{"id":"https://openalex.org/W3033368660","doi":"https://doi.org/10.1016/j.gpb.2020.03.001","title":"IRESbase: A Comprehensive Database of Experimentally Validated Internal Ribosome Entry Sites","display_name":"IRESbase: A Comprehensive Database of Experimentally Validated Internal Ribosome Entry Sites","publication_year":2020,"publication_date":"2020-04-01","ids":{"openalex":"https://openalex.org/W3033368660","doi":"https://doi.org/10.1016/j.gpb.2020.03.001","mag":"3033368660","pmid":"https://pubmed.ncbi.nlm.nih.gov/32512182"},"language":"en","primary_location":{"id":"doi:10.1016/j.gpb.2020.03.001","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.gpb.2020.03.001","pdf_url":null,"source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics & Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1016/j.gpb.2020.03.001","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025609330","display_name":"Jian Zhao","orcid":"https://orcid.org/0000-0001-7857-4766"},"institutions":[{"id":"https://openalex.org/I9842412","display_name":"Nanjing University of Aeronautics and Astronautics","ror":"https://ror.org/01scyh794","country_code":"CN","type":"education","lineage":["https://openalex.org/I9842412"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Zhao","raw_affiliation_strings":["Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics , Nanjing 211106 , China"],"raw_orcid":"https://orcid.org/0000-0001-7857-4766","affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics , Nanjing 211106 , China","institution_ids":["https://openalex.org/I9842412"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100380408","display_name":"Yan Li","orcid":"https://orcid.org/0000-0003-0420-4222"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yan Li","raw_affiliation_strings":["Center of Pathology and Clinical Laboratory, Sir Run Run Hospital, Nanjing Medical University , Nanjing 211166 , China","State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University , Nanjing 211166 , China"],"raw_orcid":"https://orcid.org/0000-0003-0420-4222","affiliations":[{"raw_affiliation_string":"Center of Pathology and Clinical Laboratory, Sir Run Run Hospital, Nanjing Medical University , Nanjing 211166 , China","institution_ids":["https://openalex.org/I83519826"]},{"raw_affiliation_string":"State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University , Nanjing 211166 , China","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025109747","display_name":"Cong Wang","orcid":"https://orcid.org/0000-0003-4669-9702"},"institutions":[{"id":"https://openalex.org/I9842412","display_name":"Nanjing University of Aeronautics and Astronautics","ror":"https://ror.org/01scyh794","country_code":"CN","type":"education","lineage":["https://openalex.org/I9842412"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Cong Wang","raw_affiliation_strings":["Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics , Nanjing 211106 , China"],"raw_orcid":"https://orcid.org/0000-0003-4669-9702","affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics , Nanjing 211106 , China","institution_ids":["https://openalex.org/I9842412"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100392963","display_name":"Haotian Zhang","orcid":"https://orcid.org/0000-0002-7181-0962"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haotian Zhang","raw_affiliation_strings":["State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University , Nanjing 211166 , China"],"raw_orcid":"https://orcid.org/0000-0002-7181-0962","affiliations":[{"raw_affiliation_string":"State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University , Nanjing 211166 , China","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100396798","display_name":"Hao Zhang","orcid":"https://orcid.org/0000-0001-7043-5438"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hao Zhang","raw_affiliation_strings":["State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University , Nanjing 211166 , China"],"raw_orcid":"https://orcid.org/0000-0001-7043-5438","affiliations":[{"raw_affiliation_string":"State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University , Nanjing 211166 , China","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052042524","display_name":"Bin Jiang","orcid":"https://orcid.org/0000-0002-1156-2557"},"institutions":[{"id":"https://openalex.org/I9842412","display_name":"Nanjing University of Aeronautics and Astronautics","ror":"https://ror.org/01scyh794","country_code":"CN","type":"education","lineage":["https://openalex.org/I9842412"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bin Jiang","raw_affiliation_strings":["College of Automation Engineering, Nanjing University of Aeronautics and Astronautics , Nanjing 211106 , China"],"raw_orcid":"https://orcid.org/0000-0002-1156-2557","affiliations":[{"raw_affiliation_string":"College of Automation Engineering, Nanjing University of Aeronautics and Astronautics , Nanjing 211106 , China","institution_ids":["https://openalex.org/I9842412"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061220138","display_name":"Xuejiang Guo","orcid":"https://orcid.org/0000-0002-0475-5705"},"institutions":[{"id":"https://openalex.org/I83519826","display_name":"Nanjing Medical University","ror":"https://ror.org/059gcgy73","country_code":"CN","type":"education","lineage":["https://openalex.org/I83519826"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xuejiang Guo","raw_affiliation_strings":["State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University , Nanjing 211166 , China"],"raw_orcid":"https://orcid.org/0000-0002-0475-5705","affiliations":[{"raw_affiliation_string":"State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University , Nanjing 211166 , China","institution_ids":["https://openalex.org/I83519826"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013359542","display_name":"Xiaofeng Song","orcid":"https://orcid.org/0000-0001-7445-4302"},"institutions":[{"id":"https://openalex.org/I9842412","display_name":"Nanjing University of Aeronautics and Astronautics","ror":"https://ror.org/01scyh794","country_code":"CN","type":"education","lineage":["https://openalex.org/I9842412"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiaofeng Song","raw_affiliation_strings":["Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics , Nanjing 211106 , China"],"raw_orcid":"https://orcid.org/0000-0001-7445-4302","affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics , Nanjing 211106 , China","institution_ids":["https://openalex.org/I9842412"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5013359542","https://openalex.org/A5061220138"],"corresponding_institution_ids":["https://openalex.org/I83519826","https://openalex.org/I9842412"],"apc_list":{"value":3500,"currency":"USD","value_usd":3500},"apc_paid":{"value":3500,"currency":"USD","value_usd":3500},"fwci":9.608,"has_fulltext":false,"cited_by_count":119,"citation_normalized_percentile":{"value":0.98707229,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"18","issue":"2","first_page":"129","last_page":"139"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11112","display_name":"Viral Infections and Immunology Research","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11112","display_name":"Viral Infections and Immunology Research","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.6357364654541016},{"id":"https://openalex.org/keywords/ribosome","display_name":"Ribosome","score":0.500762939453125},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.44372236728668213},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4017561376094818},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2480641007423401},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11160025000572205},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.08941000699996948},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.050067245960235596}],"concepts":[{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.6357364654541016},{"id":"https://openalex.org/C88478588","wikidata":"https://www.wikidata.org/wiki/Q42244","display_name":"Ribosome","level":4,"score":0.500762939453125},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.44372236728668213},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4017561376094818},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2480641007423401},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11160025000572205},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.08941000699996948},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.050067245960235596}],"mesh":[{"descriptor_ui":"D000067556","descriptor_name":"Internal Ribosome Entry Sites","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000067556","descriptor_name":"Internal Ribosome Entry Sites","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000067556","descriptor_name":"Internal Ribosome Entry Sites","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012270","descriptor_name":"Ribosomes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012270","descriptor_name":"Ribosomes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012270","descriptor_name":"Ribosomes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014176","descriptor_name":"Protein Biosynthesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014176","descriptor_name":"Protein Biosynthesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014176","descriptor_name":"Protein Biosynthesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1016/j.gpb.2020.03.001","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.gpb.2020.03.001","pdf_url":null,"source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics & Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32512182","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32512182","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, proteomics & bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:d35cce51990e4e32a45834bcab40e0f6","is_oa":true,"landing_page_url":"https://doaj.org/article/d35cce51990e4e32a45834bcab40e0f6","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Genomics, Proteomics & Bioinformatics, Vol 18, Iss 2, Pp 129-139 (2020)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7646085","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7646085","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Genomics Proteomics Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1016/j.gpb.2020.03.001","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.gpb.2020.03.001","pdf_url":null,"source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics & Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G236871695","display_name":null,"funder_award_id":"81771641","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4637690763","display_name":null,"funder_award_id":"NP2018109","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G547705090","display_name":null,"funder_award_id":"61973155","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7551478936","display_name":null,"funder_award_id":"2016YFA0503300","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G7811080718","display_name":null,"funder_award_id":"81971439","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8340427798","display_name":null,"funder_award_id":"61571223","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8771433943","display_name":null,"funder_award_id":"161037","funder_id":"https://openalex.org/F4320326297","funder_display_name":"Fok Ying Tung Education Foundation"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320326297","display_name":"Fok Ying Tung Education Foundation","ror":null},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W1807212217","https://openalex.org/W1930997309","https://openalex.org/W1966690209","https://openalex.org/W1969142598","https://openalex.org/W1970949525","https://openalex.org/W1980401374","https://openalex.org/W2044832480","https://openalex.org/W2048194168","https://openalex.org/W2048731469","https://openalex.org/W2081053429","https://openalex.org/W2094813328","https://openalex.org/W2102518477","https://openalex.org/W2103250001","https://openalex.org/W2104967386","https://openalex.org/W2106730818","https://openalex.org/W2115662330","https://openalex.org/W2120296922","https://openalex.org/W2120425978","https://openalex.org/W2122057882","https://openalex.org/W2122732537","https://openalex.org/W2128016314","https://openalex.org/W2130479394","https://openalex.org/W2141545183","https://openalex.org/W2146341019","https://openalex.org/W2149148435","https://openalex.org/W2159482845","https://openalex.org/W2171681733","https://openalex.org/W2173732482","https://openalex.org/W2191641478","https://openalex.org/W2234324103","https://openalex.org/W2333784672","https://openalex.org/W2400736273","https://openalex.org/W2484917680","https://openalex.org/W2530008209","https://openalex.org/W2592988313","https://openalex.org/W2600581473","https://openalex.org/W2601436215","https://openalex.org/W2733985479","https://openalex.org/W2752880228","https://openalex.org/W2762279748","https://openalex.org/W2766848373","https://openalex.org/W2783029521","https://openalex.org/W2897137698","https://openalex.org/W2915667579","https://openalex.org/W2925033480","https://openalex.org/W2944606734","https://openalex.org/W4234914623"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W1499159835","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W1993362141","https://openalex.org/W4396701345","https://openalex.org/W2376932109"],"abstract_inverted_index":{"Internal":[0],"ribosome":[1],"entry":[2],"sites":[3],"(IRESs)":[4],"are":[5],"functional":[6,96,143],"RNA":[7,52],"elements":[8,30,70,99],"that":[9],"can":[10],"directly":[11],"recruit":[12],"ribosomes":[13],"to":[14,25,58,158,173],"an":[15,64],"internal":[16],"position":[17],"of":[18,45,49,68,89,113,139,148],"the":[19,93,145],"mRNA":[20],"in":[21,39,150],"a":[22,46,86],"cap-independent":[23],"manner":[24],"initiate":[26],"translation.":[27,62],"Recently,":[28],"IRES":[29,69,98,138,181],"have":[31],"attracted":[32],"much":[33],"attention":[34],"for":[35,77],"their":[36,104],"critical":[37],"roles":[38],"various":[40],"processes":[41],"including":[42,118],"translation":[43],"initiation":[44],"new":[47],"type":[48],"RNA,":[50],"circular":[51,108],"(circRNA),":[53],"with":[54,71,142],"no":[55],"5'":[56],"cap":[57],"support":[59],"classical":[60],"cap-dependent":[61],"Thus,":[63],"integrative":[65],"data":[66],"resource":[67],"experimental":[72],"evidence":[73],"will":[74],"be":[75],"useful":[76],"further":[78],"studies.":[79],"In":[80],"this":[81],"study,":[82],"we":[83],"present":[84],"IRESbase,":[85],"comprehensive":[87],"database":[88],"IRESs,":[90,117],"by":[91],"curating":[92],"experimentally":[94],"validated":[95],"minimal":[97,140],"from":[100,126],"literature":[101],"and":[102,107,122,130,161,168],"annotating":[103],"host":[105],"linear":[106],"RNAs.":[109],"The":[110],"current":[111],"version":[112],"IRESbase":[114,135,151,183],"contains":[115],"1328":[116],"774":[119],"eukaryotic":[120,128],"IRESs":[121,125,149,157],"554":[123],"viral":[124],"11":[127],"organisms":[129],"198":[131],"viruses,":[132],"respectively.":[133],"As":[134],"collects":[136],"only":[137],"length":[141,147],"evidence,":[144],"median":[146],"is":[152,184],"174":[153],"nucleotides.":[154],"By":[155],"mapping":[156],"human":[159],"circRNAs":[160,167],"long":[162],"non-coding":[163],"RNAs":[164],"(lncRNAs),":[165],"2191":[166],"168":[169],"lncRNAs":[170],"were":[171],"found":[172],"contain":[174],"at":[175,186],"least":[176],"one":[177],"entire":[178],"or":[179],"partial":[180],"sequence.":[182],"available":[185],"http://reprod.njmu.edu.cn/cgi-bin/iresbase/index.php.":[187]},"counts_by_year":[{"year":2026,"cited_by_count":9},{"year":2025,"cited_by_count":28},{"year":2024,"cited_by_count":19},{"year":2023,"cited_by_count":18},{"year":2022,"cited_by_count":17},{"year":2021,"cited_by_count":25},{"year":2020,"cited_by_count":3}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}