{"id":"https://openalex.org/W4392349660","doi":"https://doi.org/10.1007/s44230-024-00062-6","title":"Prediction of RNA Secondary Structure Using Butterfly Optimization Algorithm","display_name":"Prediction of RNA Secondary Structure Using Butterfly Optimization Algorithm","publication_year":2024,"publication_date":"2024-03-02","ids":{"openalex":"https://openalex.org/W4392349660","doi":"https://doi.org/10.1007/s44230-024-00062-6"},"language":"en","primary_location":{"id":"doi:10.1007/s44230-024-00062-6","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s44230-024-00062-6","pdf_url":"https://link.springer.com/content/pdf/10.1007/s44230-024-00062-6.pdf","source":{"id":"https://openalex.org/S4210207486","display_name":"Human-Centric Intelligent Systems","issn_l":"2667-1336","issn":["2667-1336"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Human-Centric Intelligent Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://link.springer.com/content/pdf/10.1007/s44230-024-00062-6.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101216013","display_name":"Sajib Chatterjee","orcid":null},"institutions":[{"id":"https://openalex.org/I124386471","display_name":"Khulna University","ror":"https://ror.org/05pny7s12","country_code":"BD","type":"education","lineage":["https://openalex.org/I124386471"]}],"countries":["BD"],"is_corresponding":true,"raw_author_name":"Sajib Chatterjee","raw_affiliation_strings":["Computer Science and Engineering Discipline, Khulna University, Khulna, 9208, Bangladesh"],"affiliations":[{"raw_affiliation_string":"Computer Science and Engineering Discipline, Khulna University, Khulna, 9208, Bangladesh","institution_ids":["https://openalex.org/I124386471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087025013","display_name":"Rameswar Debnath","orcid":"https://orcid.org/0000-0002-1214-6133"},"institutions":[{"id":"https://openalex.org/I124386471","display_name":"Khulna University","ror":"https://ror.org/05pny7s12","country_code":"BD","type":"education","lineage":["https://openalex.org/I124386471"]}],"countries":["BD"],"is_corresponding":false,"raw_author_name":"Rameswar Debnath","raw_affiliation_strings":["Computer Science and Engineering Discipline, Khulna University, Khulna, 9208, Bangladesh"],"affiliations":[{"raw_affiliation_string":"Computer Science and Engineering Discipline, Khulna University, Khulna, 9208, Bangladesh","institution_ids":["https://openalex.org/I124386471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071555731","display_name":"Sujit Biswas","orcid":"https://orcid.org/0000-0002-6770-9845"},"institutions":[{"id":"https://openalex.org/I157227730","display_name":"University of East London","ror":"https://ror.org/057jrqr44","country_code":"GB","type":"education","lineage":["https://openalex.org/I157227730"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Sujit Biswas","raw_affiliation_strings":["Department of Computer Science and Digital Technology, University of East London, London, UK"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Digital Technology, University of East London, London, UK","institution_ids":["https://openalex.org/I157227730"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019217199","display_name":"Anupam Kumar Bairagi","orcid":"https://orcid.org/0000-0003-1639-1301"},"institutions":[{"id":"https://openalex.org/I124386471","display_name":"Khulna University","ror":"https://ror.org/05pny7s12","country_code":"BD","type":"education","lineage":["https://openalex.org/I124386471"]}],"countries":["BD"],"is_corresponding":false,"raw_author_name":"Anupam Kumar Bairagi","raw_affiliation_strings":["Computer Science and Engineering Discipline, Khulna University, Khulna, 9208, Bangladesh"],"affiliations":[{"raw_affiliation_string":"Computer Science and Engineering Discipline, Khulna University, Khulna, 9208, Bangladesh","institution_ids":["https://openalex.org/I124386471"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5101216013"],"corresponding_institution_ids":["https://openalex.org/I124386471"],"apc_list":null,"apc_paid":null,"fwci":0.7154,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.67991691,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":"4","issue":"2","first_page":"220","last_page":"240"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9876999855041504,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/nucleic-acid-secondary-structure","display_name":"Nucleic acid secondary structure","score":0.6655147671699524},{"id":"https://openalex.org/keywords/protein-secondary-structure","display_name":"Protein secondary structure","score":0.6078218221664429},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5748008489608765},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5599662065505981},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.5446793437004089},{"id":"https://openalex.org/keywords/fitness-function","display_name":"Fitness function","score":0.4786985218524933},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.47768908739089966},{"id":"https://openalex.org/keywords/genetic-algorithm","display_name":"Genetic algorithm","score":0.39346376061439514},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35494470596313477},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.325833261013031},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.31485605239868164},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2579784393310547},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15784811973571777},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09325772523880005}],"concepts":[{"id":"https://openalex.org/C85468374","wikidata":"https://www.wikidata.org/wiki/Q6589957","display_name":"Nucleic acid secondary structure","level":4,"score":0.6655147671699524},{"id":"https://openalex.org/C62614982","wikidata":"https://www.wikidata.org/wiki/Q904984","display_name":"Protein secondary structure","level":2,"score":0.6078218221664429},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5748008489608765},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5599662065505981},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.5446793437004089},{"id":"https://openalex.org/C176066374","wikidata":"https://www.wikidata.org/wiki/Q629118","display_name":"Fitness function","level":3,"score":0.4786985218524933},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.47768908739089966},{"id":"https://openalex.org/C8880873","wikidata":"https://www.wikidata.org/wiki/Q187787","display_name":"Genetic algorithm","level":2,"score":0.39346376061439514},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35494470596313477},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.325833261013031},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.31485605239868164},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2579784393310547},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15784811973571777},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09325772523880005},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/s44230-024-00062-6","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s44230-024-00062-6","pdf_url":"https://link.springer.com/content/pdf/10.1007/s44230-024-00062-6.pdf","source":{"id":"https://openalex.org/S4210207486","display_name":"Human-Centric Intelligent Systems","issn_l":"2667-1336","issn":["2667-1336"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Human-Centric Intelligent Systems","raw_type":"journal-article"},{"id":"pmh:oai:openaccess.city.ac.uk:32701","is_oa":true,"landing_page_url":"https://openaccess.city.ac.uk/view/creators_id/sujit=2Ebiswas.html>","pdf_url":"https://openaccess.city.ac.uk/id/eprint/32701/1/s44230-024-00062-6.pdf","source":{"id":"https://openalex.org/S4306401940","display_name":"City Research Online (City University London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I180825142","host_organization_name":"City, University of London","host_organization_lineage":["https://openalex.org/I180825142"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"PeerReviewed"},{"id":"pmh:oai:doaj.org/article:803a723e8e784712a5fed78d3f508ad4","is_oa":true,"landing_page_url":"https://doaj.org/article/803a723e8e784712a5fed78d3f508ad4","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Human-Centric Intelligent Systems, Vol 4, Iss 2, Pp 220-240 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1007/s44230-024-00062-6","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s44230-024-00062-6","pdf_url":"https://link.springer.com/content/pdf/10.1007/s44230-024-00062-6.pdf","source":{"id":"https://openalex.org/S4210207486","display_name":"Human-Centric Intelligent Systems","issn_l":"2667-1336","issn":["2667-1336"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Human-Centric Intelligent Systems","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Affordable and clean energy","id":"https://metadata.un.org/sdg/7","score":0.8299999833106995}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4392349660.pdf"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W1983297363","https://openalex.org/W1984388417","https://openalex.org/W2017965868","https://openalex.org/W2035123840","https://openalex.org/W2039685559","https://openalex.org/W2076347392","https://openalex.org/W2079645034","https://openalex.org/W2086561953","https://openalex.org/W2102934142","https://openalex.org/W2111976294","https://openalex.org/W2141157874","https://openalex.org/W2158746132","https://openalex.org/W2162224067","https://openalex.org/W2195746424","https://openalex.org/W2551437403","https://openalex.org/W2596355100","https://openalex.org/W2760363018","https://openalex.org/W2790662215","https://openalex.org/W2796986051","https://openalex.org/W2857167338","https://openalex.org/W2888835818","https://openalex.org/W2889083964","https://openalex.org/W3011821959","https://openalex.org/W3021898574","https://openalex.org/W3096996275","https://openalex.org/W3101025102","https://openalex.org/W3126773939","https://openalex.org/W3204096889","https://openalex.org/W3212533323","https://openalex.org/W4200394599","https://openalex.org/W4361223990","https://openalex.org/W4380147812"],"related_works":["https://openalex.org/W3047450301","https://openalex.org/W2558432341","https://openalex.org/W1975806245","https://openalex.org/W2345156963","https://openalex.org/W1971402940","https://openalex.org/W2919479895","https://openalex.org/W2131054067","https://openalex.org/W2106492215","https://openalex.org/W3196523453","https://openalex.org/W2033915845"],"abstract_inverted_index":{"Abstract":[0],"Ribonucleic":[1],"acid":[2],"(RNA)":[3],"structure":[4,20,55,66,76,102,157,190,237],"is":[5,21,32,57,79,111],"vital":[6],"to":[7,10,17,23,46,62,123,134,175,207,222],"its":[8,47],"ability":[9,16],"function":[11,174,182],"within":[12],"the":[13,58,64,80,90,100,109,124,130,151,154,164,177,184,194,209,230],"cell.":[14],"The":[15,105,226],"predict":[18,234],"RNA":[19,53,78,236],"essential":[22],"implementing":[24],"new":[25,178,188],"medications":[26],"and":[27,37,118,137,191],"understanding":[28],"genetic":[29],"illnesses.":[30],"It":[31],"also":[33,170,192],"important":[34],"in":[35,83,141],"synthetic":[36],"computational":[38],"biology.":[39],"All":[40],"these":[41],"functions":[42],"are":[43],"directly":[44],"related":[45],"secondary":[48,54,75,101,156,235],"structure.":[49,180],"Also":[50],"prediction":[51,73,185,210,215],"of":[52,67,71,74,77,103,108,132,153,197],"process":[56],"most":[59],"significant":[60],"step":[61],"determining":[63],"tertiary":[65],"RNA.":[68,104],"On":[69],"account":[70],"this,":[72],"crying":[81],"topic":[82],"bioinformatics.":[84],"In":[85],"this":[86],"research,":[87],"we":[88,127,169,217],"present":[89],"swarm-based":[91],"metaheuristic":[92],"Butterfly":[93],"Optimization":[94],"Algorithm":[95],"(BOA)":[96],"method":[97],"for":[98,150],"predicting":[99],"main":[106],"feather":[107],"BOA":[110,133],"that":[112,229],"it":[113],"can":[114,233],"conduct":[115],"both":[116],"local":[117,138],"global":[119,136,198],"search":[120,139,176],"simultaneously.":[121],"According":[122],"problem":[125],"perspective,":[126],"have":[128,145,202,218],"redesigned":[129],"operators":[131],"perform":[135,208],"operations":[140],"different":[142],"ways.":[143],"We":[144,201],"followed":[146],"a":[147,204],"thermodynamic":[148],"model":[149],"selection":[152],"stable":[155,189],"with":[158],"minimum":[159,165],"Gibbs":[160],"free":[161,166],"energy.":[162],"Predicting":[163],"energy":[167],"value":[168],"developed":[171],"an":[172],"\u201cOptimize\u201d":[173],"optimize":[179],"This":[181],"increases":[183],"efficiency,":[186,216],"creating":[187],"decreases":[193],"time":[195],"complexity":[196],"searching":[199],"procedure.":[200],"used":[203],"public":[205],"dataset":[206],"operation.":[211],"To":[212],"accuse":[213],"our":[214,220],"compared":[219],"outcomes":[221],"existing":[223],"popular":[224],"algorithms.":[225,242],"result":[227],"shows":[228],"proposed":[231],"approach":[232],"better":[238],"than":[239],"other":[240],"state-of-the-art":[241]},"counts_by_year":[{"year":2025,"cited_by_count":3}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}