{"id":"https://openalex.org/W2965712375","doi":"https://doi.org/10.1016/j.jbi.2019.103254","title":"Genome-wide analysis of multi-view data of miRNA-seq to identify miRNA biomarkers for stomach cancer","display_name":"Genome-wide analysis of multi-view data of miRNA-seq to identify miRNA biomarkers for stomach cancer","publication_year":2019,"publication_date":"2019-07-25","ids":{"openalex":"https://openalex.org/W2965712375","doi":"https://doi.org/10.1016/j.jbi.2019.103254","mag":"2965712375","pmid":"https://pubmed.ncbi.nlm.nih.gov/31352060"},"language":"en","primary_location":{"id":"doi:10.1016/j.jbi.2019.103254","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.jbi.2019.103254","pdf_url":null,"source":{"id":"https://openalex.org/S11622463","display_name":"Journal of Biomedical Informatics","issn_l":"1532-0464","issn":["1532-0464","1532-0480"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083381157","display_name":"Namrata Pant","orcid":null},"institutions":[{"id":"https://openalex.org/I154549908","display_name":"Indian Institute of Technology Jodhpur","ror":"https://ror.org/03yacj906","country_code":"IN","type":"education","lineage":["https://openalex.org/I154549908"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Namrata Pant","raw_affiliation_strings":["Department of Bioscience and Bioengineering, Indian Institute of Technology, Jodhpur, India"],"affiliations":[{"raw_affiliation_string":"Department of Bioscience and Bioengineering, Indian Institute of Technology, Jodhpur, India","institution_ids":["https://openalex.org/I154549908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091535094","display_name":"Somnath Rakshit","orcid":"https://orcid.org/0000-0002-2017-5997"},"institutions":[{"id":"https://openalex.org/I4210094264","display_name":"National Institute of Technical Teachers\u2019 Training and Research","ror":"https://ror.org/00k8f0f41","country_code":"IN","type":"education","lineage":["https://openalex.org/I4210094264"]},{"id":"https://openalex.org/I4654613","display_name":"University of Warsaw","ror":"https://ror.org/039bjqg32","country_code":"PL","type":"education","lineage":["https://openalex.org/I4654613"]}],"countries":["IN","PL"],"is_corresponding":false,"raw_author_name":"Somnath Rakshit","raw_affiliation_strings":["Department of Computer Science and Engineering, National Institute of Technical Teachers' Training and Research, Kolkata, India; Laboratory of Functional and Structural Genomics, Center of New Technologies, University of Warsaw, Warsaw, Poland","Department of Computer Science and Engineering, National Institute of Technical Teachers' Training and Research, Kolkata, India","Laboratory of Functional and Structural Genomics, Center of New Technologies, University of Warsaw, Warsaw, Poland"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, National Institute of Technical Teachers' Training and Research, Kolkata, India; Laboratory of Functional and Structural Genomics, Center of New Technologies, University of Warsaw, Warsaw, Poland","institution_ids":["https://openalex.org/I4210094264"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, National Institute of Technical Teachers' Training and Research, Kolkata, India","institution_ids":["https://openalex.org/I4210094264"]},{"raw_affiliation_string":"Laboratory of Functional and Structural Genomics, Center of New Technologies, University of Warsaw, Warsaw, Poland","institution_ids":["https://openalex.org/I4654613"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078102464","display_name":"Sushmita Paul","orcid":"https://orcid.org/0000-0003-0540-9369"},"institutions":[{"id":"https://openalex.org/I154549908","display_name":"Indian Institute of Technology Jodhpur","ror":"https://ror.org/03yacj906","country_code":"IN","type":"education","lineage":["https://openalex.org/I154549908"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Sushmita Paul","raw_affiliation_strings":["Department of Bioscience and Bioengineering, Indian Institute of Technology, Jodhpur, India"],"affiliations":[{"raw_affiliation_string":"Department of Bioscience and Bioengineering, Indian Institute of Technology, Jodhpur, India","institution_ids":["https://openalex.org/I154549908"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003577135","display_name":"Indrajit Saha","orcid":"https://orcid.org/0000-0001-9513-9707"},"institutions":[{"id":"https://openalex.org/I4210094264","display_name":"National Institute of Technical Teachers\u2019 Training and Research","ror":"https://ror.org/00k8f0f41","country_code":"IN","type":"education","lineage":["https://openalex.org/I4210094264"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Indrajit Saha","raw_affiliation_strings":["Department of Computer Science and Engineering, National Institute of Technical Teachers' Training and Research, Kolkata, India. Electronic address: indrajit@nitttrkol.ac.in","Department of Computer Science and Engineering, National Institute of Technical Teachers' Training and Research, Kolkata, India"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, National Institute of Technical Teachers' Training and Research, Kolkata, India. Electronic address: indrajit@nitttrkol.ac.in","institution_ids":["https://openalex.org/I4210094264"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, National Institute of Technical Teachers' Training and Research, Kolkata, India","institution_ids":["https://openalex.org/I4210094264"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5003577135"],"corresponding_institution_ids":["https://openalex.org/I4210094264"],"apc_list":{"value":2980,"currency":"USD","value_usd":2980},"apc_paid":null,"fwci":0.5345,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.59491279,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"97","issue":null,"first_page":"103254","last_page":"103254"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.7406688928604126},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5805673599243164},{"id":"https://openalex.org/keywords/stomach-cancer","display_name":"Stomach cancer","score":0.5607673525810242},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.5011296272277832},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4371478259563446},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3806339502334595},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.22331157326698303},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21797412633895874}],"concepts":[{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.7406688928604126},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5805673599243164},{"id":"https://openalex.org/C2779454504","wikidata":"https://www.wikidata.org/wiki/Q189588","display_name":"Stomach cancer","level":3,"score":0.5607673525810242},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.5011296272277832},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4371478259563446},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3806339502334595},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.22331157326698303},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21797412633895874}],"mesh":[{"descriptor_ui":"D000081246","descriptor_name":"RNA-Seq","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D000081246","descriptor_name":"RNA-Seq","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D000081246","descriptor_name":"RNA-Seq","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013274","descriptor_name":"Stomach Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D013274","descriptor_name":"Stomach Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D013274","descriptor_name":"Stomach Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D013274","descriptor_name":"Stomach Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013274","descriptor_name":"Stomach Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013274","descriptor_name":"Stomach Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055088","descriptor_name":"Early Detection of Cancer","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D055088","descriptor_name":"Early Detection of Cancer","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D055088","descriptor_name":"Early Detection of Cancer","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.jbi.2019.103254","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.jbi.2019.103254","pdf_url":null,"source":{"id":"https://openalex.org/S11622463","display_name":"Journal of Biomedical Informatics","issn_l":"1532-0464","issn":["1532-0464","1532-0480"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Informatics","raw_type":"journal-article"},{"id":"pmid:31352060","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31352060","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.8399999737739563,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W1580817707","https://openalex.org/W1609044025","https://openalex.org/W1978086123","https://openalex.org/W1998630067","https://openalex.org/W2004419844","https://openalex.org/W2070050178","https://openalex.org/W2083155754","https://openalex.org/W2091762390","https://openalex.org/W2122582841","https://openalex.org/W2149454242","https://openalex.org/W2158485828","https://openalex.org/W2159675211","https://openalex.org/W2162833766","https://openalex.org/W2296161871","https://openalex.org/W2315204759","https://openalex.org/W2344681634","https://openalex.org/W2612584077","https://openalex.org/W2616754551","https://openalex.org/W2687127292","https://openalex.org/W2725273399","https://openalex.org/W2765950793","https://openalex.org/W2789254732","https://openalex.org/W2795705423","https://openalex.org/W2799307902","https://openalex.org/W2808272148","https://openalex.org/W2809363952","https://openalex.org/W2894871804","https://openalex.org/W2997674406","https://openalex.org/W6635031778","https://openalex.org/W6650070148","https://openalex.org/W6682496738","https://openalex.org/W6683874248","https://openalex.org/W6697398846","https://openalex.org/W6740023634","https://openalex.org/W6754777889","https://openalex.org/W7075272565"],"related_works":["https://openalex.org/W2737319532","https://openalex.org/W3151405604","https://openalex.org/W2565797512","https://openalex.org/W2050308539","https://openalex.org/W2793648706","https://openalex.org/W3043187607","https://openalex.org/W2360949490","https://openalex.org/W2382301224","https://openalex.org/W2057742104","https://openalex.org/W4283692078"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":1}],"updated_date":"2026-03-10T14:07:55.174380","created_date":"2025-10-10T00:00:00"}
