{"id":"https://openalex.org/W7161285834","doi":"https://doi.org/10.1016/j.compbiomed.2026.111756","title":"Semantic inductive graph-based diagnostics: A category-aware NLP-GCN framework for robust cancer detection via cfDNA end-motif and fragmentation analysis","display_name":"Semantic inductive graph-based diagnostics: A category-aware NLP-GCN framework for robust cancer detection via cfDNA end-motif and fragmentation analysis","publication_year":2026,"publication_date":"2026-05-16","ids":{"openalex":"https://openalex.org/W7161285834","doi":"https://doi.org/10.1016/j.compbiomed.2026.111756","pmid":"https://pubmed.ncbi.nlm.nih.gov/42143451"},"language":"en","primary_location":{"id":"doi:10.1016/j.compbiomed.2026.111756","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiomed.2026.111756","pdf_url":null,"source":{"id":"https://openalex.org/S44278595","display_name":"Computers in Biology and Medicine","issn_l":"0010-4825","issn":["0010-4825","1879-0534"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computers in Biology and Medicine","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5133822538","display_name":"mojtaba zolfi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210139126","display_name":"University of Science and Technology of Mazandaran","ror":"https://ror.org/04jf6jw55","country_code":"IR","type":"education","lineage":["https://openalex.org/I4210139126"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Mojtaba Zolfi","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of Science and Technology of Mazandaran, Behshahr, Iran"],"raw_orcid":"https://orcid.org/0009-0003-3784-6536","affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Science and Technology of Mazandaran, Behshahr, Iran","institution_ids":["https://openalex.org/I4210139126"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038007564","display_name":"Ali Ghanbari Sorkhi","orcid":"https://orcid.org/0000-0001-7064-5857"},"institutions":[{"id":"https://openalex.org/I4210139126","display_name":"University of Science and Technology of Mazandaran","ror":"https://ror.org/04jf6jw55","country_code":"IR","type":"education","lineage":["https://openalex.org/I4210139126"]}],"countries":["IR"],"is_corresponding":true,"raw_author_name":"Ali Ghanbari Sorkhi","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of Science and Technology of Mazandaran, Behshahr, Iran. Electronic address: ali.ghanbari@mazust.ac.ir"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Science and Technology of Mazandaran, Behshahr, Iran. Electronic address: ali.ghanbari@mazust.ac.ir","institution_ids":["https://openalex.org/I4210139126"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5036749459","display_name":"Jamshid Pirgazi","orcid":"https://orcid.org/0000-0002-2461-1143"},"institutions":[{"id":"https://openalex.org/I4210139126","display_name":"University of Science and Technology of Mazandaran","ror":"https://ror.org/04jf6jw55","country_code":"IR","type":"education","lineage":["https://openalex.org/I4210139126"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Jamshid Pirgazi","raw_affiliation_strings":["Department of Electrical and Computer Engineering, University of Science and Technology of Mazandaran, Behshahr, Iran"],"raw_orcid":"https://orcid.org/0000-0002-2461-1143","affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Science and Technology of Mazandaran, Behshahr, Iran","institution_ids":["https://openalex.org/I4210139126"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5038007564"],"corresponding_institution_ids":["https://openalex.org/I4210139126"],"apc_list":{"value":2610,"currency":"USD","value_usd":2610},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.63279066,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"211","issue":null,"first_page":"111756","last_page":"111756"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.3944999873638153,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.3944999873638153,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.13359999656677246,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.0763000026345253,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cancer-detection","display_name":"Cancer detection","score":0.5849000215530396},{"id":"https://openalex.org/keywords/fragmentation","display_name":"Fragmentation (computing)","score":0.5504000186920166},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4242999851703644},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.3379000127315521}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.635699987411499},{"id":"https://openalex.org/C2985322473","wikidata":"https://www.wikidata.org/wiki/Q3044843","display_name":"Cancer detection","level":3,"score":0.5849000215530396},{"id":"https://openalex.org/C191015642","wikidata":"https://www.wikidata.org/wiki/Q1132459","display_name":"Fragmentation (computing)","level":2,"score":0.5504000186920166},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5304999947547913},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4242999851703644},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.3379000127315521},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3375000059604645},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2957000136375427},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.29440000653266907},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.2847000062465668}],"mesh":[{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000073888","descriptor_name":"Cell-Free Nucleic Acids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000074141","descriptor_name":"Circulating Tumor DNA","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D000074141","descriptor_name":"Circulating Tumor DNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000098417","descriptor_name":"Long Short Term Memory","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098422","descriptor_name":"Graph Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008113","descriptor_name":"Liver Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D008113","descriptor_name":"Liver Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000097","qualifier_name":"blood","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.compbiomed.2026.111756","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiomed.2026.111756","pdf_url":null,"source":{"id":"https://openalex.org/S44278595","display_name":"Computers in Biology and Medicine","issn_l":"0010-4825","issn":["0010-4825","1879-0534"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computers in Biology and Medicine","raw_type":"journal-article"},{"id":"pmid:42143451","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42143451","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computers in biology and medicine","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W2593435710","https://openalex.org/W2897036123","https://openalex.org/W2947989913","https://openalex.org/W3009023731","https://openalex.org/W3129276713","https://openalex.org/W4220903131","https://openalex.org/W4223575138","https://openalex.org/W4295242484","https://openalex.org/W4313650905","https://openalex.org/W4315786466","https://openalex.org/W4366351594","https://openalex.org/W4376891107","https://openalex.org/W4382631122","https://openalex.org/W4389937650","https://openalex.org/W4392628336","https://openalex.org/W4401049817","https://openalex.org/W4402118785","https://openalex.org/W4406678260","https://openalex.org/W4408884746","https://openalex.org/W4409487717","https://openalex.org/W4410006317","https://openalex.org/W4410618625","https://openalex.org/W4411765463","https://openalex.org/W4414803283"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-06-29T08:53:18.405633","created_date":"2026-05-16T00:00:00"}
