{"id":"https://openalex.org/W3179290680","doi":"https://doi.org/10.1016/j.gpb.2021.03.007","title":"Mako: A Graph-Based Pattern Growth Approach to Detect Complex Structural Variants","display_name":"Mako: A Graph-Based Pattern Growth Approach to Detect Complex Structural Variants","publication_year":2021,"publication_date":"2021-07-02","ids":{"openalex":"https://openalex.org/W3179290680","doi":"https://doi.org/10.1016/j.gpb.2021.03.007","mag":"3179290680","pmid":"https://pubmed.ncbi.nlm.nih.gov/34224879"},"language":"en","primary_location":{"id":"doi:10.1016/j.gpb.2021.03.007","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.gpb.2021.03.007","pdf_url":"https://www.sciencedirect.com/science/article/pii/S1672022921001431/pdf","source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.sciencedirect.com/science/article/pii/S1672022921001431/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079317086","display_name":"Jiadong Lin","orcid":"https://orcid.org/0000-0002-8116-5901"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]},{"id":"https://openalex.org/I4210121771","display_name":"First Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/02tbvhh96","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121771"]},{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN","NL"],"is_corresponding":false,"raw_author_name":"Jiadong Lin","raw_affiliation_strings":["Genome Institute, the First Affiliated Hospital of Xi\u2019an Jiaotong University , Xi\u2019an, 710061 , China","Leiden Institute of Advanced Computer Science, Faculty of Science, Leiden University , Leiden, 2311EZ , Netherland","MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China"],"raw_orcid":"https://orcid.org/0000-0002-8116-5901","affiliations":[{"raw_affiliation_string":"Genome Institute, the First Affiliated Hospital of Xi\u2019an Jiaotong University , Xi\u2019an, 710061 , China","institution_ids":["https://openalex.org/I4210121771"]},{"raw_affiliation_string":"Leiden Institute of Advanced Computer Science, Faculty of Science, Leiden University , Leiden, 2311EZ , Netherland","institution_ids":["https://openalex.org/I121797337"]},{"raw_affiliation_string":"MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070230762","display_name":"Xiaofei Yang","orcid":"https://orcid.org/0000-0002-5118-7755"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaofei Yang","raw_affiliation_strings":["MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","School of Computer Science and Technology, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China"],"raw_orcid":"https://orcid.org/0000-0002-5118-7755","affiliations":[{"raw_affiliation_string":"MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"School of Computer Science and Technology, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054569164","display_name":"Walter A. Kosters","orcid":"https://orcid.org/0000-0001-8860-0390"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Walter Kosters","raw_affiliation_strings":["Leiden Institute of Advanced Computer Science, Faculty of Science, Leiden University , Leiden, 2311EZ , Netherland"],"raw_orcid":"https://orcid.org/0000-0001-8860-0390","affiliations":[{"raw_affiliation_string":"Leiden Institute of Advanced Computer Science, Faculty of Science, Leiden University , Leiden, 2311EZ , Netherland","institution_ids":["https://openalex.org/I121797337"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019016114","display_name":"Tun Xu","orcid":"https://orcid.org/0000-0003-3194-1834"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tun Xu","raw_affiliation_strings":["School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China"],"raw_orcid":"https://orcid.org/0000-0003-3194-1834","affiliations":[{"raw_affiliation_string":"School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101728288","display_name":"Yanyan Jia","orcid":"https://orcid.org/0000-0002-4966-0574"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanyan Jia","raw_affiliation_strings":["School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China"],"raw_orcid":"https://orcid.org/0000-0002-4966-0574","affiliations":[{"raw_affiliation_string":"School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101460007","display_name":"Songbo Wang","orcid":"https://orcid.org/0000-0003-4482-8128"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Songbo Wang","raw_affiliation_strings":["School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China"],"raw_orcid":"https://orcid.org/0000-0003-4482-8128","affiliations":[{"raw_affiliation_string":"School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000377378","display_name":"Qihui Zhu","orcid":"https://orcid.org/0000-0003-2401-8443"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]},{"id":"https://openalex.org/I4405260184","display_name":"The Jackson Laboratory for Genomic Medicine","ror":"https://ror.org/03cew3973","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qihui Zhu","raw_affiliation_strings":["The Jackson Laboratory for Genomic Medicine , Farmington, CT, 06032 , USA"],"raw_orcid":"https://orcid.org/0000-0003-2401-8443","affiliations":[{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine , Farmington, CT, 06032 , USA","institution_ids":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003141918","display_name":"Mallory Ryan","orcid":"https://orcid.org/0000-0001-5428-0018"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]},{"id":"https://openalex.org/I4405260184","display_name":"The Jackson Laboratory for Genomic Medicine","ror":"https://ror.org/03cew3973","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mallory Ryan","raw_affiliation_strings":["The Jackson Laboratory for Genomic Medicine , Farmington, CT, 06032 , USA"],"raw_orcid":"https://orcid.org/0000-0001-5428-0018","affiliations":[{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine , Farmington, CT, 06032 , USA","institution_ids":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026487938","display_name":"Li Guo","orcid":"https://orcid.org/0000-0001-6100-3481"},"institutions":[{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Li Guo","raw_affiliation_strings":["MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China"],"raw_orcid":"https://orcid.org/0000-0001-6100-3481","affiliations":[{"raw_affiliation_string":"MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042321575","display_name":"Mark Gerstein","orcid":"https://orcid.org/0000-0002-9746-3719"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark B. Gerstein","raw_affiliation_strings":["Program in Computational Biology and Bioinformatics, Yale University , New Haven, CT, 06520 , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Program in Computational Biology and Bioinformatics, Yale University , New Haven, CT, 06520 , USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044232354","display_name":"Ashley D. Sanders","orcid":"https://orcid.org/0000-0003-3945-0677"},"institutions":[{"id":"https://openalex.org/I4210138560","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/03mstc592","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ashley D. Sanders","raw_affiliation_strings":["European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany","institution_ids":["https://openalex.org/I4210138560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038698652","display_name":"Michael C. Zody","orcid":"https://orcid.org/0000-0001-6594-7199"},"institutions":[{"id":"https://openalex.org/I4210151462","display_name":"New York Genome Center","ror":"https://ror.org/05wf2ga96","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210151462"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Micheal C. Zody","raw_affiliation_strings":["New York Genome Center , New York, NY, 10013 , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"New York Genome Center , New York, NY, 10013 , USA","institution_ids":["https://openalex.org/I4210151462"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060291693","display_name":"Michael E. Talkowski","orcid":"https://orcid.org/0000-0003-2889-0992"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210087915","display_name":"Massachusetts General Hospital","ror":"https://ror.org/002pd6e78","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087915","https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael E. Talkowski","raw_affiliation_strings":["Center for Genomic Medicine, Massachusetts General Hospital, Department of Neurology, Harvard Medical School , Boston, MA, 02114 , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Genomic Medicine, Massachusetts General Hospital, Department of Neurology, Harvard Medical School , Boston, MA, 02114 , USA","institution_ids":["https://openalex.org/I136199984","https://openalex.org/I4210087915"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036795235","display_name":"Ryan E. Mills","orcid":"https://orcid.org/0000-0003-3425-6998"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ryan E. Mills","raw_affiliation_strings":["Department of Computational Medicine & Bioinformatics, University of Michigan , Ann Arbor, MI, 48109 , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computational Medicine & Bioinformatics, University of Michigan , Ann Arbor, MI, 48109 , USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071136927","display_name":"Jan O. Korbel","orcid":"https://orcid.org/0000-0002-2798-3794"},"institutions":[{"id":"https://openalex.org/I4210138560","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/03mstc592","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jan O. Korbel","raw_affiliation_strings":["European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany","institution_ids":["https://openalex.org/I4210138560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067570776","display_name":"Tobias Marschall","orcid":"https://orcid.org/0000-0002-9376-1030"},"institutions":[{"id":"https://openalex.org/I44260953","display_name":"Heinrich Heine University D\u00fcsseldorf","ror":"https://ror.org/024z2rq82","country_code":"DE","type":"education","lineage":["https://openalex.org/I44260953"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tobias Marschall","raw_affiliation_strings":["Heinrich Heine University, Medical Faculty, Institute for Medical Biometry and Bioinformatics , D-40225 D\u00fcsseldorf , Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Heinrich Heine University, Medical Faculty, Institute for Medical Biometry and Bioinformatics , D-40225 D\u00fcsseldorf , Germany","institution_ids":["https://openalex.org/I44260953"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056879660","display_name":"Peter Ebert","orcid":"https://orcid.org/0000-0001-7441-532X"},"institutions":[{"id":"https://openalex.org/I44260953","display_name":"Heinrich Heine University D\u00fcsseldorf","ror":"https://ror.org/024z2rq82","country_code":"DE","type":"education","lineage":["https://openalex.org/I44260953"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Peter Ebert","raw_affiliation_strings":["Heinrich Heine University, Medical Faculty, Institute for Medical Biometry and Bioinformatics , D-40225 D\u00fcsseldorf , Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Heinrich Heine University, Medical Faculty, Institute for Medical Biometry and Bioinformatics , D-40225 D\u00fcsseldorf , Germany","institution_ids":["https://openalex.org/I44260953"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054713542","display_name":"Peter A. Audano","orcid":"https://orcid.org/0000-0002-5187-0415"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter A. Audano","raw_affiliation_strings":["Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98195-5065 , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98195-5065 , USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049418625","display_name":"Bernardo Rodr\u00edguez\u2013Mart\u00edn","orcid":"https://orcid.org/0000-0003-4693-3140"},"institutions":[{"id":"https://openalex.org/I4210138560","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/03mstc592","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Bernardo Rodriguez-Martin","raw_affiliation_strings":["European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany","institution_ids":["https://openalex.org/I4210138560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087265421","display_name":"David Porubsk\u1ef3","orcid":"https://orcid.org/0000-0001-8414-8966"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I44260953","display_name":"Heinrich Heine University D\u00fcsseldorf","ror":"https://ror.org/024z2rq82","country_code":"DE","type":"education","lineage":["https://openalex.org/I44260953"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["DE","US"],"is_corresponding":false,"raw_author_name":"David Porubsky","raw_affiliation_strings":["Heinrich Heine University, Medical Faculty, Institute for Medical Biometry and Bioinformatics , D-40225 D\u00fcsseldorf , Germany","Department of Genome Sciences, University of Washington","School of Medicine, Seattle, WA 98195, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Heinrich Heine University, Medical Faculty, Institute for Medical Biometry and Bioinformatics , D-40225 D\u00fcsseldorf , Germany","institution_ids":["https://openalex.org/I44260953"]},{"raw_affiliation_string":"Department of Genome Sciences, University of Washington","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"School of Medicine, Seattle, WA 98195, USA","institution_ids":["https://openalex.org/I58610484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008364714","display_name":"Marc Jan Bonder","orcid":"https://orcid.org/0000-0002-8431-3180"},"institutions":[{"id":"https://openalex.org/I126744593","display_name":"University of Maryland, Baltimore","ror":"https://ror.org/04rq5mt64","country_code":"US","type":"education","lineage":["https://openalex.org/I126744593"]},{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I4210138560","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/03mstc592","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I4210151791","display_name":"Genomics (United Kingdom)","ror":"https://ror.org/053a6xa29","country_code":"GB","type":"company","lineage":["https://openalex.org/I4210151791"]},{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN","DE","GB","US"],"is_corresponding":false,"raw_author_name":"Marc Jan Bonder","raw_affiliation_strings":["Division of Computational Genomics and Systems Genetics, German Cancer Research Center (DKFZ) , D-69120 Heidelberg , Germany","European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany","Division of Computational Genomics and Systems Genetics,","Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA","MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an 710049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Computational Genomics and Systems Genetics, German Cancer Research Center (DKFZ) , D-69120 Heidelberg , Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany","institution_ids":["https://openalex.org/I4210138560"]},{"raw_affiliation_string":"Division of Computational Genomics and Systems Genetics,","institution_ids":["https://openalex.org/I4210151791"]},{"raw_affiliation_string":"Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA","institution_ids":["https://openalex.org/I126744593"]},{"raw_affiliation_string":"MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078107141","display_name":"Arvis Sulovari","orcid":"https://orcid.org/0000-0003-4354-9020"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I4210121771","display_name":"First Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/02tbvhh96","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121771"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Arvis Sulovari","raw_affiliation_strings":["Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98195-5065 , USA","Precision Medicine Center, the First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China","School of Medicine, Seattle, WA 98195, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98195-5065 , USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Precision Medicine Center, the First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China","institution_ids":["https://openalex.org/I4210121771"]},{"raw_affiliation_string":"School of Medicine, Seattle, WA 98195, USA","institution_ids":["https://openalex.org/I58610484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077819335","display_name":"Jana Ebler","orcid":"https://orcid.org/0000-0002-0382-3702"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]},{"id":"https://openalex.org/I4405260184","display_name":"The Jackson Laboratory for Genomic Medicine","ror":"https://ror.org/03cew3973","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]},{"id":"https://openalex.org/I44260953","display_name":"Heinrich Heine University D\u00fcsseldorf","ror":"https://ror.org/024z2rq82","country_code":"DE","type":"education","lineage":["https://openalex.org/I44260953"]}],"countries":["DE","US"],"is_corresponding":false,"raw_author_name":"Jana Ebler","raw_affiliation_strings":["Heinrich Heine University ,Medical Faculty, Institute for Medical Biometry and Bioinformatics , D-40225 D\u00fcsseldorf , Germany","The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Heinrich Heine University ,Medical Faculty, Institute for Medical Biometry and Bioinformatics , D-40225 D\u00fcsseldorf , Germany","institution_ids":["https://openalex.org/I44260953"]},{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA","institution_ids":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059450767","display_name":"Weichen Zhou","orcid":"https://orcid.org/0000-0003-4755-1072"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]},{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Weichen Zhou","raw_affiliation_strings":["Department of Computational Medicine & Bioinformatics, University of Michigan , Ann Arbor, MI, 48109 , USA","School of Computer Science and Technology, Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an 710049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computational Medicine & Bioinformatics, University of Michigan , Ann Arbor, MI, 48109 , USA","institution_ids":["https://openalex.org/I27837315"]},{"raw_affiliation_string":"School of Computer Science and Technology, Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036833713","display_name":"Rebecca Serra Mari","orcid":"https://orcid.org/0000-0002-2812-9653"},"institutions":[{"id":"https://openalex.org/I44260953","display_name":"Heinrich Heine University D\u00fcsseldorf","ror":"https://ror.org/024z2rq82","country_code":"DE","type":"education","lineage":["https://openalex.org/I44260953"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Rebecca Serra Mari","raw_affiliation_strings":["Heinrich Heine University, Medical Faculty, Institute for Medical Biometry and Bioinformatics , D-40225 D\u00fcsseldorf , Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Heinrich Heine University, Medical Faculty, Institute for Medical Biometry and Bioinformatics , D-40225 D\u00fcsseldorf , Germany","institution_ids":["https://openalex.org/I44260953"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056498466","display_name":"Feyza Y\u0131lmaz","orcid":"https://orcid.org/0000-0002-6989-2823"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]},{"id":"https://openalex.org/I4405260184","display_name":"The Jackson Laboratory for Genomic Medicine","ror":"https://ror.org/03cew3973","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Feyza Yilmaz","raw_affiliation_strings":["The Jackson Laboratory for Genomic Medicine , Farmington, CT, 06030 , USA","Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA 98119, USA","The Jackson Laboratory for Genomic Medicine, Farmington, CT 06030, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine , Farmington, CT, 06030 , USA","institution_ids":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]},{"raw_affiliation_string":"Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA 98119, USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine, Farmington, CT 06030, USA","institution_ids":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082602991","display_name":"Xuefang Zhao","orcid":"https://orcid.org/0000-0003-4036-9577"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210087915","display_name":"Massachusetts General Hospital","ror":"https://ror.org/002pd6e78","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087915","https://openalex.org/I48633490"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"Xuefang Zhao","raw_affiliation_strings":["Center for Genomic Medicine, Massachusetts General Hospital, Department of Neurology, Harvard Medical School , Boston, MA, 02114 , USA","Leiden Institute of Advanced Computer Science, Faculty of Science, Leiden University, Leiden 2311EZ, Netherland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Genomic Medicine, Massachusetts General Hospital, Department of Neurology, Harvard Medical School , Boston, MA, 02114 , USA","institution_ids":["https://openalex.org/I136199984","https://openalex.org/I4210087915"]},{"raw_affiliation_string":"Leiden Institute of Advanced Computer Science, Faculty of Science, Leiden University, Leiden 2311EZ, Netherland","institution_ids":["https://openalex.org/I121797337"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061843819","display_name":"PingHsun Hsieh","orcid":"https://orcid.org/0000-0001-8294-6227"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I4210121771","display_name":"First Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/02tbvhh96","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121771"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"PingHsun Hsieh","raw_affiliation_strings":["Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98195-5065 , USA","Precision Medicine Center, the First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China","School of Medicine, Seattle, WA 98195, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98195-5065 , USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Precision Medicine Center, the First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China","institution_ids":["https://openalex.org/I4210121771"]},{"raw_affiliation_string":"School of Medicine, Seattle, WA 98195, USA","institution_ids":["https://openalex.org/I58610484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100764481","display_name":"Joyce Lee","orcid":"https://orcid.org/0000-0002-3492-1102"},"institutions":[{"id":"https://openalex.org/I1344073410","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I4210099505","display_name":"BioNano Genomics (United States)","ror":"https://ror.org/014pv7733","country_code":"US","type":"company","lineage":["https://openalex.org/I4210099505"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joyce Lee","raw_affiliation_strings":["Bionano Genomics , San Diego, CA, 92121 , USA","Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bionano Genomics , San Diego, CA, 92121 , USA","institution_ids":["https://openalex.org/I4210099505"]},{"raw_affiliation_string":"Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA","institution_ids":["https://openalex.org/I1344073410","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050503665","display_name":"Sushant Kumar","orcid":"https://orcid.org/0000-0002-7983-6761"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]},{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Sushant Kumar","raw_affiliation_strings":["Program in Computational Biology and Bioinformatics, Yale University , New Haven, CT, 06520 , USA","School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an 710049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Program in Computational Biology and Bioinformatics, Yale University , New Haven, CT, 06520 , USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038740400","display_name":"Tobias Rausch","orcid":"https://orcid.org/0000-0001-5773-5620"},"institutions":[{"id":"https://openalex.org/I4210138560","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/03mstc592","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tobias Rausch","raw_affiliation_strings":["European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany","institution_ids":["https://openalex.org/I4210138560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100401975","display_name":"Yu Chen","orcid":"https://orcid.org/0000-0001-9367-495X"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"education","lineage":["https://openalex.org/I32389192"]},{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]},{"id":"https://openalex.org/I4405260184","display_name":"The Jackson Laboratory for Genomic Medicine","ror":"https://ror.org/03cew3973","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yu Chen","raw_affiliation_strings":["Department of Genetics and Informatics Institute, School of Medicine, University of Alabama at Birmingham , Birmingham, AL, 35294 , USA","The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics and Informatics Institute, School of Medicine, University of Alabama at Birmingham , Birmingham, AL, 35294 , USA","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA","institution_ids":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043524225","display_name":"Zechen Chong","orcid":"https://orcid.org/0000-0001-5750-1808"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"education","lineage":["https://openalex.org/I32389192"]},{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Zechen Chong","raw_affiliation_strings":["Department of Genetics and Informatics Institute, School of Medicine, University of Alabama at Birmingham , Birmingham, AL, 35294 , USA","The School of Life Science and Technology, Xi'an Jiaotong University, Xi'an 710049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics and Informatics Institute, School of Medicine, University of Alabama at Birmingham , Birmingham, AL, 35294 , USA","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"The School of Life Science and Technology, Xi'an Jiaotong University, Xi'an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082886367","display_name":"Katherine M. Munson","orcid":"https://orcid.org/0000-0001-8413-6498"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I4210121771","display_name":"First Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/02tbvhh96","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121771"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Katherine M. Munson","raw_affiliation_strings":["Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98195-5065 , USA","Precision Medicine Center, the First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China","School of Medicine, Seattle, WA 98195, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98195-5065 , USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Precision Medicine Center, the First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China","institution_ids":["https://openalex.org/I4210121771"]},{"raw_affiliation_string":"School of Medicine, Seattle, WA 98195, USA","institution_ids":["https://openalex.org/I58610484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026460408","display_name":"Mark Chaisson","orcid":"https://orcid.org/0000-0001-5395-1457"},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark J.P. Chaisson","raw_affiliation_strings":["Molecular and Computational Biology, University of Southern California , Los Angeles, CA, 90089 , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular and Computational Biology, University of Southern California , Los Angeles, CA, 90089 , USA","institution_ids":["https://openalex.org/I1174212"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100365536","display_name":"Junjie Chen","orcid":"https://orcid.org/0000-0002-0483-303X"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]},{"id":"https://openalex.org/I4210121771","display_name":"First Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/02tbvhh96","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121771"]},{"id":"https://openalex.org/I4405260184","display_name":"The Jackson Laboratory for Genomic Medicine","ror":"https://ror.org/03cew3973","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]},{"id":"https://openalex.org/I84392919","display_name":"Temple University","ror":"https://ror.org/00kx1jb78","country_code":"US","type":"education","lineage":["https://openalex.org/I84392919"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Junjie Chen","raw_affiliation_strings":["Department of Computer & Information Sciences, Temple University , Philadelphia, PA, 19122 , USA","Precision Medicine Center, the First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China","The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer & Information Sciences, Temple University , Philadelphia, PA, 19122 , USA","institution_ids":["https://openalex.org/I84392919"]},{"raw_affiliation_string":"Precision Medicine Center, the First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China","institution_ids":["https://openalex.org/I4210121771"]},{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA","institution_ids":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103054154","display_name":"Xinghua Shi","orcid":"https://orcid.org/0000-0003-4662-3177"},"institutions":[{"id":"https://openalex.org/I84392919","display_name":"Temple University","ror":"https://ror.org/00kx1jb78","country_code":"US","type":"education","lineage":["https://openalex.org/I84392919"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xinghua Shi","raw_affiliation_strings":["Department of Computer & Information Sciences, Temple University , Philadelphia, PA, 19122 , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer & Information Sciences, Temple University , Philadelphia, PA, 19122 , USA","institution_ids":["https://openalex.org/I84392919"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083782077","display_name":"Aaron M. Wenger","orcid":"https://orcid.org/0000-0003-1183-0432"},"institutions":[{"id":"https://openalex.org/I68554272","display_name":"Pacific Biosciences (United States)","ror":"https://ror.org/00fcszb13","country_code":"US","type":"company","lineage":["https://openalex.org/I68554272"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aaron M. Wenger","raw_affiliation_strings":["Pacific Biosystems of California, Inc , Menlo Park, CA, 94025 , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Pacific Biosystems of California, Inc , Menlo Park, CA, 94025 , USA","institution_ids":["https://openalex.org/I68554272"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006507082","display_name":"William T. Harvey","orcid":"https://orcid.org/0000-0001-9529-1127"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I4210121771","display_name":"First Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/02tbvhh96","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121771"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"William T. Harvey","raw_affiliation_strings":["Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98195-5065 , USA","Precision Medicine Center, the First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China","School of Medicine, Seattle, WA 98195, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98195-5065 , USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Precision Medicine Center, the First Affiliated Hospital of Xi'an Jiaotong University, Xi'an 710061, China","institution_ids":["https://openalex.org/I4210121771"]},{"raw_affiliation_string":"School of Medicine, Seattle, WA 98195, USA","institution_ids":["https://openalex.org/I58610484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115061792","display_name":"Patrick Hansenfeld","orcid":null},"institutions":[{"id":"https://openalex.org/I4210138560","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/03mstc592","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN","DE"],"is_corresponding":false,"raw_author_name":"Patrick Hansenfeld","raw_affiliation_strings":["European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany","MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an 710049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory (EMBL), Genome Biology Unit , D-69117 Heidelberg , Germany","institution_ids":["https://openalex.org/I4210138560"]},{"raw_affiliation_string":"MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an 710049, China","institution_ids":["https://openalex.org/I87445476"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016311889","display_name":"Allison Regier","orcid":"https://orcid.org/0000-0002-1932-8714"},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Allison Regier","raw_affiliation_strings":["Washington University , St. Louis, MO, 63108 , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Washington University , St. Louis, MO, 63108 , USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026920706","display_name":"Ira M. Hall","orcid":"https://orcid.org/0000-0003-4442-6655"},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ira M. Hall","raw_affiliation_strings":["Washington University , St. Louis, MO, 63108 , USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Washington University , St. Louis, MO, 63108 , USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006816272","display_name":"Paul Flicek","orcid":"https://orcid.org/0000-0002-3897-7955"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Paul Flicek","raw_affiliation_strings":["European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus , Hinxton, Cambridge, CB10 1SD , United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus , Hinxton, Cambridge, CB10 1SD , United Kingdom","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028045530","display_name":"Alex Hastie","orcid":"https://orcid.org/0000-0001-5829-2649"},"institutions":[{"id":"https://openalex.org/I1344073410","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I4210099505","display_name":"BioNano Genomics (United States)","ror":"https://ror.org/014pv7733","country_code":"US","type":"company","lineage":["https://openalex.org/I4210099505"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alex R. Hastie","raw_affiliation_strings":["Bionano Genomics , San Diego, CA, 92121 , USA","Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bionano Genomics , San Diego, CA, 92121 , USA","institution_ids":["https://openalex.org/I4210099505"]},{"raw_affiliation_string":"Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA","institution_ids":["https://openalex.org/I1344073410","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5099625859","display_name":"Susan Fairely","orcid":null},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Susan Fairely","raw_affiliation_strings":["European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus , Hinxton, Cambridge, CB10 1SD , United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus , Hinxton, Cambridge, CB10 1SD , United Kingdom","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101954659","display_name":"Chengsheng Zhang","orcid":"https://orcid.org/0000-0002-5238-083X"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]},{"id":"https://openalex.org/I4210121771","display_name":"First Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/02tbvhh96","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121771"]},{"id":"https://openalex.org/I4405260184","display_name":"The Jackson Laboratory for Genomic Medicine","ror":"https://ror.org/03cew3973","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Chengsheng Zhang","raw_affiliation_strings":["Precision Medicine Center, the First Affiliated Hospital of Xi\u2019an Jiaotong University , Xi\u2019an, 710061 , China","The Jackson Laboratory for Genomic Medicine , Farmington, CT, 06032 , USA"],"raw_orcid":"https://orcid.org/0000-0002-5238-083X","affiliations":[{"raw_affiliation_string":"Precision Medicine Center, the First Affiliated Hospital of Xi\u2019an Jiaotong University , Xi\u2019an, 710061 , China","institution_ids":["https://openalex.org/I4210121771"]},{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine , Farmington, CT, 06032 , USA","institution_ids":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100716198","display_name":"Charles Lee","orcid":"https://orcid.org/0000-0001-7317-6662"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]},{"id":"https://openalex.org/I4210121771","display_name":"First Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/02tbvhh96","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121771"]},{"id":"https://openalex.org/I4405260184","display_name":"The Jackson Laboratory for Genomic Medicine","ror":"https://ror.org/03cew3973","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Charles Lee","raw_affiliation_strings":["Precision Medicine Center, the First Affiliated Hospital of Xi\u2019an Jiaotong University , Xi\u2019an, 710061 , China","The Jackson Laboratory for Genomic Medicine , Farmington, CT, 06032 , USA","Department of Genome Sciences, University of Washington","School of Medicine, Seattle, WA 98195, USA"],"raw_orcid":"https://orcid.org/0000-0001-7317-6662","affiliations":[{"raw_affiliation_string":"Precision Medicine Center, the First Affiliated Hospital of Xi\u2019an Jiaotong University , Xi\u2019an, 710061 , China","institution_ids":["https://openalex.org/I4210121771"]},{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine , Farmington, CT, 06032 , USA","institution_ids":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]},{"raw_affiliation_string":"Department of Genome Sciences, University of Washington","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"School of Medicine, Seattle, WA 98195, USA","institution_ids":["https://openalex.org/I58610484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076192092","display_name":"Scott E. Devine","orcid":"https://orcid.org/0000-0001-7629-8331"},"institutions":[{"id":"https://openalex.org/I126744593","display_name":"University of Maryland, Baltimore","ror":"https://ror.org/04rq5mt64","country_code":"US","type":"education","lineage":["https://openalex.org/I126744593"]},{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]},{"id":"https://openalex.org/I4210151791","display_name":"Genomics (United Kingdom)","ror":"https://ror.org/053a6xa29","country_code":"GB","type":"company","lineage":["https://openalex.org/I4210151791"]},{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN","DE","GB","US"],"is_corresponding":false,"raw_author_name":"Scott E. Devine","raw_affiliation_strings":["Institute for Genome Sciences, University of Maryland School of Medicine , Baltimore, MD, 21201 , USA","School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","Division of Computational Genomics and Systems Genetics,","German Cancer Research Center (DKFZ), D-69120 Heidelberg, Germany","Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT 06520, USA"],"raw_orcid":"https://orcid.org/0000-0001-7629-8331","affiliations":[{"raw_affiliation_string":"Institute for Genome Sciences, University of Maryland School of Medicine , Baltimore, MD, 21201 , USA","institution_ids":["https://openalex.org/I126744593"]},{"raw_affiliation_string":"School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"Division of Computational Genomics and Systems Genetics,","institution_ids":["https://openalex.org/I4210151791"]},{"raw_affiliation_string":"German Cancer Research Center (DKFZ), D-69120 Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT 06520, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014870107","display_name":"Evan E. Eichler","orcid":"https://orcid.org/0000-0002-8246-4014"},"institutions":[{"id":"https://openalex.org/I1344073410","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I4210099505","display_name":"BioNano Genomics (United States)","ror":"https://ror.org/014pv7733","country_code":"US","type":"company","lineage":["https://openalex.org/I4210099505"]},{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]},{"id":"https://openalex.org/I4405260184","display_name":"The Jackson Laboratory for Genomic Medicine","ror":"https://ror.org/03cew3973","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Evan E. Eichler","raw_affiliation_strings":["Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98119 , USA","Howard Hughes Medical Institute, University of Washington , Seattle, WA, 98195 , USA","Bionano Genomics, San Diego, CA 92121, USA","The Jackson Laboratory for Genomic Medicine, Farmington, CT 06030, USA"],"raw_orcid":"https://orcid.org/0000-0002-8246-4014","affiliations":[{"raw_affiliation_string":"Department of Genome Sciences, University of Washington School of Medicine , Seattle, WA, 98119 , USA","institution_ids":["https://openalex.org/I201448701"]},{"raw_affiliation_string":"Howard Hughes Medical Institute, University of Washington , Seattle, WA, 98195 , USA","institution_ids":["https://openalex.org/I1344073410","https://openalex.org/I201448701"]},{"raw_affiliation_string":"Bionano Genomics, San Diego, CA 92121, USA","institution_ids":["https://openalex.org/I4210099505"]},{"raw_affiliation_string":"The Jackson Laboratory for Genomic Medicine, Farmington, CT 06030, USA","institution_ids":["https://openalex.org/I4210115256","https://openalex.org/I4405260184"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032548139","display_name":"Kai Ye","orcid":"https://orcid.org/0000-0002-2851-6741"},"institutions":[{"id":"https://openalex.org/I32389192","display_name":"University of Alabama at Birmingham","ror":"https://ror.org/008s83205","country_code":"US","type":"education","lineage":["https://openalex.org/I32389192"]},{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]},{"id":"https://openalex.org/I4210121771","display_name":"First Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/02tbvhh96","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121771"]},{"id":"https://openalex.org/I4210138560","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/03mstc592","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I4210151462","display_name":"New York Genome Center","ror":"https://ror.org/05wf2ga96","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210151462"]},{"id":"https://openalex.org/I87445476","display_name":"Xi'an Jiaotong University","ror":"https://ror.org/017zhmm22","country_code":"CN","type":"education","lineage":["https://openalex.org/I87445476"]}],"countries":["CN","DE","US"],"is_corresponding":true,"raw_author_name":"Kai Ye","raw_affiliation_strings":["Genome Institute, the First Affiliated Hospital of Xi\u2019an Jiaotong University , Xi\u2019an, 710061 , China","MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","The School of Life Science and Technology, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","Department of Genetics and Informatics Institute, School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA","European Molecular Biology Laboratory (EMBL), Genome Biology Unit, D-69117 Heidelberg, Germany","New York Genome Center, New York, NY 10013, USA","Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT 06520, USA"],"raw_orcid":"https://orcid.org/0000-0002-2851-6741","affiliations":[{"raw_affiliation_string":"Genome Institute, the First Affiliated Hospital of Xi\u2019an Jiaotong University , Xi\u2019an, 710061 , China","institution_ids":["https://openalex.org/I4210121771"]},{"raw_affiliation_string":"MOE Key Lab for Intelligent Networks & Networks Security, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"School of Automation Science and Engineering, Faculty of Electronic and Information Engineering, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"The School of Life Science and Technology, Xi\u2019an Jiaotong University , Xi\u2019an, 710049 , China","institution_ids":["https://openalex.org/I87445476"]},{"raw_affiliation_string":"Department of Genetics and Informatics Institute, School of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA","institution_ids":["https://openalex.org/I32389192"]},{"raw_affiliation_string":"European Molecular Biology Laboratory (EMBL), Genome Biology Unit, D-69117 Heidelberg, Germany","institution_ids":["https://openalex.org/I4210138560"]},{"raw_affiliation_string":"New York Genome Center, New York, NY 10013, USA","institution_ids":["https://openalex.org/I4210151462"]},{"raw_affiliation_string":"Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT 06520, USA","institution_ids":["https://openalex.org/I32971472"]}]}],"institutions":[],"countries_distinct_count":5,"institutions_distinct_count":26,"corresponding_author_ids":["https://openalex.org/A5032548139"],"corresponding_institution_ids":["https://openalex.org/I32389192","https://openalex.org/I32971472","https://openalex.org/I4210121771","https://openalex.org/I4210138560","https://openalex.org/I4210151462","https://openalex.org/I87445476"],"apc_list":{"value":3650,"currency":"USD","value_usd":3650},"apc_paid":{"value":3650,"currency":"USD","value_usd":3650},"fwci":0.6653,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.65891527,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"20","issue":"1","first_page":"205","last_page":"218"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/breakpoint","display_name":"Breakpoint","score":0.7505845427513123},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5207626819610596},{"id":"https://openalex.org/keywords/gene-duplication","display_name":"Gene duplication","score":0.4508591890335083},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.43635299801826477},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3402627110481262},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.33597907423973083},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33153554797172546},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.31844955682754517},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23548129200935364},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17012172937393188},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.135245680809021},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.09455782175064087},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.08086314797401428}],"concepts":[{"id":"https://openalex.org/C206936463","wikidata":"https://www.wikidata.org/wiki/Q634179","display_name":"Breakpoint","level":4,"score":0.7505845427513123},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5207626819610596},{"id":"https://openalex.org/C7602840","wikidata":"https://www.wikidata.org/wiki/Q746284","display_name":"Gene duplication","level":3,"score":0.4508591890335083},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.43635299801826477},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3402627110481262},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.33597907423973083},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33153554797172546},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.31844955682754517},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23548129200935364},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17012172937393188},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.135245680809021},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.09455782175064087},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.08086314797401428}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1016/j.gpb.2021.03.007","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.gpb.2021.03.007","pdf_url":"https://www.sciencedirect.com/science/article/pii/S1672022921001431/pdf","source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34224879","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34224879","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, proteomics & bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9510932","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9510932","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Genomics Proteomics Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:513b1cf5af894e5190b4427f8d55b1a7","is_oa":true,"landing_page_url":"https://doaj.org/article/513b1cf5af894e5190b4427f8d55b1a7","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Genomics, Proteomics & Bioinformatics, Vol 20, Iss 1, Pp 205-218 (2022)","raw_type":"article"},{"id":"pmh:oai:mouseion.jax.org:stfb2022-1213","is_oa":true,"landing_page_url":"https://mouseion.jax.org/stfb2022/213","pdf_url":null,"source":{"id":"https://openalex.org/S4377196421","display_name":"The Mouseion at the JAXlibrary (Jackson Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210115256","host_organization_name":"Jackson Laboratory","host_organization_lineage":["https://openalex.org/I4210115256"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty Research 2022","raw_type":"text"},{"id":"pmh:oai:mouseion.jax.org:stfbaop-1293","is_oa":false,"landing_page_url":"https://mouseion.jax.org/stfbaop/300","pdf_url":null,"source":{"id":"https://openalex.org/S4377196421","display_name":"The Mouseion at the JAXlibrary (Jackson Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210115256","host_organization_name":"Jackson Laboratory","host_organization_lineage":["https://openalex.org/I4210115256"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty Research Ahead of Print","raw_type":"text"},{"id":"pmh:oai:scholarlypublications.universiteitleiden.nl:item_3275291","is_oa":true,"landing_page_url":"https://hdl.handle.net/1887/3275291","pdf_url":null,"source":{"id":"https://openalex.org/S4306400850","display_name":"Leiden Repository (Leiden University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I121797337","host_organization_name":"Leiden University","host_organization_lineage":["https://openalex.org/I121797337"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Genomics, Proteomics and Bioinformatics","raw_type":"Article / Letter to editor"},{"id":"pmh:ul:oai:scholarlypublications.universiteitleiden.nl:item_3275291","is_oa":true,"landing_page_url":"http://hdl.handle.net/1887/3275291","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Genomics, Proteomics and Bioinformatics, 20(1), 205 - 218","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1016/j.gpb.2021.03.007","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.gpb.2021.03.007","pdf_url":"https://www.sciencedirect.com/science/article/pii/S1672022921001431/pdf","source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1329003439","display_name":null,"funder_award_id":"2018ZX10302205","funder_id":"https://openalex.org/F4320335960","funder_display_name":"National Major Science and Technology Projects of China"},{"id":"https://openalex.org/G1954144383","display_name":null,"funder_award_id":"R01 CA094025","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G278894908","display_name":null,"funder_award_id":"P30CA034196","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G3835011096","display_name":null,"funder_award_id":"2018YFC0910400","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3972499691","display_name":null,"funder_award_id":"R01HG002898","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G4700363654","display_name":null,"funder_award_id":"U24 HG007497","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G4983681036","display_name":null,"funder_award_id":"31701739","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G598336005","display_name":null,"funder_award_id":"2017SHZDZX01","funder_id":"https://openalex.org/F4320321885","funder_display_name":"Science and Technology Commission of Shanghai Municipality"},{"id":"https://openalex.org/G6044760167","display_name":null,"funder_award_id":"2017SHZDZX01","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6211745798","display_name":null,"funder_award_id":"R35 GM138212","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G6507085462","display_name":null,"funder_award_id":"2017YFC0907500","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6544905218","display_name":null,"funder_award_id":"31671372","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7850370290","display_name":null,"funder_award_id":"2017YFC0907500","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G8199531049","display_name":null,"funder_award_id":"61702406","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G97718501","display_name":null,"funder_award_id":"2018YFC0910400","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321885","display_name":"Science and Technology Commission of Shanghai Municipality","ror":"https://ror.org/03kt66j61"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null},{"id":"https://openalex.org/F4320335960","display_name":"National Major Science and Technology Projects of China","ror":null},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3179290680.pdf","grobid_xml":"https://content.openalex.org/works/W3179290680.grobid-xml"},"referenced_works_count":54,"referenced_works":["https://openalex.org/W1912672559","https://openalex.org/W1975544062","https://openalex.org/W1978659600","https://openalex.org/W1992251814","https://openalex.org/W2000151507","https://openalex.org/W2011484895","https://openalex.org/W2011957420","https://openalex.org/W2015236057","https://openalex.org/W2041937775","https://openalex.org/W2042272913","https://openalex.org/W2052496634","https://openalex.org/W2065817684","https://openalex.org/W2093931624","https://openalex.org/W2095685450","https://openalex.org/W2103441770","https://openalex.org/W2107830007","https://openalex.org/W2111350087","https://openalex.org/W2120117766","https://openalex.org/W2139426393","https://openalex.org/W2146005104","https://openalex.org/W2148399176","https://openalex.org/W2150194381","https://openalex.org/W2154397429","https://openalex.org/W2168196587","https://openalex.org/W2194510225","https://openalex.org/W2235737683","https://openalex.org/W2289509647","https://openalex.org/W2413207085","https://openalex.org/W2515472395","https://openalex.org/W2550122327","https://openalex.org/W2555719318","https://openalex.org/W2567987817","https://openalex.org/W2589834155","https://openalex.org/W2611922188","https://openalex.org/W2661022803","https://openalex.org/W2746672093","https://openalex.org/W2763162506","https://openalex.org/W2766113156","https://openalex.org/W2800503833","https://openalex.org/W2884001931","https://openalex.org/W2902555008","https://openalex.org/W2905517925","https://openalex.org/W2921264463","https://openalex.org/W2947095040","https://openalex.org/W2948024819","https://openalex.org/W2949062400","https://openalex.org/W2950121474","https://openalex.org/W2950214184","https://openalex.org/W2951745476","https://openalex.org/W2951874439","https://openalex.org/W2963186762","https://openalex.org/W2970098032","https://openalex.org/W2980310926","https://openalex.org/W2994758158"],"related_works":["https://openalex.org/W2036289360","https://openalex.org/W2003824598","https://openalex.org/W2606481030","https://openalex.org/W2123012074","https://openalex.org/W1979375946","https://openalex.org/W4388014327","https://openalex.org/W2117117412","https://openalex.org/W1554401503","https://openalex.org/W2093773491","https://openalex.org/W2161263170"],"abstract_inverted_index":{"Complex":[0],"structural":[1,22,54],"variants":[2],"(CSVs)":[3],"are":[4,14,139,151],"genomic":[5],"alterations":[6],"that":[7,115],"have":[8],"more":[9],"than":[10],"two":[11,181],"breakpoints":[12],"and":[13,66,97,111,131,147,154,172,188],"considered":[15],"as":[16,134,136],"the":[17,26,60,91,143,159,165,199,205],"simultaneous":[18],"occurrence":[19],"of":[20,30,64,123,145,168,176,184,194,201,207],"simple":[21,53],"variants.":[23,55],"However,":[24],"detecting":[25],"compounded":[27],"mutational":[28],"signals":[29],"CSVs":[31,77,124,196],"is":[32,210],"challenging":[33],"through":[34],"a":[35,41,70,85,169,174],"commonly":[36],"used":[37],"model-match":[38],"strategy.":[39],"As":[40],"result,":[42],"there":[43],"has":[44],"been":[45],"limited":[46],"progress":[47],"for":[48],"CSV":[49,101,161,170,178],"discovery":[50],"compared":[51],"with":[52],"Here,":[56],"we":[57,83],"systematically":[58],"analyzed":[59],"multi-breakpoint":[61],"connection":[62],"feature":[63],"CSVs,":[65],"proposed":[67],"Mako,":[68],"utilizing":[69],"bottom-up":[71],"guided":[72],"model-free":[73],"strategy,":[74],"to":[75],"detect":[76],"from":[78],"paired-end":[79],"short-read":[80],"sequencing.":[81],"Specifically,":[82],"implemented":[84],"graph-based":[86],"pattern":[87,98],"growth":[88,99],"approach,":[89],"where":[90,142],"graph":[92],"depicts":[93],"potential":[94],"breakpoint":[95,149,166],"connections,":[96],"enables":[100],"detection":[102],"without":[103],"pre-defined":[104],"models.":[105],"Comprehensive":[106],"evaluations":[107],"on":[108,125,129,204],"both":[109],"simulated":[110],"real":[112,126],"datasets":[113],"revealed":[114,198],"Mako":[116,160,209],"outperformed":[117],"other":[118],"algorithms.":[119],"Notably,":[120],"validation":[121],"rates":[122],"data":[127],"based":[128],"experimental":[130,146],"computational":[132,148],"validations":[133],"well":[135],"manual":[137],"inspections":[138],"around":[140],"70%,":[141],"medians":[144],"shift":[150],"13":[152],"bp":[153],"26":[155],"bp,":[156],"respectively.":[157],"Moreover,":[158],"subgraph":[162],"effectively":[163],"characterized":[164],"connections":[167],"event":[171],"uncovered":[173],"total":[175],"15":[177],"types,":[179],"including":[180],"novel":[182],"types":[183],"adjacent":[185],"segment":[186],"swap":[187],"tandem":[189],"dispersed":[190],"duplication.":[191],"Further":[192],"analysis":[193],"these":[195],"also":[197],"impact":[200],"sequence":[202],"homology":[203],"formation":[206],"CSVs.":[208],"publicly":[211],"available":[212],"at":[213],"https://github.com/xjtu-omics/Mako.":[214]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
