{"id":"https://openalex.org/W7162332523","doi":"https://doi.org/10.1016/j.compbiolchem.2026.109138","title":"Multi-omics and machine learning uncover the MX1-ISG15-STAT1 synergistic axis as the core interferon signature in systemic lupus erythematosus and identify herbal-derived multi-target therapeutic candidates","display_name":"Multi-omics and machine learning uncover the MX1-ISG15-STAT1 synergistic axis as the core interferon signature in systemic lupus erythematosus and identify herbal-derived multi-target therapeutic candidates","publication_year":2026,"publication_date":"2026-05-25","ids":{"openalex":"https://openalex.org/W7162332523","doi":"https://doi.org/10.1016/j.compbiolchem.2026.109138","pmid":"https://pubmed.ncbi.nlm.nih.gov/42241839"},"language":"en","primary_location":{"id":"doi:10.1016/j.compbiolchem.2026.109138","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiolchem.2026.109138","pdf_url":null,"source":{"id":"https://openalex.org/S104924063","display_name":"Computational Biology and Chemistry","issn_l":"1476-9271","issn":["1476-9271","1476-928X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology and Chemistry","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5136897424","display_name":"Junjie Cao","orcid":null},"institutions":[{"id":"https://openalex.org/I105086349","display_name":"North Sichuan Medical University","ror":"https://ror.org/05k3sdc46","country_code":"CN","type":"education","lineage":["https://openalex.org/I105086349"]},{"id":"https://openalex.org/I4210108565","display_name":"Affiliated Hospital of North Sichuan Medical College","ror":"https://ror.org/01673gn35","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210108565"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junjie Cao","raw_affiliation_strings":["Department of Emergency, Affiliated Hospital of North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China; School of Clinical Medicine, North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China. Electronic address: caojunjie@nsmc.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Emergency, Affiliated Hospital of North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China; School of Clinical Medicine, North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China. Electronic address: caojunjie@nsmc.edu.cn","institution_ids":["https://openalex.org/I105086349","https://openalex.org/I4210108565"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5136925564","display_name":"Yanru Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I105086349","display_name":"North Sichuan Medical University","ror":"https://ror.org/05k3sdc46","country_code":"CN","type":"education","lineage":["https://openalex.org/I105086349"]},{"id":"https://openalex.org/I4210108565","display_name":"Affiliated Hospital of North Sichuan Medical College","ror":"https://ror.org/01673gn35","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210108565"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanru Chen","raw_affiliation_strings":["Department of Emergency, Affiliated Hospital of North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China; School of Clinical Medicine, North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China. Electronic address: 18982784300@163.com"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Emergency, Affiliated Hospital of North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China; School of Clinical Medicine, North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China. Electronic address: 18982784300@163.com","institution_ids":["https://openalex.org/I105086349","https://openalex.org/I4210108565"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046904841","display_name":"Rong Hang","orcid":null},"institutions":[{"id":"https://openalex.org/I105086349","display_name":"North Sichuan Medical University","ror":"https://ror.org/05k3sdc46","country_code":"CN","type":"education","lineage":["https://openalex.org/I105086349"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rong Huang","raw_affiliation_strings":["School of Clinical Medicine, North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China. Electronic address: huangrong1515@163.com"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Clinical Medicine, North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China. Electronic address: huangrong1515@163.com","institution_ids":["https://openalex.org/I105086349"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5136946002","display_name":"Lin Ma","orcid":null},"institutions":[{"id":"https://openalex.org/I105086349","display_name":"North Sichuan Medical University","ror":"https://ror.org/05k3sdc46","country_code":"CN","type":"education","lineage":["https://openalex.org/I105086349"]},{"id":"https://openalex.org/I4210108565","display_name":"Affiliated Hospital of North Sichuan Medical College","ror":"https://ror.org/01673gn35","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210108565"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lin Ma","raw_affiliation_strings":["Department of Emergency, Affiliated Hospital of North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China; School of Clinical Medicine, North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China. Electronic address: malin@nsmc.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Emergency, Affiliated Hospital of North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China; School of Clinical Medicine, North Sichuan Medical College, Nanchong, Sichuan Province, 637000, China. Electronic address: malin@nsmc.edu.cn","institution_ids":["https://openalex.org/I105086349","https://openalex.org/I4210108565"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5136946002"],"corresponding_institution_ids":["https://openalex.org/I105086349","https://openalex.org/I4210108565"],"apc_list":{"value":2960,"currency":"USD","value_usd":2960},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.60382802,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"124","issue":"Pt 1","first_page":"109138","last_page":"109138"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11503","display_name":"Cytokine Signaling Pathways and Interactions","score":0.5554999709129333,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11503","display_name":"Cytokine Signaling Pathways and Interactions","score":0.5554999709129333,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11668","display_name":"interferon and immune responses","score":0.30410000681877136,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11533","display_name":"Melanoma and MAPK Pathways","score":0.010499999858438969,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/core","display_name":"Core (optical fiber)","score":0.6237999796867371},{"id":"https://openalex.org/keywords/signature","display_name":"Signature (topology)","score":0.5902000069618225},{"id":"https://openalex.org/keywords/interferon","display_name":"Interferon","score":0.42080000042915344},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.29440000653266907},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.2937000095844269}],"concepts":[{"id":"https://openalex.org/C2164484","wikidata":"https://www.wikidata.org/wiki/Q5170150","display_name":"Core (optical fiber)","level":2,"score":0.6237999796867371},{"id":"https://openalex.org/C2779696439","wikidata":"https://www.wikidata.org/wiki/Q7512811","display_name":"Signature (topology)","level":2,"score":0.5902000069618225},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.534500002861023},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5253999829292297},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5080999732017517},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4697999954223633},{"id":"https://openalex.org/C2776178377","wikidata":"https://www.wikidata.org/wiki/Q188269","display_name":"Interferon","level":2,"score":0.42080000042915344},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3343000113964081},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.31150001287460327},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.29440000653266907},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.2937000095844269},{"id":"https://openalex.org/C51632099","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Training set","level":2,"score":0.2937000095844269},{"id":"https://openalex.org/C2909179924","wikidata":"https://www.wikidata.org/wiki/Q6046488","display_name":"Alpha interferon","level":3,"score":0.28600001335144043},{"id":"https://openalex.org/C2994247566","wikidata":"https://www.wikidata.org/wiki/Q2450337","display_name":"Interferon beta","level":3,"score":0.25519999861717224},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2531999945640564}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007372","descriptor_name":"Interferons","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D007372","descriptor_name":"Interferons","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D008180","descriptor_name":"Lupus Erythematosus, Systemic","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D008180","descriptor_name":"Lupus Erythematosus, Systemic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008180","descriptor_name":"Lupus Erythematosus, Systemic","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014452","descriptor_name":"Ubiquitins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014452","descriptor_name":"Ubiquitins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D016207","descriptor_name":"Cytokines","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016207","descriptor_name":"Cytokines","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D050794","descriptor_name":"STAT1 Transcription Factor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D050794","descriptor_name":"STAT1 Transcription Factor","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064547","descriptor_name":"Myxovirus Resistance Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D064547","descriptor_name":"Myxovirus Resistance Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.compbiolchem.2026.109138","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiolchem.2026.109138","pdf_url":null,"source":{"id":"https://openalex.org/S104924063","display_name":"Computational Biology and Chemistry","issn_l":"1476-9271","issn":["1476-9271","1476-928X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology and Chemistry","raw_type":"journal-article"},{"id":"pmid:42241839","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42241839","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational biology and chemistry","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6194483041763306,"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1990114715","https://openalex.org/W2581245204","https://openalex.org/W2948214599","https://openalex.org/W2948488594","https://openalex.org/W3002111288","https://openalex.org/W3015438624","https://openalex.org/W3130305184","https://openalex.org/W3189265697","https://openalex.org/W4205221773","https://openalex.org/W4385737512","https://openalex.org/W4391990146","https://openalex.org/W4394567601","https://openalex.org/W4396904667","https://openalex.org/W4399070786","https://openalex.org/W4404447945","https://openalex.org/W4412493440","https://openalex.org/W4412540398","https://openalex.org/W4412856383","https://openalex.org/W4414487237","https://openalex.org/W4416138290"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-06-15T08:34:33.830935","created_date":"2026-05-26T00:00:00"}
