{"id":"https://openalex.org/W2004591793","doi":"https://doi.org/10.1007/s10791-008-9072-x","title":"Tasks, topics and relevance judging for the TREC Genomics Track: five years of experience evaluating biomedical text information retrieval systems","display_name":"Tasks, topics and relevance judging for the TREC Genomics Track: five years of experience evaluating biomedical text information retrieval systems","publication_year":2008,"publication_date":"2008-10-28","ids":{"openalex":"https://openalex.org/W2004591793","doi":"https://doi.org/10.1007/s10791-008-9072-x","mag":"2004591793"},"language":"en","primary_location":{"id":"doi:10.1007/s10791-008-9072-x","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10791-008-9072-x","pdf_url":null,"source":{"id":"https://openalex.org/S79460864","display_name":"Information Retrieval","issn_l":"1386-4564","issn":["1386-4564","1573-7659"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information Retrieval","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047105644","display_name":"Phoebe M. Roberts","orcid":"https://orcid.org/0009-0002-4007-973X"},"institutions":[{"id":"https://openalex.org/I180857899","display_name":"Pfizer (United States)","ror":"https://ror.org/01xdqrp08","country_code":"US","type":"company","lineage":["https://openalex.org/I180857899"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Phoebe M. Roberts","raw_affiliation_strings":["Pfizer Research Technology Center, 620 Memorial Drive, Cambridge, MA, 02139, USA","Pfizer Research Technology Center, Cambridge, USA 02139"],"affiliations":[{"raw_affiliation_string":"Pfizer Research Technology Center, 620 Memorial Drive, Cambridge, MA, 02139, USA","institution_ids":["https://openalex.org/I180857899"]},{"raw_affiliation_string":"Pfizer Research Technology Center, Cambridge, USA 02139","institution_ids":["https://openalex.org/I180857899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062561557","display_name":"Aaron Cohen","orcid":"https://orcid.org/0000-0002-4610-9912"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aaron M. Cohen","raw_affiliation_strings":["Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health & Science University, 3181 S.W. Sam Jackson Park Road, Mail Code BICC, Portland, OR, 97239-3098, USA","Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health & Science University, Portland, USA 97239-3098"],"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health & Science University, 3181 S.W. Sam Jackson Park Road, Mail Code BICC, Portland, OR, 97239-3098, USA","institution_ids":["https://openalex.org/I165690674"]},{"raw_affiliation_string":"Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health & Science University, Portland, USA 97239-3098","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001422310","display_name":"William Hersh","orcid":"https://orcid.org/0000-0002-4114-5148"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William R. Hersh","raw_affiliation_strings":["Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health & Science University, 3181 S.W. Sam Jackson Park Road, Mail Code BICC, Portland, OR, 97239-3098, USA","Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health & Science University, Portland, USA 97239-3098"],"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health & Science University, 3181 S.W. Sam Jackson Park Road, Mail Code BICC, Portland, OR, 97239-3098, USA","institution_ids":["https://openalex.org/I165690674"]},{"raw_affiliation_string":"Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health & Science University, Portland, USA 97239-3098","institution_ids":["https://openalex.org/I165690674"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5047105644"],"corresponding_institution_ids":["https://openalex.org/I180857899"],"apc_list":null,"apc_paid":null,"fwci":1.1007,"has_fulltext":false,"cited_by_count":30,"citation_normalized_percentile":{"value":0.75897976,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"12","issue":"1","first_page":"81","last_page":"97"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.973800003528595,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9692999720573425,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.7341219186782837},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.689155638217926},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.6870567202568054},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5619633197784424},{"id":"https://openalex.org/keywords/test","display_name":"Test (biology)","score":0.5408918857574463},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.5162432193756104},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.461329847574234},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.46003398299217224},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20320504903793335}],"concepts":[{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.7341219186782837},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.689155638217926},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.6870567202568054},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5619633197784424},{"id":"https://openalex.org/C2777267654","wikidata":"https://www.wikidata.org/wiki/Q3519023","display_name":"Test (biology)","level":2,"score":0.5408918857574463},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.5162432193756104},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.461329847574234},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.46003398299217224},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20320504903793335},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s10791-008-9072-x","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s10791-008-9072-x","pdf_url":null,"source":{"id":"https://openalex.org/S79460864","display_name":"Information Retrieval","issn_l":"1386-4564","issn":["1386-4564","1573-7659"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information Retrieval","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.7799999713897705}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1588755462","https://openalex.org/W1603229901","https://openalex.org/W1817582244","https://openalex.org/W1968848598","https://openalex.org/W1993119069","https://openalex.org/W2006016176","https://openalex.org/W2025672980","https://openalex.org/W2031445920","https://openalex.org/W2031868269","https://openalex.org/W2048623398","https://openalex.org/W2048987619","https://openalex.org/W2086927156","https://openalex.org/W2091898001","https://openalex.org/W2097106271","https://openalex.org/W2103470346","https://openalex.org/W2117966604","https://openalex.org/W2120308175","https://openalex.org/W2121844933","https://openalex.org/W2126276057","https://openalex.org/W2132948308","https://openalex.org/W2159053585","https://openalex.org/W2406362569","https://openalex.org/W2736182440","https://openalex.org/W2791276966","https://openalex.org/W2917293077","https://openalex.org/W2917915395","https://openalex.org/W2977393556","https://openalex.org/W4242661676","https://openalex.org/W6603694148","https://openalex.org/W6678356393"],"related_works":["https://openalex.org/W2032233321","https://openalex.org/W3121970507","https://openalex.org/W2110028391","https://openalex.org/W54497855","https://openalex.org/W217960748","https://openalex.org/W3125814499","https://openalex.org/W2090827041","https://openalex.org/W2094012830","https://openalex.org/W187246281","https://openalex.org/W2910384174"],"abstract_inverted_index":null,"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
