{"id":"https://openalex.org/W2116146891","doi":"https://doi.org/10.1016/0304-3975(95)92848-r","title":"A space efficient algorithm for finding the best nonoverlapping alignment score","display_name":"A space efficient algorithm for finding the best nonoverlapping alignment score","publication_year":1995,"publication_date":"1995-07-01","ids":{"openalex":"https://openalex.org/W2116146891","doi":"https://doi.org/10.1016/0304-3975(95)92848-r","mag":"2116146891"},"language":"en","primary_location":{"id":"doi:10.1016/0304-3975(95)92848-r","is_oa":true,"landing_page_url":"https://doi.org/10.1016/0304-3975(95)92848-r","pdf_url":"https://www.sciencedirect.com/science/article/pii/030439759592848R/pdf","source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://www.sciencedirect.com/science/article/pii/030439759592848R/pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065328235","display_name":"Gary Benson","orcid":"https://orcid.org/0000-0003-2374-5462"},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Gary Benson","raw_affiliation_strings":["Department of Mathematics, University of Southern California, 1042 W. 36th Place, DRB 155, Los Angeles, CA 90089-1113, USA","Department of Mathematics, University of Southern California, 1042 W. 36th Place, DRB 155, Los Angeles, CA 90089-1113, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Southern California, 1042 W. 36th Place, DRB 155, Los Angeles, CA 90089-1113, USA","institution_ids":["https://openalex.org/I1174212"]},{"raw_affiliation_string":"Department of Mathematics, University of Southern California, 1042 W. 36th Place, DRB 155, Los Angeles, CA 90089-1113, USA#TAB#","institution_ids":["https://openalex.org/I1174212"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5065328235"],"corresponding_institution_ids":["https://openalex.org/I1174212"],"apc_list":{"value":2880,"currency":"USD","value_usd":2880},"apc_paid":null,"fwci":0.59,"has_fulltext":true,"cited_by_count":36,"citation_normalized_percentile":{"value":0.77378215,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"145","issue":"1-2","first_page":"357","last_page":"369"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9921000003814697,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/substring","display_name":"Substring","score":0.9679577350616455},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.6881222128868103},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6502425670623779},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.5654028058052063},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5254132747650146},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5090160369873047},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.49252328276634216},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.43224337697029114},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.39851731061935425},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3888893127441406},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.37727582454681396},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3119407892227173},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2943098545074463},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2845589220523834},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.17371541261672974}],"concepts":[{"id":"https://openalex.org/C182407805","wikidata":"https://www.wikidata.org/wiki/Q2626534","display_name":"Substring","level":3,"score":0.9679577350616455},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.6881222128868103},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6502425670623779},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.5654028058052063},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5254132747650146},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5090160369873047},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.49252328276634216},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.43224337697029114},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.39851731061935425},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3888893127441406},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.37727582454681396},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3119407892227173},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2943098545074463},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2845589220523834},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.17371541261672974},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1016/0304-3975(95)92848-r","is_oa":true,"landing_page_url":"https://doi.org/10.1016/0304-3975(95)92848-r","pdf_url":"https://www.sciencedirect.com/science/article/pii/030439759592848R/pdf","source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1016/0304-3975(95)92848-r","is_oa":true,"landing_page_url":"https://doi.org/10.1016/0304-3975(95)92848-r","pdf_url":"https://www.sciencedirect.com/science/article/pii/030439759592848R/pdf","source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2116146891.pdf","grobid_xml":"https://content.openalex.org/works/W2116146891.grobid-xml"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W1637782217","https://openalex.org/W1647671624","https://openalex.org/W1674453943","https://openalex.org/W1970026646","https://openalex.org/W2087064593","https://openalex.org/W2096827683","https://openalex.org/W2130200371","https://openalex.org/W2600840811","https://openalex.org/W6636703687","https://openalex.org/W6636915900","https://openalex.org/W6637080677","https://openalex.org/W6735430581"],"related_works":["https://openalex.org/W2051304374","https://openalex.org/W4286787697","https://openalex.org/W1505605100","https://openalex.org/W3043769852","https://openalex.org/W3210979406","https://openalex.org/W4308670360","https://openalex.org/W2950721324","https://openalex.org/W4200187525","https://openalex.org/W4230921427","https://openalex.org/W1970688438"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-08-25T07:29:55.448023","created_date":"2025-10-10T00:00:00"}
