05T08:41:31.759640","created_date":"2026-02-24T00:00:00"}
