{"id":"https://openalex.org/W2791982700","doi":"https://doi.org/10.1016/b978-0-12-809633-8.20507-4","title":"Population-Based Sampling and Fragment-Based De Novo Protein Structure Prediction","display_name":"Population-Based Sampling and Fragment-Based De Novo Protein Structure Prediction","publication_year":2018,"publication_date":"2018-03-24","ids":{"openalex":"https://openalex.org/W2791982700","doi":"https://doi.org/10.1016/b978-0-12-809633-8.20507-4","mag":"2791982700"},"language":"en","primary_location":{"id":"doi:10.1016/b978-0-12-809633-8.20507-4","is_oa":false,"landing_page_url":"https://doi.org/10.1016/b978-0-12-809633-8.20507-4","pdf_url":null,"source":{"id":"https://openalex.org/S4306463230","display_name":"Elsevier eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Encyclopedia of Bioinformatics and Computational Biology","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005612122","display_name":"David Simoncini","orcid":"https://orcid.org/0000-0002-3772-5473"},"institutions":[{"id":"https://openalex.org/I4210152422","display_name":"Universit\u00e9 Toulouse - Jean Jaur\u00e8s","ror":"https://ror.org/04ezk3x31","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210152422","https://openalex.org/I4405258862"]},{"id":"https://openalex.org/I4210119061","display_name":"Institut de Recherche en Informatique de Toulouse","ror":"https://ror.org/01rx4qw44","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I205747304","https://openalex.org/I205747304","https://openalex.org/I4210119061","https://openalex.org/I4387153255","https://openalex.org/I4405258862","https://openalex.org/I4405258862"]},{"id":"https://openalex.org/I4210150921","display_name":"RIKEN Center for Integrative Medical Sciences","ror":"https://ror.org/04mb6s476","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210150921"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555","https://openalex.org/I4405258862"]},{"id":"https://openalex.org/I3131550300","display_name":"Universit\u00e9 Toulouse-I-Capitole","ror":"https://ror.org/0443n9e75","country_code":"FR","type":"education","lineage":["https://openalex.org/I3131550300"]},{"id":"https://openalex.org/I4210160189","display_name":"Institut Polytechnique de Bordeaux","ror":"https://ror.org/054qv7y42","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210160189"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]}],"countries":["FR","JP"],"is_corresponding":true,"raw_author_name":"David Simoncini","raw_affiliation_strings":["RIKEN, Yokohama, Japan","University of Toulouse, Toulouse, France","IRIT-REVA - Real Expression Artificial Life (Institut de recherche en informatique de Toulouse - IRIT\r\n2 rue Charles Camichel \r\n31071 Toulouse Cedex 7 - France)","UT Capitole - Universit\u00e9 Toulouse Capitole (2 rue du Doyen-Gabriel-Marty - 31042 Toulouse Cedex 9 - France)","RIKEN Yokohama campus (France)"],"affiliations":[{"raw_affiliation_string":"RIKEN, Yokohama, Japan","institution_ids":["https://openalex.org/I4210150921"]},{"raw_affiliation_string":"University of Toulouse, Toulouse, France","institution_ids":["https://openalex.org/I17866349"]},{"raw_affiliation_string":"IRIT-REVA - Real Expression Artificial Life (Institut de recherche en informatique de Toulouse - IRIT\r\n2 rue Charles Camichel \r\n31071 Toulouse Cedex 7 - France)","institution_ids":["https://openalex.org/I4210152422","https://openalex.org/I134560555","https://openalex.org/I4210119061","https://openalex.org/I3131550300","https://openalex.org/I4210160189"]},{"raw_affiliation_string":"UT Capitole - Universit\u00e9 Toulouse Capitole (2 rue du Doyen-Gabriel-Marty - 31042 Toulouse Cedex 9 - France)","institution_ids":["https://openalex.org/I3131550300"]},{"raw_affiliation_string":"RIKEN Yokohama campus (France)","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044307373","display_name":"Kam Y. J. Zhang","orcid":"https://orcid.org/0000-0002-9282-8045"},"institutions":[{"id":"https://openalex.org/I4210150921","display_name":"RIKEN Center for Integrative Medical Sciences","ror":"https://ror.org/04mb6s476","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210150921"]},{"id":"https://openalex.org/I4210116810","display_name":"RIKEN Center for Biosystems Dynamics Research","ror":"https://ror.org/023rffy11","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210110652","https://openalex.org/I4210116810"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kam Y.J. Zhang","raw_affiliation_strings":["RIKEN, Yokohama, Japan","RIKEN Yokohama campus (France)","RIKEN BDR - RIKEN Center for Biosystems Dynamics Research [Kobe] (2-2-3 Minatojima-minamimachi, Chuo-ku \r\nKobe, Hyogo \r\n650-0047 Japan - Japan)"],"affiliations":[{"raw_affiliation_string":"RIKEN, Yokohama, Japan","institution_ids":["https://openalex.org/I4210150921"]},{"raw_affiliation_string":"RIKEN Yokohama campus (France)","institution_ids":[]},{"raw_affiliation_string":"RIKEN BDR - RIKEN Center for Biosystems Dynamics Research [Kobe] (2-2-3 Minatojima-minamimachi, Chuo-ku \r\nKobe, Hyogo \r\n650-0047 Japan - Japan)","institution_ids":["https://openalex.org/I4210116810"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5005612122"],"corresponding_institution_ids":["https://openalex.org/I134560555","https://openalex.org/I17866349","https://openalex.org/I3131550300","https://openalex.org/I4210119061","https://openalex.org/I4210150921","https://openalex.org/I4210152422","https://openalex.org/I4210160189"],"apc_list":null,"apc_paid":null,"fwci":0.7963,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.69361028,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"774","last_page":"784"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sampling","display_name":"Sampling (signal processing)","score":0.7797223925590515},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6501989960670471},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.6498781442642212},{"id":"https://openalex.org/keywords/evolutionary-algorithm","display_name":"Evolutionary algorithm","score":0.5069563388824463},{"id":"https://openalex.org/keywords/range","display_name":"Range (aeronautics)","score":0.48916104435920715},{"id":"https://openalex.org/keywords/funnel","display_name":"Funnel","score":0.4601609706878662},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.45653825998306274},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40790611505508423},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3819568157196045},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.36875373125076294},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.3242517113685608},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.19412556290626526},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.14531219005584717},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10910370945930481}],"concepts":[{"id":"https://openalex.org/C140779682","wikidata":"https://www.wikidata.org/wiki/Q210868","display_name":"Sampling (signal processing)","level":3,"score":0.7797223925590515},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6501989960670471},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.6498781442642212},{"id":"https://openalex.org/C159149176","wikidata":"https://www.wikidata.org/wiki/Q14489129","display_name":"Evolutionary algorithm","level":2,"score":0.5069563388824463},{"id":"https://openalex.org/C204323151","wikidata":"https://www.wikidata.org/wiki/Q905424","display_name":"Range (aeronautics)","level":2,"score":0.48916104435920715},{"id":"https://openalex.org/C17435862","wikidata":"https://www.wikidata.org/wiki/Q29957","display_name":"Funnel","level":2,"score":0.4601609706878662},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.45653825998306274},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40790611505508423},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3819568157196045},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.36875373125076294},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.3242517113685608},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.19412556290626526},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.14531219005584717},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10910370945930481},{"id":"https://openalex.org/C106131492","wikidata":"https://www.wikidata.org/wiki/Q3072260","display_name":"Filter (signal processing)","level":2,"score":0.0},{"id":"https://openalex.org/C146978453","wikidata":"https://www.wikidata.org/wiki/Q3798668","display_name":"Aerospace engineering","level":1,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1016/b978-0-12-809633-8.20507-4","is_oa":false,"landing_page_url":"https://doi.org/10.1016/b978-0-12-809633-8.20507-4","pdf_url":null,"source":{"id":"https://openalex.org/S4306463230","display_name":"Elsevier eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Encyclopedia of Bioinformatics and Computational Biology","raw_type":"book-chapter"},{"id":"pmh:oai:HAL:hal-02945383v1","is_oa":false,"landing_page_url":"https://hal.science/hal-02945383","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://www.sciencedirect.com/science/article/pii/B9780128096338205074?via%3Dihub","raw_type":"Book sections"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Affordable and clean energy","score":0.6100000143051147,"id":"https://metadata.un.org/sdg/7"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":70,"referenced_works":["https://openalex.org/W1297543","https://openalex.org/W113688923","https://openalex.org/W133371706","https://openalex.org/W1481729573","https://openalex.org/W1491063910","https://openalex.org/W1546937057","https://openalex.org/W1548178570","https://openalex.org/W1557140950","https://openalex.org/W1568834902","https://openalex.org/W1584726693","https://openalex.org/W1592150368","https://openalex.org/W1659842140","https://openalex.org/W1692958259","https://openalex.org/W1968075052","https://openalex.org/W1975826167","https://openalex.org/W1980425121","https://openalex.org/W1991470077","https://openalex.org/W1996587137","https://openalex.org/W1997926446","https://openalex.org/W1999060539","https://openalex.org/W1999622289","https://openalex.org/W2002098814","https://openalex.org/W2004461664","https://openalex.org/W2017040423","https://openalex.org/W2017319953","https://openalex.org/W2024060531","https://openalex.org/W2026648849","https://openalex.org/W2030661492","https://openalex.org/W2033746410","https://openalex.org/W2035885031","https://openalex.org/W2042398195","https://openalex.org/W2045777307","https://openalex.org/W2048351668","https://openalex.org/W2052266084","https://openalex.org/W2058141315","https://openalex.org/W2066381187","https://openalex.org/W2069088519","https://openalex.org/W2074421756","https://openalex.org/W2076905564","https://openalex.org/W2080382112","https://openalex.org/W2092995112","https://openalex.org/W2101060473","https://openalex.org/W2108583265","https://openalex.org/W2115167726","https://openalex.org/W2119641437","https://openalex.org/W2126159149","https://openalex.org/W2138309709","https://openalex.org/W2144181598","https://openalex.org/W2155858308","https://openalex.org/W2166348281","https://openalex.org/W2201713963","https://openalex.org/W2337606518","https://openalex.org/W2339500526","https://openalex.org/W2435948545","https://openalex.org/W2475481088","https://openalex.org/W2476070288","https://openalex.org/W2491008760","https://openalex.org/W2570756324","https://openalex.org/W3023540311","https://openalex.org/W3105699207","https://openalex.org/W6600052677","https://openalex.org/W6605457611","https://openalex.org/W6632254352","https://openalex.org/W6633992998","https://openalex.org/W6635561709","https://openalex.org/W6637564782","https://openalex.org/W6650843191","https://openalex.org/W6661794840","https://openalex.org/W6703727622","https://openalex.org/W6719982585"],"related_works":["https://openalex.org/W2073875810","https://openalex.org/W2356551568","https://openalex.org/W2081113335","https://openalex.org/W2358635018","https://openalex.org/W2364686644","https://openalex.org/W2889922688","https://openalex.org/W2368101485","https://openalex.org/W3201452447","https://openalex.org/W4242602405","https://openalex.org/W2098552852"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
