{"id":"https://openalex.org/W7164129138","doi":"https://doi.org/10.1016/j.asoc.2026.115680","title":"scCCCT: Single-cell RNA-seq data contrastive clustering network with hierarchical cell transformer","display_name":"scCCCT: Single-cell RNA-seq data contrastive clustering network with hierarchical cell transformer","publication_year":2026,"publication_date":"2026-06-10","ids":{"openalex":"https://openalex.org/W7164129138","doi":"https://doi.org/10.1016/j.asoc.2026.115680"},"language":"en","primary_location":{"id":"doi:10.1016/j.asoc.2026.115680","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.asoc.2026.115680","pdf_url":null,"source":{"id":"https://openalex.org/S140556538","display_name":"Applied Soft Computing","issn_l":"1568-4946","issn":["1568-4946","1872-9681"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Soft Computing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5136261187","display_name":"Shangshang Zhao","orcid":"https://orcid.org/0009-0002-7539-4924"},"institutions":[{"id":"https://openalex.org/I126924076","display_name":"Chongqing Normal University","ror":"https://ror.org/01dcw5w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I126924076"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shangshang Zhao","raw_affiliation_strings":["College of Computer and Infomation Science, Chongqing Normal University, Chongqing, 400030, China"],"raw_orcid":"https://orcid.org/0009-0002-7539-4924","affiliations":[{"raw_affiliation_string":"College of Computer and Infomation Science, Chongqing Normal University, Chongqing, 400030, China","institution_ids":["https://openalex.org/I126924076"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5138329983","display_name":"Zhongyang Zhou","orcid":"https://orcid.org/0009-0001-0209-7905"},"institutions":[{"id":"https://openalex.org/I126924076","display_name":"Chongqing Normal University","ror":"https://ror.org/01dcw5w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I126924076"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhongyang Zhou","raw_affiliation_strings":["College of Computer and Infomation Science, Chongqing Normal University, Chongqing, 400030, China"],"raw_orcid":"https://orcid.org/0009-0001-0209-7905","affiliations":[{"raw_affiliation_string":"College of Computer and Infomation Science, Chongqing Normal University, Chongqing, 400030, China","institution_ids":["https://openalex.org/I126924076"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111059899","display_name":"Bin Tang","orcid":"https://orcid.org/0009-0000-6031-0551"},"institutions":[{"id":"https://openalex.org/I126924076","display_name":"Chongqing Normal University","ror":"https://ror.org/01dcw5w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I126924076"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bin Tang","raw_affiliation_strings":["National Center for Applied Mathematics in Chongqing, Chongqing Normal University, Chongqing, 400030, China"],"raw_orcid":"https://orcid.org/0009-0000-6031-0551","affiliations":[{"raw_affiliation_string":"National Center for Applied Mathematics in Chongqing, Chongqing Normal University, Chongqing, 400030, China","institution_ids":["https://openalex.org/I126924076"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107831201","display_name":"Nan Yu","orcid":"https://orcid.org/0009-0009-9940-8906"},"institutions":[{"id":"https://openalex.org/I126924076","display_name":"Chongqing Normal University","ror":"https://ror.org/01dcw5w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I126924076"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Nanjun Yu","raw_affiliation_strings":["National Center for Applied Mathematics in Chongqing, Chongqing Normal University, Chongqing, 400030, China"],"raw_orcid":"https://orcid.org/0009-0009-9940-8906","affiliations":[{"raw_affiliation_string":"National Center for Applied Mathematics in Chongqing, Chongqing Normal University, Chongqing, 400030, China","institution_ids":["https://openalex.org/I126924076"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5138294413","display_name":"Feng Liu","orcid":"https://orcid.org/0009-0000-3744-4236"},"institutions":[{"id":"https://openalex.org/I126924076","display_name":"Chongqing Normal University","ror":"https://ror.org/01dcw5w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I126924076"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feng Liu","raw_affiliation_strings":["College of Computer and Infomation Science, Chongqing Normal University, Chongqing, 400030, China"],"raw_orcid":"https://orcid.org/0009-0000-3744-4236","affiliations":[{"raw_affiliation_string":"College of Computer and Infomation Science, Chongqing Normal University, Chongqing, 400030, China","institution_ids":["https://openalex.org/I126924076"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083101767","display_name":"Feiyu Chen","orcid":"https://orcid.org/0000-0002-6510-0761"},"institutions":[{"id":"https://openalex.org/I126924076","display_name":"Chongqing Normal University","ror":"https://ror.org/01dcw5w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I126924076"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Feiyu Chen","raw_affiliation_strings":["National Center for Applied Mathematics in Chongqing, Chongqing Normal University, Chongqing, 400030, China"],"raw_orcid":"https://orcid.org/0000-0002-6510-0761","affiliations":[{"raw_affiliation_string":"National Center for Applied Mathematics in Chongqing, Chongqing Normal University, Chongqing, 400030, China","institution_ids":["https://openalex.org/I126924076"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5083101767"],"corresponding_institution_ids":["https://openalex.org/I126924076"],"apc_list":{"value":3350,"currency":"USD","value_usd":3350},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.69872549,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"201","issue":null,"first_page":"115680","last_page":"115680"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11307","display_name":"Domain Adaptation and Few-Shot Learning","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.5479999780654907},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4936000108718872},{"id":"https://openalex.org/keywords/hierarchical-clustering","display_name":"Hierarchical clustering","score":0.4269999861717224},{"id":"https://openalex.org/keywords/transformer","display_name":"Transformer","score":0.3684000074863434},{"id":"https://openalex.org/keywords/fuzzy-clustering","display_name":"Fuzzy clustering","score":0.3183000087738037}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7763000130653381},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5479999780654907},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5245000123977661},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4936000108718872},{"id":"https://openalex.org/C92835128","wikidata":"https://www.wikidata.org/wiki/Q1277447","display_name":"Hierarchical clustering","level":3,"score":0.4269999861717224},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41040000319480896},{"id":"https://openalex.org/C66322947","wikidata":"https://www.wikidata.org/wiki/Q11658","display_name":"Transformer","level":3,"score":0.3684000074863434},{"id":"https://openalex.org/C17212007","wikidata":"https://www.wikidata.org/wiki/Q5511111","display_name":"Fuzzy clustering","level":3,"score":0.3183000087738037},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.2547999918460846},{"id":"https://openalex.org/C94641424","wikidata":"https://www.wikidata.org/wiki/Q5172845","display_name":"Correlation clustering","level":3,"score":0.25380000472068787}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1016/j.asoc.2026.115680","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.asoc.2026.115680","pdf_url":null,"source":{"id":"https://openalex.org/S140556538","display_name":"Applied Soft Computing","issn_l":"1568-4946","issn":["1568-4946","1872-9681"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Soft Computing","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320323172","display_name":"Natural Science Foundation of Chongqing","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":38,"referenced_works":["https://openalex.org/W2802145570","https://openalex.org/W2907783748","https://openalex.org/W2937917790","https://openalex.org/W2997280954","https://openalex.org/W3005127469","https://openalex.org/W3099810371","https://openalex.org/W3127238141","https://openalex.org/W3138479716","https://openalex.org/W3196630240","https://openalex.org/W3196939060","https://openalex.org/W3198628780","https://openalex.org/W3216323060","https://openalex.org/W4205281625","https://openalex.org/W4213136259","https://openalex.org/W4235169531","https://openalex.org/W4280630188","https://openalex.org/W4297176426","https://openalex.org/W4306730653","https://openalex.org/W4315621823","https://openalex.org/W4321748573","https://openalex.org/W4322768301","https://openalex.org/W4378348563","https://openalex.org/W4379521442","https://openalex.org/W4387068120","https://openalex.org/W4387125037","https://openalex.org/W4396519563","https://openalex.org/W4401672420","https://openalex.org/W4402455491","https://openalex.org/W4402902856","https://openalex.org/W4402912319","https://openalex.org/W4403198130","https://openalex.org/W4403443075","https://openalex.org/W4404918237","https://openalex.org/W4406047592","https://openalex.org/W4413374944","https://openalex.org/W4414871052","https://openalex.org/W7133607513","https://openalex.org/W7161273342"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2026-06-11T00:00:00"}
