{"id":"https://openalex.org/W4416713001","doi":"https://doi.org/10.1016/j.compbiolchem.2025.108801","title":"Functional profiling of the chaperone systems interactome in breast cancer using experimental and machine-learning data","display_name":"Functional profiling of the chaperone systems interactome in breast cancer using experimental and machine-learning data","publication_year":2025,"publication_date":"2025-11-24","ids":{"openalex":"https://openalex.org/W4416713001","doi":"https://doi.org/10.1016/j.compbiolchem.2025.108801","pmid":"https://pubmed.ncbi.nlm.nih.gov/41308292"},"language":"en","primary_location":{"id":"doi:10.1016/j.compbiolchem.2025.108801","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiolchem.2025.108801","pdf_url":null,"source":{"id":"https://openalex.org/S104924063","display_name":"Computational Biology and Chemistry","issn_l":"1476-9271","issn":["1476-9271","1476-928X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology and Chemistry","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017906760","display_name":"Alexandre Luiz Korte de Azevedo","orcid":"https://orcid.org/0000-0001-8934-7630"},"institutions":[{"id":"https://openalex.org/I52418104","display_name":"Universidade Federal do Paran\u00e1","ror":"https://ror.org/05syd6y78","country_code":"BR","type":"education","lineage":["https://openalex.org/I52418104"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Alexandre Luiz Korte de Azevedo","raw_affiliation_strings":["Genetics Post-Graduation Program, Genetics Department, Federal University of Parana, Curitiba, Parana, Brazil"],"raw_orcid":"https://orcid.org/0000-0001-8934-7630","affiliations":[{"raw_affiliation_string":"Genetics Post-Graduation Program, Genetics Department, Federal University of Parana, Curitiba, Parana, Brazil","institution_ids":["https://openalex.org/I52418104"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033037720","display_name":"J. M. Dias Pereira","orcid":"https://orcid.org/0000-0002-0183-132X"},"institutions":[{"id":"https://openalex.org/I52418104","display_name":"Universidade Federal do Paran\u00e1","ror":"https://ror.org/05syd6y78","country_code":"BR","type":"education","lineage":["https://openalex.org/I52418104"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Mateus Vinicius Oliveira Pereira","raw_affiliation_strings":["Genetics Post-Graduation Program, Genetics Department, Federal University of Parana, Curitiba, Parana, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genetics Post-Graduation Program, Genetics Department, Federal University of Parana, Curitiba, Parana, Brazil","institution_ids":["https://openalex.org/I52418104"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001655428","display_name":"Enilze Maria de Souza Fonseca Ribeiro","orcid":"https://orcid.org/0000-0002-2194-4727"},"institutions":[{"id":"https://openalex.org/I52418104","display_name":"Universidade Federal do Paran\u00e1","ror":"https://ror.org/05syd6y78","country_code":"BR","type":"education","lineage":["https://openalex.org/I52418104"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Enilze Maria de Souza Fonseca Ribeiro","raw_affiliation_strings":["Genetics Post-Graduation Program, Genetics Department, Federal University of Parana, Curitiba, Parana, Brazil. Electronic address: eribeiro@ufpr.br"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genetics Post-Graduation Program, Genetics Department, Federal University of Parana, Curitiba, Parana, Brazil. Electronic address: eribeiro@ufpr.br","institution_ids":["https://openalex.org/I52418104"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081123033","display_name":"Talita Helen Bombardelli Gomig","orcid":null},"institutions":[{"id":"https://openalex.org/I52418104","display_name":"Universidade Federal do Paran\u00e1","ror":"https://ror.org/05syd6y78","country_code":"BR","type":"education","lineage":["https://openalex.org/I52418104"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Talita Helen Bombardelli Gomig","raw_affiliation_strings":["Genetics Post-Graduation Program, Genetics Department, Federal University of Parana, Curitiba, Parana, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genetics Post-Graduation Program, Genetics Department, Federal University of Parana, Curitiba, Parana, Brazil","institution_ids":["https://openalex.org/I52418104"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5001655428"],"corresponding_institution_ids":["https://openalex.org/I52418104"],"apc_list":{"value":2960,"currency":"USD","value_usd":2960},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.29897538,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"121","issue":null,"first_page":"108801","last_page":"108801"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10934","display_name":"Heat shock proteins research","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10934","display_name":"Heat shock proteins research","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14364","display_name":"Clusterin in disease pathology","score":0.0008999999845400453,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.8281000256538391},{"id":"https://openalex.org/keywords/chaperone","display_name":"Chaperone (clinical)","score":0.7685999870300293},{"id":"https://openalex.org/keywords/proteostasis","display_name":"Proteostasis","score":0.5831999778747559},{"id":"https://openalex.org/keywords/hsp90","display_name":"Hsp90","score":0.501800000667572},{"id":"https://openalex.org/keywords/carcinogenesis","display_name":"Carcinogenesis","score":0.4415000081062317},{"id":"https://openalex.org/keywords/hsp70","display_name":"Hsp70","score":0.438400000333786},{"id":"https://openalex.org/keywords/heat-shock-protein","display_name":"Heat shock protein","score":0.413100004196167},{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.40709999203681946}],"concepts":[{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.8281000256538391},{"id":"https://openalex.org/C2775962898","wikidata":"https://www.wikidata.org/wiki/Q5073152","display_name":"Chaperone (clinical)","level":2,"score":0.7685999870300293},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6996999979019165},{"id":"https://openalex.org/C2781452922","wikidata":"https://www.wikidata.org/wiki/Q2892805","display_name":"Proteostasis","level":2,"score":0.5831999778747559},{"id":"https://openalex.org/C2775932338","wikidata":"https://www.wikidata.org/wiki/Q24772687","display_name":"Hsp90","level":4,"score":0.501800000667572},{"id":"https://openalex.org/C555283112","wikidata":"https://www.wikidata.org/wiki/Q1637543","display_name":"Carcinogenesis","level":3,"score":0.4415000081062317},{"id":"https://openalex.org/C68991219","wikidata":"https://www.wikidata.org/wiki/Q419102","display_name":"Hsp70","level":4,"score":0.438400000333786},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4318000078201294},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.42879998683929443},{"id":"https://openalex.org/C205260736","wikidata":"https://www.wikidata.org/wiki/Q418939","display_name":"Heat shock protein","level":3,"score":0.413100004196167},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.40709999203681946},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.3840999901294708},{"id":"https://openalex.org/C85755625","wikidata":"https://www.wikidata.org/wiki/Q24771589","display_name":"Chaperonin","level":3,"score":0.33399999141693115},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3206000030040741},{"id":"https://openalex.org/C62478195","wikidata":"https://www.wikidata.org/wiki/Q828130","display_name":"Signal transduction","level":2,"score":0.30979999899864197},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.2935999929904938},{"id":"https://openalex.org/C141109615","wikidata":"https://www.wikidata.org/wiki/Q5137430","display_name":"Co-chaperone","level":5,"score":0.2883000075817108},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2865000069141388},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.2863999903202057},{"id":"https://openalex.org/C171897839","wikidata":"https://www.wikidata.org/wiki/Q417841","display_name":"Protein family","level":3,"score":0.28360000252723694},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.2750000059604645},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.2745000123977661},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.27410000562667847}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018832","descriptor_name":"Molecular Chaperones","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D018832","descriptor_name":"Molecular Chaperones","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.compbiolchem.2025.108801","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.compbiolchem.2025.108801","pdf_url":null,"source":{"id":"https://openalex.org/S104924063","display_name":"Computational Biology and Chemistry","issn_l":"1476-9271","issn":["1476-9271","1476-928X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology and Chemistry","raw_type":"journal-article"},{"id":"pmid:41308292","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41308292","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational biology and chemistry","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1058030846","display_name":null,"funder_award_id":"408502/2023","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"}],"funders":[{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":87,"referenced_works":["https://openalex.org/W1963761369","https://openalex.org/W1967439927","https://openalex.org/W1995486038","https://openalex.org/W2000383223","https://openalex.org/W2004923706","https://openalex.org/W2010457001","https://openalex.org/W2025807667","https://openalex.org/W2033289207","https://openalex.org/W2051483559","https://openalex.org/W2051839343","https://openalex.org/W2055393058","https://openalex.org/W2058865073","https://openalex.org/W2060902443","https://openalex.org/W2062101352","https://openalex.org/W2068122866","https://openalex.org/W2080752012","https://openalex.org/W2086346948","https://openalex.org/W2109936231","https://openalex.org/W2116408740","https://openalex.org/W2126307554","https://openalex.org/W2138586777","https://openalex.org/W2145469049","https://openalex.org/W2159675211","https://openalex.org/W2171130486","https://openalex.org/W2171249995","https://openalex.org/W2274487043","https://openalex.org/W2294631847","https://openalex.org/W2295131019","https://openalex.org/W2463195069","https://openalex.org/W2513071915","https://openalex.org/W2523948074","https://openalex.org/W2570296944","https://openalex.org/W2572080171","https://openalex.org/W2616974521","https://openalex.org/W2763622914","https://openalex.org/W2793344750","https://openalex.org/W2796949439","https://openalex.org/W2889502232","https://openalex.org/W2918524510","https://openalex.org/W2930373933","https://openalex.org/W2944868387","https://openalex.org/W2946213115","https://openalex.org/W2954926994","https://openalex.org/W3003413939","https://openalex.org/W3011208784","https://openalex.org/W3011958616","https://openalex.org/W3034638165","https://openalex.org/W3041946132","https://openalex.org/W3043260135","https://openalex.org/W3094146848","https://openalex.org/W3096239350","https://openalex.org/W3112015570","https://openalex.org/W3135106548","https://openalex.org/W3170232518","https://openalex.org/W3177828909","https://openalex.org/W3200057737","https://openalex.org/W3213025322","https://openalex.org/W4200479181","https://openalex.org/W4200598043","https://openalex.org/W4206025638","https://openalex.org/W4213065914","https://openalex.org/W4213096603","https://openalex.org/W4213174134","https://openalex.org/W4214831981","https://openalex.org/W4214925923","https://openalex.org/W4224325556","https://openalex.org/W4285595787","https://openalex.org/W4289861430","https://openalex.org/W4292089263","https://openalex.org/W4292694402","https://openalex.org/W4308062012","https://openalex.org/W4317821615","https://openalex.org/W4324027519","https://openalex.org/W4366991107","https://openalex.org/W4376872594","https://openalex.org/W4379769521","https://openalex.org/W4385521105","https://openalex.org/W4387402700","https://openalex.org/W4387739932","https://openalex.org/W4390904338","https://openalex.org/W4391880964","https://openalex.org/W4392159456","https://openalex.org/W4399117838","https://openalex.org/W4403010869","https://openalex.org/W4404046121","https://openalex.org/W4406538142","https://openalex.org/W4409529031"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-05-16T08:24:45.110214","created_date":"2025-11-25T00:00:00"}
