{"id":"https://openalex.org/W4388806396","doi":"https://doi.org/10.1016/j.biosystems.2023.105087","title":"Synthetic model ecosystem of 12 cryopreservable microbial species allowing for a noninvasive approach","display_name":"Synthetic model ecosystem of 12 cryopreservable microbial species allowing for a noninvasive approach","publication_year":2023,"publication_date":"2023-11-19","ids":{"openalex":"https://openalex.org/W4388806396","doi":"https://doi.org/10.1016/j.biosystems.2023.105087","pmid":"https://pubmed.ncbi.nlm.nih.gov/37989470"},"language":"en","primary_location":{"id":"doi:10.1016/j.biosystems.2023.105087","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.biosystems.2023.105087","pdf_url":null,"source":{"id":"https://openalex.org/S99347777","display_name":"Biosystems","issn_l":"0303-2647","issn":["0303-2647","1872-8324"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioSystems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103164879","display_name":"Kazufumi Hosoda","orcid":"https://orcid.org/0000-0002-8043-0216"},"institutions":[{"id":"https://openalex.org/I4210116810","display_name":"RIKEN Center for Biosystems Dynamics Research","ror":"https://ror.org/023rffy11","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210116810"]},{"id":"https://openalex.org/I65837984","display_name":"Kobe University","ror":"https://ror.org/03tgsfw79","country_code":"JP","type":"education","lineage":["https://openalex.org/I65837984"]},{"id":"https://openalex.org/I90023481","display_name":"National Institute of Information and Communications Technology","ror":"https://ror.org/016bgq349","country_code":"JP","type":"facility","lineage":["https://openalex.org/I90023481"]},{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Kazufumi Hosoda","raw_affiliation_strings":["RIKEN Center for Biosystems Dynamics Research, 6-2-3 Furuedai, Suita, Osaka, 565-0874, Japan; Center for Information and Neural Networks (CiNet), National Institute of Information and Communications Technology (NICT), Osaka, Japan; Institute for Transdisciplinary Graduate Degree Programs, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, Japan; Life and Medical Sciences Area, Health Sciences Discipline, Kobe University, Tomogaoka 7-10-2, Suma-ku, Kobe, Hyogo, 654-0142, Japan. Electronic address: hosodak@nict.go.jp","Institute for Transdisciplinary Graduate Degree Programs, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, Japan","RIKEN Center for Biosystems Dynamics Research, 6-2-3 Furuedai, Suita, Osaka, 565-0874, Japan","Life and Medical Sciences Area, Health Sciences Discipline, Kobe University, Tomogaoka 7-10-2, Suma-ku, Kobe, Hyogo, 654-0142, Japan","Center for Information and Neural Networks (CiNet), National Institute of Information and Communications Technology (NICT), Osaka, Japan"],"affiliations":[{"raw_affiliation_string":"RIKEN Center for Biosystems Dynamics Research, 6-2-3 Furuedai, Suita, Osaka, 565-0874, Japan; Center for Information and Neural Networks (CiNet), National Institute of Information and Communications Technology (NICT), Osaka, Japan; Institute for Transdisciplinary Graduate Degree Programs, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, Japan; Life and Medical Sciences Area, Health Sciences Discipline, Kobe University, Tomogaoka 7-10-2, Suma-ku, Kobe, Hyogo, 654-0142, Japan. Electronic address: hosodak@nict.go.jp","institution_ids":["https://openalex.org/I98285908","https://openalex.org/I90023481"]},{"raw_affiliation_string":"Institute for Transdisciplinary Graduate Degree Programs, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, Japan","institution_ids":["https://openalex.org/I98285908"]},{"raw_affiliation_string":"RIKEN Center for Biosystems Dynamics Research, 6-2-3 Furuedai, Suita, Osaka, 565-0874, Japan","institution_ids":["https://openalex.org/I4210116810"]},{"raw_affiliation_string":"Life and Medical Sciences Area, Health Sciences Discipline, Kobe University, Tomogaoka 7-10-2, Suma-ku, Kobe, Hyogo, 654-0142, Japan","institution_ids":["https://openalex.org/I65837984"]},{"raw_affiliation_string":"Center for Information and Neural Networks (CiNet), National Institute of Information and Communications Technology (NICT), Osaka, Japan","institution_ids":["https://openalex.org/I90023481"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044081384","display_name":"Shigeto Seno","orcid":"https://orcid.org/0000-0003-3861-6444"},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shigeto Seno","raw_affiliation_strings":["Graduate School of Information Science and Technology, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, Japan"],"affiliations":[{"raw_affiliation_string":"Graduate School of Information Science and Technology, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, Japan","institution_ids":["https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103434572","display_name":"Naomi Murakami","orcid":null},"institutions":[{"id":"https://openalex.org/I4210116810","display_name":"RIKEN Center for Biosystems Dynamics Research","ror":"https://ror.org/023rffy11","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210116810"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Naomi Murakami","raw_affiliation_strings":["RIKEN Center for Biosystems Dynamics Research, 6-2-3 Furuedai, Suita, Osaka, 565-0874, Japan"],"affiliations":[{"raw_affiliation_string":"RIKEN Center for Biosystems Dynamics Research, 6-2-3 Furuedai, Suita, Osaka, 565-0874, Japan","institution_ids":["https://openalex.org/I4210116810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007909918","display_name":"Hideo Matsuda","orcid":"https://orcid.org/0000-0002-4701-3779"},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hideo Matsuda","raw_affiliation_strings":["Graduate School of Information Science and Technology, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, Japan"],"affiliations":[{"raw_affiliation_string":"Graduate School of Information Science and Technology, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, Japan","institution_ids":["https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035509716","display_name":"Y. Osada","orcid":"https://orcid.org/0000-0001-5967-194X"},"institutions":[{"id":"https://openalex.org/I201537933","display_name":"Tohoku University","ror":"https://ror.org/01dq60k83","country_code":"JP","type":"education","lineage":["https://openalex.org/I201537933"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yutaka Osada","raw_affiliation_strings":["Graduate School of Life Sciences, Tohoku University, 6-3 Aoba, Aramaki, Aoba-ku, Sendai, 980-8578, Japan"],"affiliations":[{"raw_affiliation_string":"Graduate School of Life Sciences, Tohoku University, 6-3 Aoba, Aramaki, Aoba-ku, Sendai, 980-8578, Japan","institution_ids":["https://openalex.org/I201537933"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027774932","display_name":"Rikuto Kamiura","orcid":null},"institutions":[{"id":"https://openalex.org/I4210116810","display_name":"RIKEN Center for Biosystems Dynamics Research","ror":"https://ror.org/023rffy11","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210116810"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Rikuto Kamiura","raw_affiliation_strings":["RIKEN Center for Biosystems Dynamics Research, 6-2-3 Furuedai, Suita, Osaka, 565-0874, Japan"],"affiliations":[{"raw_affiliation_string":"RIKEN Center for Biosystems Dynamics Research, 6-2-3 Furuedai, Suita, Osaka, 565-0874, Japan","institution_ids":["https://openalex.org/I4210116810"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065478102","display_name":"Michio Kondoh","orcid":"https://orcid.org/0000-0001-5779-9392"},"institutions":[{"id":"https://openalex.org/I201537933","display_name":"Tohoku University","ror":"https://ror.org/01dq60k83","country_code":"JP","type":"education","lineage":["https://openalex.org/I201537933"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Michio Kondoh","raw_affiliation_strings":["Graduate School of Life Sciences, Tohoku University, 6-3 Aoba, Aramaki, Aoba-ku, Sendai, 980-8578, Japan. Electronic address: michio.kondo.b8@tohoku.ac.jp","Graduate School of Life Sciences, Tohoku University, 6-3 Aoba, Aramaki, Aoba-ku, Sendai, 980-8578, Japan"],"affiliations":[{"raw_affiliation_string":"Graduate School of Life Sciences, Tohoku University, 6-3 Aoba, Aramaki, Aoba-ku, Sendai, 980-8578, Japan. Electronic address: michio.kondo.b8@tohoku.ac.jp","institution_ids":["https://openalex.org/I201537933"]},{"raw_affiliation_string":"Graduate School of Life Sciences, Tohoku University, 6-3 Aoba, Aramaki, Aoba-ku, Sendai, 980-8578, Japan","institution_ids":["https://openalex.org/I201537933"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5065478102","https://openalex.org/A5103164879"],"corresponding_institution_ids":["https://openalex.org/I201537933","https://openalex.org/I4210116810","https://openalex.org/I65837984","https://openalex.org/I90023481","https://openalex.org/I98285908"],"apc_list":{"value":2700,"currency":"USD","value_usd":2700},"apc_paid":null,"fwci":1.2152,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.84374533,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":95},"biblio":{"volume":"235","issue":null,"first_page":"105087","last_page":"105087"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12832","display_name":"Biocrusts and Microbial Ecology","score":0.9502000212669373,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12832","display_name":"Biocrusts and Microbial Ecology","score":0.9502000212669373,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9059000015258789,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ecosystem","display_name":"Ecosystem","score":0.5653214454650879},{"id":"https://openalex.org/keywords/ecosystem-model","display_name":"Ecosystem model","score":0.4500831961631775},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41040870547294617},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.39601752161979675},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.26986533403396606}],"concepts":[{"id":"https://openalex.org/C110872660","wikidata":"https://www.wikidata.org/wiki/Q37813","display_name":"Ecosystem","level":2,"score":0.5653214454650879},{"id":"https://openalex.org/C64107356","wikidata":"https://www.wikidata.org/wiki/Q295046","display_name":"Ecosystem model","level":3,"score":0.4500831961631775},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41040870547294617},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.39601752161979675},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.26986533403396606}],"mesh":[{"descriptor_ui":"D011387","descriptor_name":"Prokaryotic Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011387","descriptor_name":"Prokaryotic Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011387","descriptor_name":"Prokaryotic Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.biosystems.2023.105087","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.biosystems.2023.105087","pdf_url":null,"source":{"id":"https://openalex.org/S99347777","display_name":"Biosystems","issn_l":"0303-2647","issn":["0303-2647","1872-8324"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioSystems","raw_type":"journal-article"},{"id":"pmid:37989470","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37989470","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bio Systems","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Life in Land","score":0.7400000095367432,"id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G1912527298","display_name":null,"funder_award_id":"JP18H04821","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G3775408598","display_name":null,"funder_award_id":"JP20H05533","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G5517144672","display_name":null,"funder_award_id":"JP20H04868","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G7224978941","display_name":null,"funder_award_id":"JP20K06825","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320320912","display_name":"Ministry of Education, Culture, Sports, Science and Technology","ror":"https://ror.org/048rj2z13"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":90,"referenced_works":["https://openalex.org/W1497947649","https://openalex.org/W1511926043","https://openalex.org/W1541447512","https://openalex.org/W1644710420","https://openalex.org/W1798730848","https://openalex.org/W1943327251","https://openalex.org/W1966825657","https://openalex.org/W1967893574","https://openalex.org/W1968033606","https://openalex.org/W1971701354","https://openalex.org/W1973406031","https://openalex.org/W1975622798","https://openalex.org/W1988008273","https://openalex.org/W1996263122","https://openalex.org/W2000532804","https://openalex.org/W2000747374","https://openalex.org/W2001897580","https://openalex.org/W2003865215","https://openalex.org/W2010001710","https://openalex.org/W2028424933","https://openalex.org/W2034328927","https://openalex.org/W2037159992","https://openalex.org/W2042894670","https://openalex.org/W2049546703","https://openalex.org/W2050050314","https://openalex.org/W2052655393","https://openalex.org/W2053016491","https://openalex.org/W2054637019","https://openalex.org/W2058905443","https://openalex.org/W2065363682","https://openalex.org/W2066918346","https://openalex.org/W2073571527","https://openalex.org/W2083310645","https://openalex.org/W2090381460","https://openalex.org/W2095722471","https://openalex.org/W2100845728","https://openalex.org/W2105977292","https://openalex.org/W2106844219","https://openalex.org/W2107336155","https://openalex.org/W2107763376","https://openalex.org/W2112263185","https://openalex.org/W2117291237","https://openalex.org/W2118607342","https://openalex.org/W2132008384","https://openalex.org/W2137670480","https://openalex.org/W2142026735","https://openalex.org/W2153248731","https://openalex.org/W2161365142","https://openalex.org/W2161466984","https://openalex.org/W2169010693","https://openalex.org/W2169175623","https://openalex.org/W2212251850","https://openalex.org/W2228410417","https://openalex.org/W2262129485","https://openalex.org/W2295190630","https://openalex.org/W2464602952","https://openalex.org/W2472337664","https://openalex.org/W2523753740","https://openalex.org/W2562286467","https://openalex.org/W2604318198","https://openalex.org/W2606995208","https://openalex.org/W2625398560","https://openalex.org/W2738793433","https://openalex.org/W2769727931","https://openalex.org/W2777517892","https://openalex.org/W2786672974","https://openalex.org/W2787154907","https://openalex.org/W2805405522","https://openalex.org/W2898108709","https://openalex.org/W2958202299","https://openalex.org/W2963340466","https://openalex.org/W2994774314","https://openalex.org/W2996646524","https://openalex.org/W3091775814","https://openalex.org/W3121268133","https://openalex.org/W3154411924","https://openalex.org/W3188261165","https://openalex.org/W4205215623","https://openalex.org/W4236957795","https://openalex.org/W4288359460","https://openalex.org/W4293584584","https://openalex.org/W4301045096","https://openalex.org/W4302425405","https://openalex.org/W4308164579","https://openalex.org/W4365446447","https://openalex.org/W6628973269","https://openalex.org/W6638229893","https://openalex.org/W6677775367","https://openalex.org/W6730738810","https://openalex.org/W6783710674"],"related_works":["https://openalex.org/W2193640329","https://openalex.org/W2179620014","https://openalex.org/W2359552762","https://openalex.org/W1964941128","https://openalex.org/W2365423012","https://openalex.org/W4229332264","https://openalex.org/W2088317384","https://openalex.org/W2046240022","https://openalex.org/W4248831647","https://openalex.org/W1974617949"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-03-27T14:29:43.386196","created_date":"2025-10-10T00:00:00"}
