{"id":"https://openalex.org/W2082430676","doi":"https://doi.org/10.1007/978-3-642-12683-3_6","title":"Subnetwork State Functions Define Dysregulated Subnetworks in Cancer","display_name":"Subnetwork State Functions Define Dysregulated Subnetworks in Cancer","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W2082430676","doi":"https://doi.org/10.1007/978-3-642-12683-3_6","mag":"2082430676"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-12683-3_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-12683-3_6","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110461875","display_name":"Salim A. Chowdhury","orcid":null},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Salim A. Chowdhury","raw_affiliation_strings":["Dept. of Electrical Engineering & Computer Science, Case Western Reserve University, Cleveland, OH, 44106, USA"],"affiliations":[{"raw_affiliation_string":"Dept. of Electrical Engineering & Computer Science, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045950509","display_name":"Rod K. Nibbe","orcid":null},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rod K. Nibbe","raw_affiliation_strings":["Center for Proteomics & Bioinformatics, Case Western Reserve University, Cleveland, OH, 44106, USA","Dept. of Pharmacology, Case Western Reserve University, Cleveland, OH, 44106, USA"],"affiliations":[{"raw_affiliation_string":"Center for Proteomics & Bioinformatics, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Dept. of Pharmacology, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071940002","display_name":"Mark R. Chance","orcid":"https://orcid.org/0000-0002-2991-6405"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark R. Chance","raw_affiliation_strings":["Center for Proteomics & Bioinformatics, Case Western Reserve University, Cleveland, OH, 44106, USA","Dept. of Physiology & Biophysics, Case Western Reserve University, Cleveland, OH, 44106, USA"],"affiliations":[{"raw_affiliation_string":"Center for Proteomics & Bioinformatics, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Dept. of Physiology & Biophysics, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035558591","display_name":"Mehmet Koyut\u00fcrk","orcid":"https://orcid.org/0000-0002-3434-5512"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mehmet Koyut\u00fcrk","raw_affiliation_strings":["Center for Proteomics & Bioinformatics, Case Western Reserve University, Cleveland, OH, 44106, USA","Dept. of Electrical Engineering & Computer Science, Case Western Reserve University, Cleveland, OH, 44106, USA"],"affiliations":[{"raw_affiliation_string":"Center for Proteomics & Bioinformatics, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Dept. of Electrical Engineering & Computer Science, Case Western Reserve University, Cleveland, OH, 44106, USA","institution_ids":["https://openalex.org/I58956616"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5110461875"],"corresponding_institution_ids":["https://openalex.org/I58956616"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":3.3728,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.92599483,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"80","last_page":"95"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/subnetwork","display_name":"Subnetwork","score":0.983026385307312},{"id":"https://openalex.org/keywords/heuristics","display_name":"Heuristics","score":0.7093864679336548},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6802460551261902},{"id":"https://openalex.org/keywords/greedy-algorithm","display_name":"Greedy algorithm","score":0.5579156279563904},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4474315345287323},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.39811939001083374},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.38299745321273804},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.241607666015625},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.19112443923950195},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.09451344609260559}],"concepts":[{"id":"https://openalex.org/C2780186347","wikidata":"https://www.wikidata.org/wiki/Q11414","display_name":"Subnetwork","level":2,"score":0.983026385307312},{"id":"https://openalex.org/C127705205","wikidata":"https://www.wikidata.org/wiki/Q5748245","display_name":"Heuristics","level":2,"score":0.7093864679336548},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6802460551261902},{"id":"https://openalex.org/C51823790","wikidata":"https://www.wikidata.org/wiki/Q504353","display_name":"Greedy algorithm","level":2,"score":0.5579156279563904},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4474315345287323},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39811939001083374},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.38299745321273804},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.241607666015625},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.19112443923950195},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.09451344609260559},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-642-12683-3_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-12683-3_6","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.421.8748","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.421.8748","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://engr.case.edu/koyuturk_mehmet/publications/crane_recomb10.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W193575463","https://openalex.org/W1535333477","https://openalex.org/W1601808953","https://openalex.org/W1995494073","https://openalex.org/W2008353852","https://openalex.org/W2011356131","https://openalex.org/W2023931764","https://openalex.org/W2028561804","https://openalex.org/W2032373323","https://openalex.org/W2043904301","https://openalex.org/W2056956799","https://openalex.org/W2066580949","https://openalex.org/W2070412833","https://openalex.org/W2074395112","https://openalex.org/W2079829409","https://openalex.org/W2082430676","https://openalex.org/W2083045667","https://openalex.org/W2095692554","https://openalex.org/W2099321136","https://openalex.org/W2100025044","https://openalex.org/W2100850281","https://openalex.org/W2102000647","https://openalex.org/W2104261859","https://openalex.org/W2108022229","https://openalex.org/W2112811019","https://openalex.org/W2117007075","https://openalex.org/W2117555142","https://openalex.org/W2128036243","https://openalex.org/W2133111499","https://openalex.org/W2135306061","https://openalex.org/W2145290999","https://openalex.org/W2151041575","https://openalex.org/W2154452346","https://openalex.org/W2154947819","https://openalex.org/W2158973107","https://openalex.org/W2169576771"],"related_works":["https://openalex.org/W4387497383","https://openalex.org/W3183948672","https://openalex.org/W3173606202","https://openalex.org/W3110381201","https://openalex.org/W2948807893","https://openalex.org/W2935909890","https://openalex.org/W2778153218","https://openalex.org/W2758277628","https://openalex.org/W1531601525","https://openalex.org/W3119129187"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
