{"id":"https://openalex.org/W7163174941","doi":"https://doi.org/10.1016/j.compbiolchem.2026.109145","title":"Integrating transcriptomics and gene-level interpretable probabilistic Tsetlin Machine reveals elevated pancreatic cancer risk in Type 2 diabetes","display_name":"Integrating transcriptomics and gene-level interpretable probabilistic Tsetlin Machine reveals elevated pancreatic cancer risk in Type 2 diabetes","publication_year":2026,"publication_date":"2026-06-02","ids":{"openalex":"https://openalex.org/W7163174941","doi":"https://doi.org/10.1016/j.compbiolchem.2026.109145","pmid":"https://pubmed.ncbi.nlm.nih.gov/42275752"},"language":"en","primary_location":{"id":"doi:10.1016/j.compbiolchem.2026.109145","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiolchem.2026.109145","pdf_url":null,"source":{"id":"https://openalex.org/S104924063","display_name":"Computational Biology and Chemistry","issn_l":"1476-9271","issn":["1476-9271","1476-928X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology and Chemistry","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5135295540","display_name":"Subhradyuti Basu","orcid":null},"institutions":[{"id":"https://openalex.org/I16292982","display_name":"National Institute of Technology Rourkela","ror":"https://ror.org/011gmn932","country_code":"IN","type":"education","lineage":["https://openalex.org/I16292982"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Subhradyuti Basu","raw_affiliation_strings":["Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela, 769008, Odisha, India"],"raw_orcid":"https://orcid.org/0009-0004-7066-4547","affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela, 769008, Odisha, India","institution_ids":["https://openalex.org/I16292982"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5137627283","display_name":"Abhipsa Dash","orcid":"https://orcid.org/0009-0003-7655-0877"},"institutions":[{"id":"https://openalex.org/I16292982","display_name":"National Institute of Technology Rourkela","ror":"https://ror.org/011gmn932","country_code":"IN","type":"education","lineage":["https://openalex.org/I16292982"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Abhipsa Dash","raw_affiliation_strings":["Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela, 769008, Odisha, India"],"raw_orcid":"https://orcid.org/0009-0003-7655-0877","affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela, 769008, Odisha, India","institution_ids":["https://openalex.org/I16292982"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012474009","display_name":"Deepjyoti Kalita","orcid":"https://orcid.org/0000-0001-8273-7425"},"institutions":[{"id":"https://openalex.org/I16292982","display_name":"National Institute of Technology Rourkela","ror":"https://ror.org/011gmn932","country_code":"IN","type":"education","lineage":["https://openalex.org/I16292982"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Deepjyoti Kalita","raw_affiliation_strings":["Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela, 769008, Odisha, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela, 769008, Odisha, India","institution_ids":["https://openalex.org/I16292982"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089237587","display_name":"Amrita Singh","orcid":"https://orcid.org/0000-0003-1890-7527"},"institutions":[{"id":"https://openalex.org/I16292982","display_name":"National Institute of Technology Rourkela","ror":"https://ror.org/011gmn932","country_code":"IN","type":"education","lineage":["https://openalex.org/I16292982"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Amrita Singh","raw_affiliation_strings":["Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela, 769008, Odisha, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela, 769008, Odisha, India","institution_ids":["https://openalex.org/I16292982"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035891124","display_name":"C. Toumazou","orcid":"https://orcid.org/0000-0001-8773-7360"},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Christofer Toumazou","raw_affiliation_strings":["Centre for Bioinspired Technology, Imperial College London, London, SW7 2AZ, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Bioinspired Technology, Imperial College London, London, SW7 2AZ, United Kingdom","institution_ids":["https://openalex.org/I47508984"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018680323","display_name":"Khalid B. Mirza","orcid":"https://orcid.org/0000-0001-8754-6468"},"institutions":[{"id":"https://openalex.org/I16292982","display_name":"National Institute of Technology Rourkela","ror":"https://ror.org/011gmn932","country_code":"IN","type":"education","lineage":["https://openalex.org/I16292982"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Khalid Baig Mirza","raw_affiliation_strings":["Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela, 769008, Odisha, India. Electronic address: baigm@nitrkl.ac.in"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela, 769008, Odisha, India. Electronic address: baigm@nitrkl.ac.in","institution_ids":["https://openalex.org/I16292982"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5018680323"],"corresponding_institution_ids":["https://openalex.org/I16292982"],"apc_list":{"value":3320,"currency":"USD","value_usd":3320},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.47173065,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"124","issue":"Pt 2","first_page":"109145","last_page":"109145"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11339","display_name":"Metabolism, Diabetes, and Cancer","score":0.554099977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11339","display_name":"Metabolism, Diabetes, and Cancer","score":0.554099977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10231","display_name":"Pancreatic and Hepatic Oncology Research","score":0.07109999656677246,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.04569999873638153,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pancreatic-cancer","display_name":"Pancreatic cancer","score":0.6766999959945679},{"id":"https://openalex.org/keywords/type-2-diabetes","display_name":"Type 2 diabetes","score":0.6086000204086304},{"id":"https://openalex.org/keywords/crosstalk","display_name":"Crosstalk","score":0.5515000224113464},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.5447999835014343},{"id":"https://openalex.org/keywords/risk-stratification","display_name":"Risk stratification","score":0.49410000443458557},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.484499990940094}],"concepts":[{"id":"https://openalex.org/C2780210213","wikidata":"https://www.wikidata.org/wiki/Q212961","display_name":"Pancreatic cancer","level":3,"score":0.6766999959945679},{"id":"https://openalex.org/C2777180221","wikidata":"https://www.wikidata.org/wiki/Q3025883","display_name":"Type 2 diabetes","level":3,"score":0.6086000204086304},{"id":"https://openalex.org/C169822122","wikidata":"https://www.wikidata.org/wiki/Q230187","display_name":"Crosstalk","level":2,"score":0.5515000224113464},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.5447999835014343},{"id":"https://openalex.org/C3020404979","wikidata":"https://www.wikidata.org/wiki/Q1058438","display_name":"Risk stratification","level":2,"score":0.49410000443458557},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.484499990940094},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4779999852180481},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4675000011920929},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4659000039100647},{"id":"https://openalex.org/C555293320","wikidata":"https://www.wikidata.org/wiki/Q12206","display_name":"Diabetes mellitus","level":2,"score":0.44519999623298645},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4036000072956085},{"id":"https://openalex.org/C46699223","wikidata":"https://www.wikidata.org/wiki/Q11078","display_name":"Endocrine system","level":3,"score":0.3880000114440918},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.3878999948501587},{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.3822000026702881},{"id":"https://openalex.org/C12174686","wikidata":"https://www.wikidata.org/wiki/Q1058438","display_name":"Risk assessment","level":2,"score":0.35850000381469727},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.35370001196861267},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.32589998841285706},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.30970001220703125},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2913999855518341},{"id":"https://openalex.org/C50440223","wikidata":"https://www.wikidata.org/wiki/Q1475848","display_name":"Risk factor","level":2,"score":0.27630001306533813},{"id":"https://openalex.org/C96250715","wikidata":"https://www.wikidata.org/wiki/Q965330","display_name":"Estimation","level":2,"score":0.2750999927520752},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25119999051094055}],"mesh":[{"descriptor_ui":"D003924","descriptor_name":"Diabetes Mellitus, Type 2","qualifier_ui":"Q000150","qualifier_name":"complications","is_major_topic":true},{"descriptor_ui":"D003924","descriptor_name":"Diabetes Mellitus, Type 2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010190","descriptor_name":"Pancreatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012307","descriptor_name":"Risk Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.compbiolchem.2026.109145","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiolchem.2026.109145","pdf_url":null,"source":{"id":"https://openalex.org/S104924063","display_name":"Computational Biology and Chemistry","issn_l":"1476-9271","issn":["1476-9271","1476-928X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology and Chemistry","raw_type":"journal-article"},{"id":"pmid:42275752","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42275752","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational biology and chemistry","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5754974484443665,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G5144001076","display_name":null,"funder_award_id":"IIRP/23-24/7414","funder_id":"https://openalex.org/F4320320720","funder_display_name":"Indian Council of Medical Research"}],"funders":[{"id":"https://openalex.org/F4320306227","display_name":"Arthritis National Research Foundation","ror":"https://ror.org/03abbex33"},{"id":"https://openalex.org/F4320320720","display_name":"Indian Council of Medical Research","ror":"https://ror.org/0492wrx28"},{"id":"https://openalex.org/F4320320736","display_name":"All India Council for Technical Education","ror":"https://ror.org/00xcd7y72"},{"id":"https://openalex.org/F4320325377","display_name":"National Institute of Technology Rourkela","ror":"https://ror.org/011gmn932"},{"id":"https://openalex.org/F7554583698","display_name":"Institut Teknologi Nasional - Bandung","ror":"https://ror.org/01w3rm550"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W1966254895","https://openalex.org/W2053740346","https://openalex.org/W2064641822","https://openalex.org/W2095403671","https://openalex.org/W2103912979","https://openalex.org/W2110569100","https://openalex.org/W2139168999","https://openalex.org/W2151975241","https://openalex.org/W2153646897","https://openalex.org/W2159675211","https://openalex.org/W2179438025","https://openalex.org/W2401459239","https://openalex.org/W2564768321","https://openalex.org/W3016561671","https://openalex.org/W3034029254","https://openalex.org/W3170503528","https://openalex.org/W3175623102","https://openalex.org/W4213161509","https://openalex.org/W4225664734","https://openalex.org/W4375858857","https://openalex.org/W4389004714","https://openalex.org/W4389951813","https://openalex.org/W4391116948","https://openalex.org/W4391759643","https://openalex.org/W4400485611","https://openalex.org/W4406234938","https://openalex.org/W4409145360","https://openalex.org/W4412404513"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-08-29T07:29:34.045763","created_date":"2026-06-03T00:00:00"}
