{"id":"https://openalex.org/W7148248816","doi":"https://doi.org/10.1016/j.ijmedinf.2026.106424","title":"Precision Grounding: augmenting large language models with evidence-based databases for trustworthy genetic variant summarization","display_name":"Precision Grounding: augmenting large language models with evidence-based databases for trustworthy genetic variant summarization","publication_year":2026,"publication_date":"2026-04-03","ids":{"openalex":"https://openalex.org/W7148248816","doi":"https://doi.org/10.1016/j.ijmedinf.2026.106424"},"language":"en","primary_location":{"id":"doi:10.1016/j.ijmedinf.2026.106424","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.ijmedinf.2026.106424","pdf_url":null,"source":{"id":"https://openalex.org/S53142634","display_name":"International Journal of Medical Informatics","issn_l":"1386-5056","issn":["1386-5056","1872-8243"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Medical Informatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081158169","display_name":"Xinsong Du","orcid":"https://orcid.org/0000-0003-3713-3264"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Xinsong Du","raw_affiliation_strings":["Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, United States; Department of Biomedical Informatics, Harvard Medical School, Boston, United States. Electronic address: xidu1@bwh.harvard.edu"],"raw_orcid":"https://orcid.org/0000-0003-3713-3264","affiliations":[{"raw_affiliation_string":"Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, United States; Department of Biomedical Informatics, Harvard Medical School, Boston, United States. Electronic address: xidu1@bwh.harvard.edu","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5132797797","display_name":"Anna Nagy","orcid":null},"institutions":[{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anna Nagy","raw_affiliation_strings":["Laboratory for Molecular Medicine, Mass General Brigham, Boston, United States"],"raw_orcid":"https://orcid.org/0000-0001-8050-0168","affiliations":[{"raw_affiliation_string":"Laboratory for Molecular Medicine, Mass General Brigham, Boston, United States","institution_ids":["https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5132798098","display_name":"Michael F. Oates","orcid":null},"institutions":[{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael F. Oates","raw_affiliation_strings":["Laboratory for Molecular Medicine, Mass General Brigham, Boston, United States; Digital Research Operations, Mass General Brigham, Boston, United States"],"raw_orcid":"https://orcid.org/0000-0003-0131-2578","affiliations":[{"raw_affiliation_string":"Laboratory for Molecular Medicine, Mass General Brigham, Boston, United States; Digital Research Operations, Mass General Brigham, Boston, United States","institution_ids":["https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5132793366","display_name":"Yifei Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I6902469","display_name":"Brandeis University","ror":"https://ror.org/05abbep66","country_code":"US","type":"education","lineage":["https://openalex.org/I6902469"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yifei Wang","raw_affiliation_strings":["Michtom School of Computer Science, Brandeis University, Waltham, United States"],"raw_orcid":"https://orcid.org/0000-0002-8295-5534","affiliations":[{"raw_affiliation_string":"Michtom School of Computer Science, Brandeis University, Waltham, United States","institution_ids":["https://openalex.org/I6902469"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5132812145","display_name":"Xinyi Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xinyi Wang","raw_affiliation_strings":["Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, United States; Department of Biomedical Informatics, Harvard Medical School, Boston, United States"],"raw_orcid":"https://orcid.org/0009-0007-5490-6616","affiliations":[{"raw_affiliation_string":"Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, United States; Department of Biomedical Informatics, Harvard Medical School, Boston, United States","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066318724","display_name":"Joseph M. Plasek","orcid":"https://orcid.org/0000-0002-9686-3876"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph M. Plasek","raw_affiliation_strings":["Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, United States; Department of Biomedical Informatics, Harvard Medical School, Boston, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, United States; Department of Biomedical Informatics, Harvard Medical School, Boston, United States","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015481401","display_name":"Samuel Aronson","orcid":"https://orcid.org/0000-0002-2490-6822"},"institutions":[{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Samuel J. Aronson","raw_affiliation_strings":["Laboratory for Molecular Medicine, Mass General Brigham, Boston, United States; Digital Research Operations, Mass General Brigham, Boston, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Molecular Medicine, Mass General Brigham, Boston, United States; Digital Research Operations, Mass General Brigham, Boston, United States","institution_ids":["https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5132790874","display_name":"Matthew S. Lebo","orcid":null},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew S. Lebo","raw_affiliation_strings":["Laboratory for Molecular Medicine, Mass General Brigham, Boston, United States; Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, United States; Molecular and Population Genetics, Broad Institute of Harvard and MIT, Boston, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Molecular Medicine, Mass General Brigham, Boston, United States; Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, United States; Molecular and Population Genetics, Broad Institute of Harvard and MIT, Boston, United States","institution_ids":["https://openalex.org/I1283280774"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5132807822","display_name":"Li Zhou","orcid":null},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Li Zhou","raw_affiliation_strings":["Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, United States; Department of Biomedical Informatics, Harvard Medical School, Boston, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, United States; Department of Biomedical Informatics, Harvard Medical School, Boston, United States","institution_ids":["https://openalex.org/I1283280774"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5081158169"],"corresponding_institution_ids":["https://openalex.org/I1283280774"],"apc_list":{"value":3210,"currency":"USD","value_usd":3210},"apc_paid":null,"fwci":10.1928,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.97356718,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":97},"biblio":{"volume":"214","issue":null,"first_page":"106424","last_page":"106424"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.5026999711990356,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.5026999711990356,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.27480000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.08959999680519104,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/automatic-summarization","display_name":"Automatic summarization","score":0.7506999969482422},{"id":"https://openalex.org/keywords/trustworthiness","display_name":"Trustworthiness","score":0.6158999800682068},{"id":"https://openalex.org/keywords/genetic-variants","display_name":"Genetic variants","score":0.3596999943256378},{"id":"https://openalex.org/keywords/genetic-algorithm","display_name":"Genetic algorithm","score":0.3239000141620636},{"id":"https://openalex.org/keywords/data-modeling","display_name":"Data modeling","score":0.3075000047683716}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7918000221252441},{"id":"https://openalex.org/C170858558","wikidata":"https://www.wikidata.org/wiki/Q1394144","display_name":"Automatic summarization","level":2,"score":0.7506999969482422},{"id":"https://openalex.org/C153701036","wikidata":"https://www.wikidata.org/wiki/Q659974","display_name":"Trustworthiness","level":2,"score":0.6158999800682068},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.49790000915527344},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.47290000319480896},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4602999985218048},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3781999945640564},{"id":"https://openalex.org/C2993967602","wikidata":"https://www.wikidata.org/wiki/Q5532932","display_name":"Genetic variants","level":4,"score":0.3596999943256378},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3384000062942505},{"id":"https://openalex.org/C8880873","wikidata":"https://www.wikidata.org/wiki/Q187787","display_name":"Genetic algorithm","level":2,"score":0.3239000141620636},{"id":"https://openalex.org/C67186912","wikidata":"https://www.wikidata.org/wiki/Q367664","display_name":"Data modeling","level":2,"score":0.3075000047683716},{"id":"https://openalex.org/C155092808","wikidata":"https://www.wikidata.org/wiki/Q182557","display_name":"Computational linguistics","level":2,"score":0.30559998750686646},{"id":"https://openalex.org/C137293760","wikidata":"https://www.wikidata.org/wiki/Q3621696","display_name":"Language model","level":2,"score":0.2957000136375427},{"id":"https://openalex.org/C2778334786","wikidata":"https://www.wikidata.org/wiki/Q1586270","display_name":"Variation (astronomy)","level":2,"score":0.25929999351501465}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1016/j.ijmedinf.2026.106424","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.ijmedinf.2026.106424","pdf_url":null,"source":{"id":"https://openalex.org/S53142634","display_name":"International Journal of Medical Informatics","issn_l":"1386-5056","issn":["1386-5056","1872-8243"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Medical Informatics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5540497499","display_name":null,"funder_award_id":"U24HG006834-10S1","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"}],"funders":[{"id":"https://openalex.org/F4320337337","display_name":"National Institute on Aging","ror":"https://ror.org/049v75w11"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W2051978340","https://openalex.org/W2328234520","https://openalex.org/W2791700336","https://openalex.org/W2953490575","https://openalex.org/W2967605415","https://openalex.org/W3147241712","https://openalex.org/W3207534753","https://openalex.org/W4319294349","https://openalex.org/W4379378591","https://openalex.org/W4385572448","https://openalex.org/W4391487347","https://openalex.org/W4392193048","https://openalex.org/W4399803256","https://openalex.org/W4402486948","https://openalex.org/W4402692877","https://openalex.org/W4402909345","https://openalex.org/W4403353492","https://openalex.org/W4403420208","https://openalex.org/W4406079296","https://openalex.org/W4407108350","https://openalex.org/W4408153968","https://openalex.org/W4409385489","https://openalex.org/W4410030662","https://openalex.org/W4412202274","https://openalex.org/W4415233873","https://openalex.org/W7123937002"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-07-04T07:58:01.006859","created_date":"2026-04-03T00:00:00"}
