{"id":"https://openalex.org/W2139504329","doi":"https://doi.org/10.1007/978-3-540-25974-9_14","title":"The Biochemical Abstract Machine BIOCHAM","display_name":"The Biochemical Abstract Machine BIOCHAM","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W2139504329","doi":"https://doi.org/10.1007/978-3-540-25974-9_14","mag":"2139504329"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-25974-9_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-25974-9_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://inria.hal.science/inria-00000814","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030774373","display_name":"Nathalie Chabrier-Rivier","orcid":null},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Nathalie Chabrier-Rivier","raw_affiliation_strings":["Projet Contraintes, INRIA Rocquencourt, BP105, 78153 Cedex, Le Chesnay, France"],"affiliations":[{"raw_affiliation_string":"Projet Contraintes, INRIA Rocquencourt, BP105, 78153 Cedex, Le Chesnay, France","institution_ids":["https://openalex.org/I1326498283"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000983836","display_name":"Fran\u00e7ois Fages","orcid":"https://orcid.org/0000-0001-5650-8266"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Fran\u00e7ois Fages","raw_affiliation_strings":["Projet Contraintes, INRIA Rocquencourt, BP105, 78153 Cedex, Le Chesnay, France"],"affiliations":[{"raw_affiliation_string":"Projet Contraintes, INRIA Rocquencourt, BP105, 78153 Cedex, Le Chesnay, France","institution_ids":["https://openalex.org/I1326498283"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003525513","display_name":"Sylvain Soliman","orcid":"https://orcid.org/0000-0001-5525-7418"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Sylvain Soliman","raw_affiliation_strings":["Projet Contraintes, INRIA Rocquencourt, BP105, 78153 Cedex, Le Chesnay, France"],"affiliations":[{"raw_affiliation_string":"Projet Contraintes, INRIA Rocquencourt, BP105, 78153 Cedex, Le Chesnay, France","institution_ids":["https://openalex.org/I1326498283"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5030774373"],"corresponding_institution_ids":["https://openalex.org/I1326498283"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":16.3589,"has_fulltext":false,"cited_by_count":78,"citation_normalized_percentile":{"value":0.99171202,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"172","last_page":"191"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8417510986328125},{"id":"https://openalex.org/keywords/semantics","display_name":"Semantics (computer science)","score":0.6185181140899658},{"id":"https://openalex.org/keywords/equivalence","display_name":"Equivalence (formal languages)","score":0.6025719046592712},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.5048571228981018},{"id":"https://openalex.org/keywords/formal-semantics","display_name":"Formal semantics (linguistics)","score":0.4755021035671234},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4424106478691101},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.4398180842399597},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.42165136337280273}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8417510986328125},{"id":"https://openalex.org/C184337299","wikidata":"https://www.wikidata.org/wiki/Q1437428","display_name":"Semantics (computer science)","level":2,"score":0.6185181140899658},{"id":"https://openalex.org/C2780069185","wikidata":"https://www.wikidata.org/wiki/Q7977945","display_name":"Equivalence (formal languages)","level":2,"score":0.6025719046592712},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.5048571228981018},{"id":"https://openalex.org/C146499914","wikidata":"https://www.wikidata.org/wiki/Q5469969","display_name":"Formal semantics (linguistics)","level":2,"score":0.4755021035671234},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4424106478691101},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.4398180842399597},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.42165136337280273},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-540-25974-9_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-25974-9_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.220.6421","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.220.6421","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://hal.inria.fr/docs/00/04/46/42/PDF/CFS04cmsb.pdf","raw_type":"text"},{"id":"pmh:oai:HAL:inria-00000814v1","is_oa":true,"landing_page_url":"https://inria.hal.science/inria-00000814","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"{CMSB'04}: Proceedings of the second Workshop on Computational Methods in Systems Biology, 2004, Paris, pp.172--191","raw_type":"Conference papers"}],"best_oa_location":{"id":"pmh:oai:HAL:inria-00000814v1","is_oa":true,"landing_page_url":"https://inria.hal.science/inria-00000814","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"{CMSB'04}: Proceedings of the second Workshop on Computational Methods in Systems Biology, 2004, Paris, pp.172--191","raw_type":"Conference papers"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land","score":0.4399999976158142}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W1489391022","https://openalex.org/W1522448884","https://openalex.org/W1532361198","https://openalex.org/W1535220465","https://openalex.org/W1540051489","https://openalex.org/W1563476066","https://openalex.org/W1813788325","https://openalex.org/W1874468149","https://openalex.org/W1915846365","https://openalex.org/W1975954590","https://openalex.org/W1999866856","https://openalex.org/W2007006124","https://openalex.org/W2066322491","https://openalex.org/W2081556416","https://openalex.org/W2094159326","https://openalex.org/W2096248361","https://openalex.org/W2108723074","https://openalex.org/W2109975391","https://openalex.org/W2112651905","https://openalex.org/W2119831128","https://openalex.org/W2133401281","https://openalex.org/W2150908245","https://openalex.org/W2159482845","https://openalex.org/W2340735175","https://openalex.org/W2612793397","https://openalex.org/W2913459036","https://openalex.org/W4232911573","https://openalex.org/W4233304250","https://openalex.org/W4255845473","https://openalex.org/W4285719527","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2162604396","https://openalex.org/W2362341649","https://openalex.org/W4324054641","https://openalex.org/W2146445117","https://openalex.org/W3007870257","https://openalex.org/W1495012123","https://openalex.org/W2387088991","https://openalex.org/W2051867508","https://openalex.org/W148613377","https://openalex.org/W2562904493"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":4}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
