{"id":"https://openalex.org/W42208490","doi":"https://doi.org/10.1007/978-3-642-33636-2_14","title":"Investigating Co-infection Dynamics through Evolution of Bio-PEPA Model Parameters: A Combined Process Algebra and Evolutionary Computing Approach","display_name":"Investigating Co-infection Dynamics through Evolution of Bio-PEPA Model Parameters: A Combined Process Algebra and Evolutionary Computing Approach","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W42208490","doi":"https://doi.org/10.1007/978-3-642-33636-2_14","mag":"42208490"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-33636-2_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-33636-2_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073188602","display_name":"David Marco","orcid":null},"institutions":[{"id":"https://openalex.org/I12093191","display_name":"University of Stirling","ror":"https://ror.org/045wgfr59","country_code":"GB","type":"education","lineage":["https://openalex.org/I12093191"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"David Marco","raw_affiliation_strings":["University of Stirling, Stirling, UK","University of Stirling, Stirling UK"],"affiliations":[{"raw_affiliation_string":"University of Stirling, Stirling, UK","institution_ids":["https://openalex.org/I12093191"]},{"raw_affiliation_string":"University of Stirling, Stirling UK","institution_ids":["https://openalex.org/I12093191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076793818","display_name":"Erin Scott","orcid":"https://orcid.org/0000-0001-7190-1728"},"institutions":[{"id":"https://openalex.org/I12093191","display_name":"University of Stirling","ror":"https://ror.org/045wgfr59","country_code":"GB","type":"education","lineage":["https://openalex.org/I12093191"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Erin Scott","raw_affiliation_strings":["University of Stirling, Stirling, UK","University of Stirling, Stirling UK"],"affiliations":[{"raw_affiliation_string":"University of Stirling, Stirling, UK","institution_ids":["https://openalex.org/I12093191"]},{"raw_affiliation_string":"University of Stirling, Stirling UK","institution_ids":["https://openalex.org/I12093191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103057839","display_name":"David Cairns","orcid":"https://orcid.org/0000-0002-0246-3821"},"institutions":[{"id":"https://openalex.org/I12093191","display_name":"University of Stirling","ror":"https://ror.org/045wgfr59","country_code":"GB","type":"education","lineage":["https://openalex.org/I12093191"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"David Cairns","raw_affiliation_strings":["University of Stirling, Stirling, UK","University of Stirling, Stirling UK"],"affiliations":[{"raw_affiliation_string":"University of Stirling, Stirling, UK","institution_ids":["https://openalex.org/I12093191"]},{"raw_affiliation_string":"University of Stirling, Stirling UK","institution_ids":["https://openalex.org/I12093191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015680502","display_name":"Andrea L. Graham","orcid":"https://orcid.org/0000-0002-6580-2755"},"institutions":[{"id":"https://openalex.org/I20089843","display_name":"Princeton University","ror":"https://ror.org/00hx57361","country_code":"US","type":"education","lineage":["https://openalex.org/I20089843"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrea Graham","raw_affiliation_strings":["Princeton University, Princeton, NJ, 08544, USA","Princeton University Princeton USA"],"affiliations":[{"raw_affiliation_string":"Princeton University, Princeton, NJ, 08544, USA","institution_ids":["https://openalex.org/I20089843"]},{"raw_affiliation_string":"Princeton University Princeton USA","institution_ids":["https://openalex.org/I20089843"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102895300","display_name":"Judith E. Allen","orcid":"https://orcid.org/0000-0002-3829-066X"},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Judi Allen","raw_affiliation_strings":["University of Edinburgh, Edinburgh, UK","University of Edinburgh, Edinburgh , UK"],"affiliations":[{"raw_affiliation_string":"University of Edinburgh, Edinburgh, UK","institution_ids":["https://openalex.org/I98677209"]},{"raw_affiliation_string":"University of Edinburgh, Edinburgh , UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082215356","display_name":"Simmi Mahajan","orcid":null},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Simmi Mahajan","raw_affiliation_strings":["University of Edinburgh, Edinburgh, UK","University of Edinburgh, Edinburgh , UK"],"affiliations":[{"raw_affiliation_string":"University of Edinburgh, Edinburgh, UK","institution_ids":["https://openalex.org/I98677209"]},{"raw_affiliation_string":"University of Edinburgh, Edinburgh , UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060791188","display_name":"Carron Shankland","orcid":"https://orcid.org/0000-0001-7672-2884"},"institutions":[{"id":"https://openalex.org/I12093191","display_name":"University of Stirling","ror":"https://ror.org/045wgfr59","country_code":"GB","type":"education","lineage":["https://openalex.org/I12093191"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Carron Shankland","raw_affiliation_strings":["University of Stirling, Stirling, UK","University of Stirling, Stirling UK"],"affiliations":[{"raw_affiliation_string":"University of Stirling, Stirling, UK","institution_ids":["https://openalex.org/I12093191"]},{"raw_affiliation_string":"University of Stirling, Stirling UK","institution_ids":["https://openalex.org/I12093191"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5073188602"],"corresponding_institution_ids":["https://openalex.org/I12093191"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":2.1538,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.87781683,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"227","last_page":"246"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9915000200271606,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9915000200271606,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.930899977684021,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.6213710308074951},{"id":"https://openalex.org/keywords/process-calculus","display_name":"Process calculus","score":0.6180461049079895},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5884231328964233},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.573573887348175},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.5008797645568848},{"id":"https://openalex.org/keywords/parameter-space","display_name":"Parameter space","score":0.48052486777305603},{"id":"https://openalex.org/keywords/evolutionary-computation","display_name":"Evolutionary computation","score":0.4708383083343506},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.4493284523487091},{"id":"https://openalex.org/keywords/evolutionary-algorithm","display_name":"Evolutionary algorithm","score":0.41242730617523193},{"id":"https://openalex.org/keywords/algebra-over-a-field","display_name":"Algebra over a field","score":0.3378240764141083},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.32152658700942993},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.25553178787231445},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.23856180906295776},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.23674193024635315},{"id":"https://openalex.org/keywords/pure-mathematics","display_name":"Pure mathematics","score":0.10201916098594666},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08166563510894775}],"concepts":[{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.6213710308074951},{"id":"https://openalex.org/C161771561","wikidata":"https://www.wikidata.org/wiki/Q1970286","display_name":"Process calculus","level":2,"score":0.6180461049079895},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5884231328964233},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.573573887348175},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5008797645568848},{"id":"https://openalex.org/C73586568","wikidata":"https://www.wikidata.org/wiki/Q2600211","display_name":"Parameter space","level":2,"score":0.48052486777305603},{"id":"https://openalex.org/C105902424","wikidata":"https://www.wikidata.org/wiki/Q1197129","display_name":"Evolutionary computation","level":2,"score":0.4708383083343506},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.4493284523487091},{"id":"https://openalex.org/C159149176","wikidata":"https://www.wikidata.org/wiki/Q14489129","display_name":"Evolutionary algorithm","level":2,"score":0.41242730617523193},{"id":"https://openalex.org/C136119220","wikidata":"https://www.wikidata.org/wiki/Q1000660","display_name":"Algebra over a field","level":2,"score":0.3378240764141083},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.32152658700942993},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.25553178787231445},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.23856180906295776},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.23674193024635315},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.10201916098594666},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08166563510894775},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-642-33636-2_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-33636-2_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:dspace.stir.ac.uk:1893/22206","is_oa":false,"landing_page_url":"http://hdl.handle.net/1893/22206","pdf_url":null,"source":{"id":"https://openalex.org/S4306400268","display_name":"Stirling Online Research Repository (University of Stirling)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I12093191","host_organization_name":"University of Stirling","host_organization_lineage":["https://openalex.org/I12093191"],"host_organization_lineage_names":[],"type":"repository"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Conference Paper"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W201274257","https://openalex.org/W586395054","https://openalex.org/W1483620038","https://openalex.org/W1497256448","https://openalex.org/W1544529442","https://openalex.org/W1659842140","https://openalex.org/W1983350265","https://openalex.org/W2004132728","https://openalex.org/W2021089599","https://openalex.org/W2026658076","https://openalex.org/W2071224362","https://openalex.org/W2074304536","https://openalex.org/W2078734278","https://openalex.org/W2084282082","https://openalex.org/W2101206446","https://openalex.org/W2110491264","https://openalex.org/W2119396705","https://openalex.org/W2128583517","https://openalex.org/W2145002614","https://openalex.org/W2154601808","https://openalex.org/W2155260680","https://openalex.org/W2155865786","https://openalex.org/W2170484057","https://openalex.org/W2171661751","https://openalex.org/W2182836616","https://openalex.org/W2463089998","https://openalex.org/W2496050832","https://openalex.org/W3011460294","https://openalex.org/W3023540311","https://openalex.org/W3138865660","https://openalex.org/W3150103233","https://openalex.org/W4206542816"],"related_works":["https://openalex.org/W4297582752","https://openalex.org/W4285805405","https://openalex.org/W85101999","https://openalex.org/W2391924736","https://openalex.org/W3133779647","https://openalex.org/W4291270682","https://openalex.org/W1560122427","https://openalex.org/W2593449396","https://openalex.org/W2780789525","https://openalex.org/W2787833928"],"abstract_inverted_index":null,"counts_by_year":[{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
