{"id":"https://openalex.org/W7160428923","doi":"https://doi.org/10.1016/j.engappai.2026.114810","title":"Overcoming sparsity in micro ribonucleic acid\u2013messenger ribonucleic acid regulatory networks: A graph sample and aggregate framework with learnable virtual nodes","display_name":"Overcoming sparsity in micro ribonucleic acid\u2013messenger ribonucleic acid regulatory networks: A graph sample and aggregate framework with learnable virtual nodes","publication_year":2026,"publication_date":"2026-05-06","ids":{"openalex":"https://openalex.org/W7160428923","doi":"https://doi.org/10.1016/j.engappai.2026.114810"},"language":"en","primary_location":{"id":"doi:10.1016/j.engappai.2026.114810","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.engappai.2026.114810","pdf_url":null,"source":{"id":"https://openalex.org/S900972176","display_name":"Engineering Applications of Artificial Intelligence","issn_l":"0952-1976","issn":["0952-1976","1873-6769"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Engineering Applications of Artificial Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5121596663","display_name":"Zhiping Sun","orcid":null},"institutions":[{"id":"https://openalex.org/I145897649","display_name":"Minzu University of China","ror":"https://ror.org/0044e2g62","country_code":"CN","type":"education","lineage":["https://openalex.org/I145897649"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiping Sun","raw_affiliation_strings":["College of Electrical Engineering, Northwest Minzu University, Lanzhou, 730030, Gansu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Electrical Engineering, Northwest Minzu University, Lanzhou, 730030, Gansu, China","institution_ids":["https://openalex.org/I145897649"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100308514","display_name":"Guo Ling","orcid":"https://orcid.org/0000-0002-6574-4671"},"institutions":[{"id":"https://openalex.org/I4210108113","display_name":"Yango University","ror":"https://ror.org/01eqh1863","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210108113"]},{"id":"https://openalex.org/I78978612","display_name":"Yangzhou University","ror":"https://ror.org/03tqb8s11","country_code":"CN","type":"education","lineage":["https://openalex.org/I78978612"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ling Guo","raw_affiliation_strings":["School of Information and Artificial Intelligence, Yangzhou University, Yangzhou, 225009, Jiangsu, China"],"raw_orcid":"https://orcid.org/0000-0002-6574-4671","affiliations":[{"raw_affiliation_string":"School of Information and Artificial Intelligence, Yangzhou University, Yangzhou, 225009, Jiangsu, China","institution_ids":["https://openalex.org/I78978612","https://openalex.org/I4210108113"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5121575211","display_name":"Jia Mu","orcid":null},"institutions":[{"id":"https://openalex.org/I145897649","display_name":"Minzu University of China","ror":"https://ror.org/0044e2g62","country_code":"CN","type":"education","lineage":["https://openalex.org/I145897649"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jia Mu","raw_affiliation_strings":["School of Mathematics and Computer Science, Northwest Minzu University, Lanzhou, 730000, Gansu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics and Computer Science, Northwest Minzu University, Lanzhou, 730000, Gansu, China","institution_ids":["https://openalex.org/I145897649"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101617671","display_name":"Tao Qu","orcid":"https://orcid.org/0000-0001-8757-2615"},"institutions":[{"id":"https://openalex.org/I4210114785","display_name":"Gansu Provincial Hospital","ror":"https://ror.org/02axars19","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210114785"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Qu","raw_affiliation_strings":["Gansu Provincial Hospital, Lanzhou, 730099, Gansu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Gansu Provincial Hospital, Lanzhou, 730099, Gansu, China","institution_ids":["https://openalex.org/I4210114785"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5104243949","display_name":"Pan Y","orcid":null},"institutions":[{"id":"https://openalex.org/I141103825","display_name":"Jiangxi University of Water Resources and Electric Power","ror":"https://ror.org/00avfj807","country_code":"CN","type":"education","lineage":["https://openalex.org/I141103825"]},{"id":"https://openalex.org/I141649914","display_name":"Nanchang University","ror":"https://ror.org/042v6xz23","country_code":"CN","type":"education","lineage":["https://openalex.org/I141649914"]},{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yue Pan","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Medical Research Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, Guangdong, China","Nanchang Research Institute, Sun Yat-Sen University, Nanchang, 330096, Jiangxi, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Medical Research Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, Guangdong, China","institution_ids":["https://openalex.org/I4210097354","https://openalex.org/I157773358"]},{"raw_affiliation_string":"Nanchang Research Institute, Sun Yat-Sen University, Nanchang, 330096, Jiangxi, China","institution_ids":["https://openalex.org/I141649914","https://openalex.org/I141103825"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5100308514"],"corresponding_institution_ids":["https://openalex.org/I4210108113","https://openalex.org/I78978612"],"apc_list":{"value":3170,"currency":"USD","value_usd":3170},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.53896185,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"177","issue":null,"first_page":"114810","last_page":"114810"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.5843999981880188,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.5843999981880188,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.10119999945163727,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.06849999725818634,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.6955000162124634},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4634999930858612},{"id":"https://openalex.org/keywords/node","display_name":"Node (physics)","score":0.42669999599456787},{"id":"https://openalex.org/keywords/aggregate","display_name":"Aggregate (composite)","score":0.39160001277923584},{"id":"https://openalex.org/keywords/parametric-statistics","display_name":"Parametric statistics","score":0.37529999017715454},{"id":"https://openalex.org/keywords/margin","display_name":"Margin (machine learning)","score":0.35350000858306885},{"id":"https://openalex.org/keywords/directed-graph","display_name":"Directed graph","score":0.32499998807907104}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.857699990272522},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.6955000162124634},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4634999930858612},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4350000023841858},{"id":"https://openalex.org/C62611344","wikidata":"https://www.wikidata.org/wiki/Q1062658","display_name":"Node (physics)","level":2,"score":0.42669999599456787},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.397599995136261},{"id":"https://openalex.org/C4679612","wikidata":"https://www.wikidata.org/wiki/Q866298","display_name":"Aggregate (composite)","level":2,"score":0.39160001277923584},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3905999958515167},{"id":"https://openalex.org/C117251300","wikidata":"https://www.wikidata.org/wiki/Q1849855","display_name":"Parametric statistics","level":2,"score":0.37529999017715454},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37400001287460327},{"id":"https://openalex.org/C774472","wikidata":"https://www.wikidata.org/wiki/Q6760393","display_name":"Margin (machine learning)","level":2,"score":0.35350000858306885},{"id":"https://openalex.org/C146380142","wikidata":"https://www.wikidata.org/wiki/Q1137726","display_name":"Directed graph","level":2,"score":0.32499998807907104},{"id":"https://openalex.org/C174348530","wikidata":"https://www.wikidata.org/wiki/Q188635","display_name":"Bridging (networking)","level":2,"score":0.32409998774528503},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.32190001010894775},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.2996000051498413},{"id":"https://openalex.org/C64543145","wikidata":"https://www.wikidata.org/wiki/Q162942","display_name":"Intersection (aeronautics)","level":2,"score":0.2946999967098236},{"id":"https://openalex.org/C193415008","wikidata":"https://www.wikidata.org/wiki/Q639681","display_name":"Network architecture","level":2,"score":0.2809999883174896},{"id":"https://openalex.org/C198531522","wikidata":"https://www.wikidata.org/wiki/Q485146","display_name":"Sample (material)","level":2,"score":0.2736999988555908},{"id":"https://openalex.org/C97931131","wikidata":"https://www.wikidata.org/wiki/Q5282087","display_name":"Discriminative model","level":2,"score":0.27300000190734863},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.262800008058548}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1016/j.engappai.2026.114810","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.engappai.2026.114810","pdf_url":null,"source":{"id":"https://openalex.org/S900972176","display_name":"Engineering Applications of Artificial Intelligence","issn_l":"0952-1976","issn":["0952-1976","1873-6769"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Engineering Applications of Artificial Intelligence","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":67,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W1667789979","https://openalex.org/W1984667832","https://openalex.org/W2030083012","https://openalex.org/W2086361204","https://openalex.org/W2090335107","https://openalex.org/W2098318517","https://openalex.org/W2101314927","https://openalex.org/W2107018762","https://openalex.org/W2111112354","https://openalex.org/W2122211092","https://openalex.org/W2133571578","https://openalex.org/W2135836598","https://openalex.org/W2136943892","https://openalex.org/W2146512944","https://openalex.org/W2162097274","https://openalex.org/W2162674813","https://openalex.org/W2179438025","https://openalex.org/W2267017199","https://openalex.org/W2767680586","https://openalex.org/W2797145001","https://openalex.org/W2886514991","https://openalex.org/W2950896076","https://openalex.org/W2991094260","https://openalex.org/W3007701192","https://openalex.org/W3010881000","https://openalex.org/W3097300053","https://openalex.org/W3101369110","https://openalex.org/W3138330229","https://openalex.org/W3161753189","https://openalex.org/W3165629450","https://openalex.org/W3191787263","https://openalex.org/W3204934477","https://openalex.org/W4220788456","https://openalex.org/W4221068576","https://openalex.org/W4221072798","https://openalex.org/W4307178962","https://openalex.org/W4307502334","https://openalex.org/W4311823641","https://openalex.org/W4322732839","https://openalex.org/W4361017398","https://openalex.org/W4388593452","https://openalex.org/W4389159526","https://openalex.org/W4389202397","https://openalex.org/W4390005328","https://openalex.org/W4393870943","https://openalex.org/W4396721167","https://openalex.org/W4398255458","https://openalex.org/W4399141298","https://openalex.org/W4399571068","https://openalex.org/W4401672420","https://openalex.org/W4402030606","https://openalex.org/W4403785733","https://openalex.org/W4404623641","https://openalex.org/W4404656064","https://openalex.org/W4406093335","https://openalex.org/W4407356329","https://openalex.org/W4407673120","https://openalex.org/W4408327930","https://openalex.org/W4409593590","https://openalex.org/W4409816634","https://openalex.org/W4411300412","https://openalex.org/W4414802890","https://openalex.org/W4416940114","https://openalex.org/W4417451629","https://openalex.org/W7117866801","https://openalex.org/W7124763570"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-06-15T08:34:33.830935","created_date":"2026-05-07T00:00:00"}
