{"id":"https://openalex.org/W2800351704","doi":"https://doi.org/10.1016/b978-0-12-809633-8.20290-2","title":"Network Inference and Reconstruction in Bioinformatics","display_name":"Network Inference and Reconstruction in Bioinformatics","publication_year":2018,"publication_date":"2018-04-23","ids":{"openalex":"https://openalex.org/W2800351704","doi":"https://doi.org/10.1016/b978-0-12-809633-8.20290-2","mag":"2800351704"},"language":"en","primary_location":{"id":"doi:10.1016/b978-0-12-809633-8.20290-2","is_oa":false,"landing_page_url":"https://doi.org/10.1016/b978-0-12-809633-8.20290-2","pdf_url":null,"source":{"id":"https://openalex.org/S4306463230","display_name":"Elsevier eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Encyclopedia of Bioinformatics and Computational Biology","raw_type":"book-chapter"},"type":"reference-entry","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007136874","display_name":"Paolo Tieri","orcid":"https://orcid.org/0000-0002-3635-7664"},"institutions":[{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I905677539","display_name":"IAC (United States)","ror":"https://ror.org/01sbnfq90","country_code":"US","type":"company","lineage":["https://openalex.org/I905677539"]}],"countries":["IT","US"],"is_corresponding":false,"raw_author_name":"Paolo Tieri","raw_affiliation_strings":["CNR National Research Council, IAC Institute for Applied Computing \u201cMauro Picone\u201d, Rome, Italy","CNR National Research Council, IAC Institute for Applied Computing \"Mauro Picone\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CNR National Research Council, IAC Institute for Applied Computing \u201cMauro Picone\u201d, Rome, Italy","institution_ids":["https://openalex.org/I4210155236","https://openalex.org/I905677539"]},{"raw_affiliation_string":"CNR National Research Council, IAC Institute for Applied Computing \"Mauro Picone\", Rome, Italy","institution_ids":["https://openalex.org/I4210155236"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074179530","display_name":"Lorenzo Farina","orcid":"https://orcid.org/0000-0001-8314-6029"},"institutions":[{"id":"https://openalex.org/I4210115688","display_name":"Institute for Systems Analysis","ror":"https://ror.org/02kmet255","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210115688"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210162062","display_name":"Istituto di Analisi dei Sistemi ed Informatica Antonio Ruberti","ror":"https://ror.org/054ye0e45","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210155236","https://openalex.org/I4210162062"]},{"id":"https://openalex.org/I861853513","display_name":"Sapienza University of Rome","ror":"https://ror.org/02be6w209","country_code":"IT","type":"education","lineage":["https://openalex.org/I861853513"]}],"countries":["IT","RU"],"is_corresponding":false,"raw_author_name":"Lorenzo Farina","raw_affiliation_strings":["Department of Computer, Control and Management Engineering \u201cA. Ruberti\u201d, Sapienza University of Rome, Italy and CNR National Research Council, IASI Institute of Systems Analysis and Computer Science \"Antonio Ruberti\", Rome, Italy","Department of Computer, Control and Management Engineering \"A. Ruberti\", Sapienza University of Rome, Italy and CNR National Research Council, IASI Institute of Systems Analysis and Computer Science \"Antonio Ruberti\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer, Control and Management Engineering \u201cA. Ruberti\u201d, Sapienza University of Rome, Italy and CNR National Research Council, IASI Institute of Systems Analysis and Computer Science \"Antonio Ruberti\", Rome, Italy","institution_ids":["https://openalex.org/I4210115688"]},{"raw_affiliation_string":"Department of Computer, Control and Management Engineering \"A. Ruberti\", Sapienza University of Rome, Italy and CNR National Research Council, IASI Institute of Systems Analysis and Computer Science \"Antonio Ruberti\", Rome, Italy","institution_ids":["https://openalex.org/I4210155236","https://openalex.org/I4210162062","https://openalex.org/I861853513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026328253","display_name":"Manuela Petti","orcid":"https://orcid.org/0000-0002-0149-161X"},"institutions":[{"id":"https://openalex.org/I4210150112","display_name":"Fondazione Santa Lucia","ror":"https://ror.org/05rcxtd95","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210150112","https://openalex.org/I4210153126"]},{"id":"https://openalex.org/I861853513","display_name":"Sapienza University of Rome","ror":"https://ror.org/02be6w209","country_code":"IT","type":"education","lineage":["https://openalex.org/I861853513"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Manuela Petti","raw_affiliation_strings":["Department of Computer, Control and Management Engineering \"A. Ruberti\", Sapienza University of Rome, Italy and Neuroelectrical Imaging and BCI Lab, Fondazione Santa Lucia IRCSS, Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer, Control and Management Engineering \"A. Ruberti\", Sapienza University of Rome, Italy and Neuroelectrical Imaging and BCI Lab, Fondazione Santa Lucia IRCSS, Rome, Italy","institution_ids":["https://openalex.org/I4210150112","https://openalex.org/I861853513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005627910","display_name":"Laura Astolfi","orcid":"https://orcid.org/0000-0002-1025-7526"},"institutions":[{"id":"https://openalex.org/I4210150112","display_name":"Fondazione Santa Lucia","ror":"https://ror.org/05rcxtd95","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210150112","https://openalex.org/I4210153126"]},{"id":"https://openalex.org/I861853513","display_name":"Sapienza University of Rome","ror":"https://ror.org/02be6w209","country_code":"IT","type":"education","lineage":["https://openalex.org/I861853513"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Laura Astolfi","raw_affiliation_strings":["Department of Computer, Control and Management Engineering \"A. Ruberti\", Sapienza University of Rome, Italy and Neuroelectrical Imaging and BCI Lab, Fondazione Santa Lucia IRCSS, Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer, Control and Management Engineering \"A. Ruberti\", Sapienza University of Rome, Italy and Neuroelectrical Imaging and BCI Lab, Fondazione Santa Lucia IRCSS, Rome, Italy","institution_ids":["https://openalex.org/I4210150112","https://openalex.org/I861853513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043250067","display_name":"Paola Paci","orcid":"https://orcid.org/0000-0002-9393-2047"},"institutions":[{"id":"https://openalex.org/I4210115688","display_name":"Institute for Systems Analysis","ror":"https://ror.org/02kmet255","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210115688"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210162062","display_name":"Istituto di Analisi dei Sistemi ed Informatica Antonio Ruberti","ror":"https://ror.org/054ye0e45","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210155236","https://openalex.org/I4210162062"]}],"countries":["IT","RU"],"is_corresponding":false,"raw_author_name":"Paola Paci","raw_affiliation_strings":["CNR National Research Council, IASI Institute of Systems Analysis and Computer Science \u201cAntonio Ruberti\u201d, Rome, Italy","CNR National Research Council, IASI Institute of Systems Analysis and Computer Science \"Antonio Ruberti\", Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CNR National Research Council, IASI Institute of Systems Analysis and Computer Science \u201cAntonio Ruberti\u201d, Rome, Italy","institution_ids":["https://openalex.org/I4210115688"]},{"raw_affiliation_string":"CNR National Research Council, IASI Institute of Systems Analysis and Computer Science \"Antonio Ruberti\", Rome, Italy","institution_ids":["https://openalex.org/I4210155236","https://openalex.org/I4210162062"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010454141","display_name":"Filippo Castiglione","orcid":"https://orcid.org/0000-0002-1442-3552"},"institutions":[{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Filippo Castiglione","raw_affiliation_strings":["National Research Council of Italy, Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Research Council of Italy, Rome, Italy","institution_ids":["https://openalex.org/I4210155236"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":57,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"805","last_page":"813"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.6909469366073608},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6753444671630859},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.659307062625885},{"id":"https://openalex.org/keywords/modelling-biological-systems","display_name":"Modelling biological systems","score":0.5791205763816833},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5666658878326416},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.4803568124771118},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4680813252925873},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.466524213552475},{"id":"https://openalex.org/keywords/perspective","display_name":"Perspective (graphical)","score":0.4621802866458893},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4573383629322052},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4366218149662018},{"id":"https://openalex.org/keywords/completeness","display_name":"Completeness (order theory)","score":0.4292842745780945},{"id":"https://openalex.org/keywords/cognitive-science","display_name":"Cognitive science","score":0.32713383436203003},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3086465001106262},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10178890824317932},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.07777798175811768}],"concepts":[{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.6909469366073608},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6753444671630859},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.659307062625885},{"id":"https://openalex.org/C137866125","wikidata":"https://www.wikidata.org/wiki/Q4299308","display_name":"Modelling biological systems","level":3,"score":0.5791205763816833},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5666658878326416},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.4803568124771118},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4680813252925873},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.466524213552475},{"id":"https://openalex.org/C12713177","wikidata":"https://www.wikidata.org/wiki/Q1900281","display_name":"Perspective (graphical)","level":2,"score":0.4621802866458893},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4573383629322052},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4366218149662018},{"id":"https://openalex.org/C17231256","wikidata":"https://www.wikidata.org/wiki/Q5156540","display_name":"Completeness (order theory)","level":2,"score":0.4292842745780945},{"id":"https://openalex.org/C188147891","wikidata":"https://www.wikidata.org/wiki/Q147638","display_name":"Cognitive science","level":1,"score":0.32713383436203003},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3086465001106262},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10178890824317932},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.07777798175811768},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1016/b978-0-12-809633-8.20290-2","is_oa":false,"landing_page_url":"https://doi.org/10.1016/b978-0-12-809633-8.20290-2","pdf_url":null,"source":{"id":"https://openalex.org/S4306463230","display_name":"Elsevier eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Encyclopedia of Bioinformatics and Computational Biology","raw_type":"book-chapter"},{"id":"pmh:oai:iris.uniroma1.it:11573/1259532","is_oa":false,"landing_page_url":"http://hdl.handle.net/11573/1259532","pdf_url":null,"source":{"id":"https://openalex.org/S4377196107","display_name":"IRIS Research product catalog (Sapienza University of Rome)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":68,"referenced_works":["https://openalex.org/W1904367196","https://openalex.org/W1929627202","https://openalex.org/W1963522244","https://openalex.org/W1974764791","https://openalex.org/W1985434154","https://openalex.org/W1985669994","https://openalex.org/W1985911638","https://openalex.org/W1986050428","https://openalex.org/W1986314158","https://openalex.org/W1988766789","https://openalex.org/W1990315216","https://openalex.org/W1992452843","https://openalex.org/W1993418188","https://openalex.org/W1995152101","https://openalex.org/W1995869668","https://openalex.org/W1999653836","https://openalex.org/W2003003919","https://openalex.org/W2009914532","https://openalex.org/W2020301095","https://openalex.org/W2038122249","https://openalex.org/W2043364653","https://openalex.org/W2062533676","https://openalex.org/W2065619992","https://openalex.org/W2066580949","https://openalex.org/W2074110893","https://openalex.org/W2077491345","https://openalex.org/W2097532544","https://openalex.org/W2097651291","https://openalex.org/W2105129830","https://openalex.org/W2105924489","https://openalex.org/W2110553827","https://openalex.org/W2115108153","https://openalex.org/W2117663940","https://openalex.org/W2117994680","https://openalex.org/W2118607021","https://openalex.org/W2119220491","https://openalex.org/W2126717546","https://openalex.org/W2127786259","https://openalex.org/W2131562240","https://openalex.org/W2136562407","https://openalex.org/W2137896695","https://openalex.org/W2138397600","https://openalex.org/W2140239055","https://openalex.org/W2141152663","https://openalex.org/W2156716434","https://openalex.org/W2157121418","https://openalex.org/W2163296115","https://openalex.org/W2163480486","https://openalex.org/W2163575276","https://openalex.org/W2169950095","https://openalex.org/W2174632898","https://openalex.org/W2178225550","https://openalex.org/W2215000673","https://openalex.org/W2284179650","https://openalex.org/W2313540090","https://openalex.org/W2317662115","https://openalex.org/W2573160687","https://openalex.org/W2578695285","https://openalex.org/W2592729027","https://openalex.org/W2616922646","https://openalex.org/W2619280902","https://openalex.org/W2757234574","https://openalex.org/W3197989168","https://openalex.org/W4211091012","https://openalex.org/W4300711810","https://openalex.org/W6602875886","https://openalex.org/W6639807419","https://openalex.org/W6685074798"],"related_works":["https://openalex.org/W2158714033","https://openalex.org/W4210989272","https://openalex.org/W1975586684","https://openalex.org/W4206945140","https://openalex.org/W2063941210","https://openalex.org/W4386628104","https://openalex.org/W2127864418","https://openalex.org/W2598362101","https://openalex.org/W2947028852","https://openalex.org/W2212032968"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":12},{"year":2021,"cited_by_count":16},{"year":2020,"cited_by_count":14},{"year":2019,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
