{"id":"https://openalex.org/W3109992761","doi":"https://doi.org/10.1016/b978-0-12-809633-8.20485-8","title":"Algorithms for Structure Comparison and Analysis: Docking","display_name":"Algorithms for Structure Comparison and Analysis: Docking","publication_year":2018,"publication_date":"2018-06-14","ids":{"openalex":"https://openalex.org/W3109992761","doi":"https://doi.org/10.1016/b978-0-12-809633-8.20485-8","mag":"3109992761"},"language":"en","primary_location":{"id":"doi:10.1016/b978-0-12-809633-8.20485-8","is_oa":false,"landing_page_url":"https://doi.org/10.1016/b978-0-12-809633-8.20485-8","pdf_url":null,"source":{"id":"https://openalex.org/S4306463230","display_name":"Elsevier eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Encyclopedia of Bioinformatics and Computational Biology","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087181065","display_name":"Giuseppe Tradigo","orcid":"https://orcid.org/0000-0002-1367-8676"},"institutions":[{"id":"https://openalex.org/I45204951","display_name":"University of Calabria","ror":"https://ror.org/02rc97e94","country_code":"IT","type":"education","lineage":["https://openalex.org/I45204951"]},{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["IT","US"],"is_corresponding":true,"raw_author_name":"Giuseppe Tradigo","raw_affiliation_strings":["University of Calabria, Rende, Italy","University of Florida, Gainsville, United States"],"affiliations":[{"raw_affiliation_string":"University of Calabria, Rende, Italy","institution_ids":["https://openalex.org/I45204951"]},{"raw_affiliation_string":"University of Florida, Gainsville, United States","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047303706","display_name":"Francesca Rondinelli","orcid":null},"institutions":[{"id":"https://openalex.org/I71267560","display_name":"University of Naples Federico II","ror":"https://ror.org/05290cv24","country_code":"IT","type":"education","lineage":["https://openalex.org/I71267560"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Francesca Rondinelli","raw_affiliation_strings":["Universit\u00e0 degli Studi di Napoli Federico II, Napoli, Italy"],"affiliations":[{"raw_affiliation_string":"Universit\u00e0 degli Studi di Napoli Federico II, Napoli, Italy","institution_ids":["https://openalex.org/I71267560"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016630267","display_name":"Gianluca Pollastri","orcid":"https://orcid.org/0000-0002-5825-4949"},"institutions":[{"id":"https://openalex.org/I100930933","display_name":"University College Dublin","ror":"https://ror.org/05m7pjf47","country_code":"IE","type":"education","lineage":["https://openalex.org/I100930933"]}],"countries":["IE"],"is_corresponding":false,"raw_author_name":"Gianluca Pollastri","raw_affiliation_strings":["University College Dublin, Dublin, Ireland"],"affiliations":[{"raw_affiliation_string":"University College Dublin, Dublin, Ireland","institution_ids":["https://openalex.org/I100930933"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5087181065"],"corresponding_institution_ids":["https://openalex.org/I33213144","https://openalex.org/I45204951"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.29368843,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"77","last_page":"80"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.8596000075340271,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.8596000075340271,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.7807560563087463},{"id":"https://openalex.org/keywords/protein\u2013ligand-docking","display_name":"Protein\u2013ligand docking","score":0.6382585763931274},{"id":"https://openalex.org/keywords/molecule","display_name":"Molecule","score":0.6347885131835938},{"id":"https://openalex.org/keywords/searching-the-conformational-space-for-docking","display_name":"Searching the conformational space for docking","score":0.5690644383430481},{"id":"https://openalex.org/keywords/nucleic-acid","display_name":"Nucleic acid","score":0.5522423386573792},{"id":"https://openalex.org/keywords/rigidity","display_name":"Rigidity (electromagnetism)","score":0.5062095522880554},{"id":"https://openalex.org/keywords/amino-acid-residue","display_name":"Amino acid residue","score":0.46187806129455566},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.45668116211891174},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.4351779818534851},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3860505223274231},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.36099597811698914},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3517839312553406},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.3296605944633484},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.26233935356140137},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.25482702255249023},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.12734508514404297},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11786797642707825},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.10768336057662964},{"id":"https://openalex.org/keywords/organic-chemistry","display_name":"Organic chemistry","score":0.07727548480033875}],"concepts":[{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.7807560563087463},{"id":"https://openalex.org/C77319485","wikidata":"https://www.wikidata.org/wiki/Q7251520","display_name":"Protein\u2013ligand docking","level":4,"score":0.6382585763931274},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.6347885131835938},{"id":"https://openalex.org/C44695244","wikidata":"https://www.wikidata.org/wiki/Q7441727","display_name":"Searching the conformational space for docking","level":3,"score":0.5690644383430481},{"id":"https://openalex.org/C24107716","wikidata":"https://www.wikidata.org/wiki/Q123619","display_name":"Nucleic acid","level":2,"score":0.5522423386573792},{"id":"https://openalex.org/C160343418","wikidata":"https://www.wikidata.org/wiki/Q185256","display_name":"Rigidity (electromagnetism)","level":2,"score":0.5062095522880554},{"id":"https://openalex.org/C2994376932","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Amino acid residue","level":4,"score":0.46187806129455566},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.45668116211891174},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.4351779818534851},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3860505223274231},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.36099597811698914},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3517839312553406},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.3296605944633484},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.26233935356140137},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.25482702255249023},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.12734508514404297},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11786797642707825},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.10768336057662964},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.07727548480033875},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1016/b978-0-12-809633-8.20485-8","is_oa":false,"landing_page_url":"https://doi.org/10.1016/b978-0-12-809633-8.20485-8","pdf_url":null,"source":{"id":"https://openalex.org/S4306463230","display_name":"Elsevier eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Encyclopedia of Bioinformatics and Computational Biology","raw_type":"book-chapter"},{"id":"pmh:oai:iris.uniecampus.it:11389/36390","is_oa":false,"landing_page_url":"http://hdl.handle.net/11389/36390","pdf_url":null,"source":{"id":"https://openalex.org/S4306400077","display_name":"IRIS eCampus Telematic University (Universit\u00e0 degli Studi eCampus)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I167322064","host_organization_name":"Universit\u00e0 degli Studi eCampus","host_organization_lineage":["https://openalex.org/I167322064"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W599375781","https://openalex.org/W605089255","https://openalex.org/W1526585766","https://openalex.org/W1592950931","https://openalex.org/W1968922152","https://openalex.org/W2016385245","https://openalex.org/W2016766601","https://openalex.org/W2023272942","https://openalex.org/W2032836888","https://openalex.org/W2039193100","https://openalex.org/W2041449172","https://openalex.org/W2050456292","https://openalex.org/W2061285938","https://openalex.org/W2063980568","https://openalex.org/W2074978479","https://openalex.org/W2077332797","https://openalex.org/W2077392616","https://openalex.org/W2111397525","https://openalex.org/W2128796532","https://openalex.org/W2134967712","https://openalex.org/W2137167381","https://openalex.org/W2155796229","https://openalex.org/W2188961573","https://openalex.org/W2403343003","https://openalex.org/W2505369411","https://openalex.org/W2604726146","https://openalex.org/W6713210016"],"related_works":["https://openalex.org/W4310018788","https://openalex.org/W1992786240","https://openalex.org/W4213013656","https://openalex.org/W4246463539","https://openalex.org/W4235673852","https://openalex.org/W2037320233","https://openalex.org/W3043968438","https://openalex.org/W1974422922","https://openalex.org/W2058311929","https://openalex.org/W4309353019"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
