{"id":"https://openalex.org/W1970243264","doi":"https://doi.org/10.1016/j.gpb.2014.11.001","title":"<i>In vitro</i> Transcriptome Analysis of Two Chinese Isolates of <i>Streptococcus Suis</i> Serotype 2","display_name":"<i>In vitro</i> Transcriptome Analysis of Two Chinese Isolates of <i>Streptococcus Suis</i> Serotype 2","publication_year":2014,"publication_date":"2014-12-01","ids":{"openalex":"https://openalex.org/W1970243264","doi":"https://doi.org/10.1016/j.gpb.2014.11.001","mag":"1970243264","pmid":"https://pubmed.ncbi.nlm.nih.gov/25526982"},"language":"en","primary_location":{"id":"doi:10.1016/j.gpb.2014.11.001","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.gpb.2014.11.001","pdf_url":"https://www.sciencedirect.com/science/article/pii/S167202291400134X/pdf","source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.sciencedirect.com/science/article/pii/S167202291400134X/pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054287219","display_name":"Dake Zhang","orcid":"https://orcid.org/0000-0001-9508-8209"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I2801577699","display_name":"Beijing Institute of Genomics","ror":"https://ror.org/049gn7z52","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I2801577699"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dake Zhang","raw_affiliation_strings":["CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences , Beijing, 100101 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences , Beijing, 100101 , China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I2801577699"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100721785","display_name":"Nan Du","orcid":"https://orcid.org/0000-0001-8770-0154"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I2801577699","display_name":"Beijing Institute of Genomics","ror":"https://ror.org/049gn7z52","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I2801577699"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Nan Du","raw_affiliation_strings":["CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences , Beijing, 100101 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences , Beijing, 100101 , China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I2801577699"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100847599","display_name":"Sufang Ma","orcid":null},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Sufang Ma","raw_affiliation_strings":["CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences , Beijing, 100101 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences , Beijing, 100101 , China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047617108","display_name":"Qingtao Hu","orcid":"https://orcid.org/0000-0002-8291-7116"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I2801577699","display_name":"Beijing Institute of Genomics","ror":"https://ror.org/049gn7z52","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I2801577699"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qingtao Hu","raw_affiliation_strings":["CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences , Beijing, 100101 , China","University of Chinese Academy of Sciences , Beijing, 100190 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences , Beijing, 100101 , China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I2801577699"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences , Beijing, 100190 , China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067714177","display_name":"Guangwen Lu","orcid":"https://orcid.org/0000-0001-7568-592X"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210134982","display_name":"Institute of Microbiology","ror":"https://ror.org/047yhep71","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guangwen Lu","raw_affiliation_strings":["CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences , Beijing, 100101 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CAS Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences , Beijing, 100101 , China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210134982"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100344489","display_name":"Wei Chen","orcid":"https://orcid.org/0000-0002-8087-7077"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I2801577699","display_name":"Beijing Institute of Genomics","ror":"https://ror.org/049gn7z52","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I2801577699"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Chen","raw_affiliation_strings":["CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences , Beijing, 100101 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences , Beijing, 100101 , China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I2801577699"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009545090","display_name":"Changqing Zeng","orcid":"https://orcid.org/0000-0002-0037-1771"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I2801577699","display_name":"Beijing Institute of Genomics","ror":"https://ror.org/049gn7z52","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I2801577699"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Changqing Zeng","raw_affiliation_strings":["CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences , Beijing, 100101 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences , Beijing, 100101 , China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I2801577699"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5009545090"],"corresponding_institution_ids":["https://openalex.org/I19820366","https://openalex.org/I2801577699"],"apc_list":{"value":3650,"currency":"USD","value_usd":3650},"apc_paid":{"value":3650,"currency":"USD","value_usd":3650},"fwci":0.0,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.10609592,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":98},"biblio":{"volume":"12","issue":"6","first_page":"266","last_page":"275"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11153","display_name":"Streptococcal Infections and Treatments","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11153","display_name":"Streptococcal Infections and Treatments","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.9905999898910522,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.951200008392334,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/virulence","display_name":"Virulence","score":0.8978278636932373},{"id":"https://openalex.org/keywords/streptococcus-suis","display_name":"Streptococcus suis","score":0.8731989860534668},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8030649423599243},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.7042608261108398},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.6744729280471802},{"id":"https://openalex.org/keywords/serotype","display_name":"Serotype","score":0.5811487436294556},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5637466907501221},{"id":"https://openalex.org/keywords/biofilm","display_name":"Biofilm","score":0.4845542013645172},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2911139130592346},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.2732868194580078},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.2519725561141968}],"concepts":[{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.8978278636932373},{"id":"https://openalex.org/C2775976552","wikidata":"https://www.wikidata.org/wiki/Q287694","display_name":"Streptococcus suis","level":4,"score":0.8731989860534668},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8030649423599243},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.7042608261108398},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.6744729280471802},{"id":"https://openalex.org/C10389963","wikidata":"https://www.wikidata.org/wiki/Q848328","display_name":"Serotype","level":2,"score":0.5811487436294556},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5637466907501221},{"id":"https://openalex.org/C58123911","wikidata":"https://www.wikidata.org/wiki/Q467410","display_name":"Biofilm","level":3,"score":0.4845542013645172},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2911139130592346},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.2732868194580078},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.2519725561141968}],"mesh":[{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013290","descriptor_name":"Streptococcal Infections","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013290","descriptor_name":"Streptococcal Infections","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013290","descriptor_name":"Streptococcal Infections","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013290","descriptor_name":"Streptococcal Infections","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D013290","descriptor_name":"Streptococcal Infections","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D013290","descriptor_name":"Streptococcal Infections","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D013290","descriptor_name":"Streptococcal Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D013290","descriptor_name":"Streptococcal Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D013290","descriptor_name":"Streptococcal Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017011","descriptor_name":"Streptococcus suis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017011","descriptor_name":"Streptococcus suis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017011","descriptor_name":"Streptococcus suis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D037521","descriptor_name":"Virulence Factors","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D037521","descriptor_name":"Virulence Factors","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D037521","descriptor_name":"Virulence Factors","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D065288","descriptor_name":"Serogroup","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D065288","descriptor_name":"Serogroup","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D065288","descriptor_name":"Serogroup","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066298","descriptor_name":"In Vitro Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066298","descriptor_name":"In Vitro Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066298","descriptor_name":"In Vitro Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1016/j.gpb.2014.11.001","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.gpb.2014.11.001","pdf_url":"https://www.sciencedirect.com/science/article/pii/S167202291400134X/pdf","source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25526982","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25526982","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, proteomics & bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:3385078","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4411499","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:c76929554d16457db4b883157f2a14d6","is_oa":false,"landing_page_url":"https://doaj.org/article/c76929554d16457db4b883157f2a14d6","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Genomics, Proteomics & Bioinformatics, Vol 12, Iss 6, Pp 266-275 (2014)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1016/j.gpb.2014.11.001","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.gpb.2014.11.001","pdf_url":"https://www.sciencedirect.com/science/article/pii/S167202291400134X/pdf","source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/14","score":0.6000000238418579,"display_name":"Life below water"}],"awards":[{"id":"https://openalex.org/G2808834595","display_name":null,"funder_award_id":"81201700","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321133","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35"},{"id":"https://openalex.org/F4320337189","display_name":"Institute of Microbiology, Chinese Academy of Sciences","ror":"https://ror.org/047yhep71"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1970243264.pdf","grobid_xml":"https://content.openalex.org/works/W1970243264.grobid-xml"},"referenced_works_count":52,"referenced_works":["https://openalex.org/W40830109","https://openalex.org/W1966246756","https://openalex.org/W1978668590","https://openalex.org/W1980705378","https://openalex.org/W1986287997","https://openalex.org/W1993516089","https://openalex.org/W2000964393","https://openalex.org/W2014780340","https://openalex.org/W2017275212","https://openalex.org/W2019887475","https://openalex.org/W2025234755","https://openalex.org/W2026350537","https://openalex.org/W2033343409","https://openalex.org/W2036449301","https://openalex.org/W2037230860","https://openalex.org/W2048863317","https://openalex.org/W2061024629","https://openalex.org/W2063594437","https://openalex.org/W2065973278","https://openalex.org/W2072430496","https://openalex.org/W2072967720","https://openalex.org/W2075205863","https://openalex.org/W2075624885","https://openalex.org/W2096068443","https://openalex.org/W2097517770","https://openalex.org/W2102504332","https://openalex.org/W2102619694","https://openalex.org/W2112884978","https://openalex.org/W2113320904","https://openalex.org/W2119034410","https://openalex.org/W2126793316","https://openalex.org/W2128715915","https://openalex.org/W2134412337","https://openalex.org/W2134526812","https://openalex.org/W2136145671","https://openalex.org/W2137464714","https://openalex.org/W2137586531","https://openalex.org/W2138486866","https://openalex.org/W2148406881","https://openalex.org/W2153515666","https://openalex.org/W2153992812","https://openalex.org/W2154431984","https://openalex.org/W2158183163","https://openalex.org/W2158217645","https://openalex.org/W2166374078","https://openalex.org/W2166706771","https://openalex.org/W2952535963","https://openalex.org/W4285719527","https://openalex.org/W4293196852","https://openalex.org/W6601689939","https://openalex.org/W6680267820","https://openalex.org/W6842402754"],"related_works":["https://openalex.org/W2082883801","https://openalex.org/W4253827695","https://openalex.org/W2794152573","https://openalex.org/W3173627137","https://openalex.org/W2104766178","https://openalex.org/W2377152916","https://openalex.org/W2373443668","https://openalex.org/W1682642237","https://openalex.org/W2383193530","https://openalex.org/W3081401689"],"abstract_inverted_index":{"The":[0,67],"Streptococcus":[1],"suis":[2,6,174],"serotype":[3],"2":[4,175],"(S.":[5],"2)":[7],"isolates":[8,34],"05ZYH33":[9],"and":[10,88,91,128,150],"98HAH33":[11],"have":[12],"caused":[13],"severe":[14],"human":[15],"infections":[16],"in":[17,27,75,83,125,134,168],"China.":[18],"Using":[19],"a":[20,38,54,114],"strand-specific":[21],"RNA-seq":[22],"analysis,":[23],"we":[24],"compared":[25],"the":[26,43,64,89,94,162,166,171],"vitro":[28],"transcriptomes":[29],"of":[30,37,61,93,101,111,130],"these":[31,51,76],"two":[32,77],"Chinese":[33,52,155],"with":[35,71,109],"that":[36,47,138,142],"reference":[39],"strain":[40],"(P1/7).":[41],"In":[42],"89K":[44],"genomic":[45],"island":[46],"is":[48],"specific":[49,153],"to":[50,145,154],"isolates,":[53],"toxin-antitoxin":[55],"system":[56],"showed":[57],"relatively":[58],"high":[59,72],"levels":[60],"transcription":[62],"among":[63,170],"S.":[65,173],"suis.":[66],"known":[68],"virulence":[69,169],"factors":[70,163],"transcriptional":[73],"activity":[74],"highly-pathogenic":[78],"strains":[79],"are":[80,132,143,152],"mainly":[81],"involved":[82,133],"adhesion,":[84],"biofilm":[85],"formation,":[86],"hemolysis":[87],"synthesis":[90],"transport":[92],"outer":[95],"membrane":[96],"protein.":[97,116],"Furthermore,":[98],"our":[99],"analysis":[100],"novel":[102],"transcripts":[103],"identified":[104],"over":[105,120],"50":[106],"protein-coding":[107],"genes":[108],"one":[110],"them":[112,131],"encoding":[113],"toxin":[115],"We":[117,136],"also":[118],"predicted":[119],"30":[121],"small":[122],"RNAs":[123],"(sRNAs)":[124],"each":[126],"strain,":[127],"most":[129],"riboswitches.":[135],"found":[137],"six":[139],"sRNA":[140],"candidates":[141],"related":[144],"bacterial":[146],"virulence,":[147],"including":[148],"cspA":[149],"rli38,":[151],"isolates.":[156,176],"These":[157],"results":[158],"provide":[159],"insight":[160],"into":[161],"responsible":[164],"for":[165],"difference":[167],"different":[172]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2016-06-24T00:00:00"}