{"id":"https://openalex.org/W2794733088","doi":"https://doi.org/10.1007/978-3-319-89929-9_12","title":"A Nested 2-Level Cross-Validation Ensemble Learning Pipeline Suggests a Negative Pressure Against Crosstalk snoRNA-mRNA Interactions in Saccharomyces Cerevisae","display_name":"A Nested 2-Level Cross-Validation Ensemble Learning Pipeline Suggests a Negative Pressure Against Crosstalk snoRNA-mRNA Interactions in Saccharomyces Cerevisae","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2794733088","doi":"https://doi.org/10.1007/978-3-319-89929-9_12","mag":"2794733088"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-89929-9_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-89929-9_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073970469","display_name":"Antoine Soul\u00e9","orcid":"https://orcid.org/0000-0003-4810-4821"},"institutions":[{"id":"https://openalex.org/I4210139461","display_name":"Laboratoire d'Informatique de l'\u00c9cole Polytechnique","ror":"https://ror.org/04afed728","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I142476485","https://openalex.org/I4210139461","https://openalex.org/I4210145102","https://openalex.org/I4210159245"]},{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA","FR"],"is_corresponding":true,"raw_author_name":"Antoine Soul\u00e9","raw_affiliation_strings":["LIX - UMR 7161, \u00c9cole Polytechnique, Palaiseau, France","School of Computer Science, McGill University, Montr\u00e9al, Canada"],"raw_orcid":"https://orcid.org/0000-0003-4810-4821","affiliations":[{"raw_affiliation_string":"LIX - UMR 7161, \u00c9cole Polytechnique, Palaiseau, France","institution_ids":["https://openalex.org/I4210139461"]},{"raw_affiliation_string":"School of Computer Science, McGill University, Montr\u00e9al, Canada","institution_ids":["https://openalex.org/I5023651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103801575","display_name":"Jean\u2010Marc Steyaert","orcid":null},"institutions":[{"id":"https://openalex.org/I4210139461","display_name":"Laboratoire d'Informatique de l'\u00c9cole Polytechnique","ror":"https://ror.org/04afed728","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I142476485","https://openalex.org/I4210139461","https://openalex.org/I4210145102","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean-Marc Steyaert","raw_affiliation_strings":["LIX - UMR 7161, \u00c9cole Polytechnique, Palaiseau, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LIX - UMR 7161, \u00c9cole Polytechnique, Palaiseau, France","institution_ids":["https://openalex.org/I4210139461"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000881484","display_name":"J\u00e9r\u00f4me Waldisp\u00fchl","orcid":"https://orcid.org/0000-0002-2561-7117"},"institutions":[{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"J\u00e9r\u00f4me Waldisp\u00fchl","raw_affiliation_strings":["School of Computer Science, McGill University, Montr\u00e9al, Canada"],"raw_orcid":"https://orcid.org/0000-0002-2561-7117","affiliations":[{"raw_affiliation_string":"School of Computer Science, McGill University, Montr\u00e9al, Canada","institution_ids":["https://openalex.org/I5023651"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5073970469"],"corresponding_institution_ids":["https://openalex.org/I4210139461","https://openalex.org/I5023651"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.04238488,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"177","last_page":"193"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/crosstalk","display_name":"Crosstalk","score":0.7247854471206665},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.7164011001586914},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6098505258560181},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5801564455032349},{"id":"https://openalex.org/keywords/non-coding-rna","display_name":"Non-coding RNA","score":0.5601497292518616},{"id":"https://openalex.org/keywords/small-nucleolar-rna","display_name":"Small nucleolar RNA","score":0.5416294932365417},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.4957326352596283},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.37844744324684143},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.37722742557525635},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3629120886325836},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.08429613709449768}],"concepts":[{"id":"https://openalex.org/C169822122","wikidata":"https://www.wikidata.org/wiki/Q230187","display_name":"Crosstalk","level":2,"score":0.7247854471206665},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.7164011001586914},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6098505258560181},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5801564455032349},{"id":"https://openalex.org/C194993378","wikidata":"https://www.wikidata.org/wiki/Q427087","display_name":"Non-coding RNA","level":4,"score":0.5601497292518616},{"id":"https://openalex.org/C179255354","wikidata":"https://www.wikidata.org/wiki/Q284416","display_name":"Small nucleolar RNA","level":5,"score":0.5416294932365417},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.4957326352596283},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.37844744324684143},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.37722742557525635},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3629120886325836},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.08429613709449768},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-319-89929-9_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-89929-9_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:HAL:hal-04466141v1","is_oa":false,"landing_page_url":"https://hal.science/hal-04466141","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"RECOMB 2018 - 22nd International Conference on Research in Computational Molecular Biology, 2018, Paris, France. pp.177-193, ⟨10.1007/978-3-319-89929-9_12⟩","raw_type":"Conference papers"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W1480376833","https://openalex.org/W1484558856","https://openalex.org/W1531414226","https://openalex.org/W2046374424","https://openalex.org/W2075676541","https://openalex.org/W2098508116","https://openalex.org/W2101234009","https://openalex.org/W2117391818","https://openalex.org/W2119340328","https://openalex.org/W2144671815","https://openalex.org/W2144723744","https://openalex.org/W2145319716","https://openalex.org/W2150882562","https://openalex.org/W2154531880","https://openalex.org/W2341424800","https://openalex.org/W2363081453","https://openalex.org/W2383534773","https://openalex.org/W2463369936","https://openalex.org/W2565865891","https://openalex.org/W2734378550","https://openalex.org/W2787894218","https://openalex.org/W2952333148","https://openalex.org/W6675354045"],"related_works":["https://openalex.org/W4242611624","https://openalex.org/W2547129954","https://openalex.org/W2890134923","https://openalex.org/W2095206021","https://openalex.org/W3144341322","https://openalex.org/W2158875805","https://openalex.org/W2145052031","https://openalex.org/W2075676541","https://openalex.org/W4317612483","https://openalex.org/W3005149796"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-05-07T13:39:58.223016","created_date":"2025-10-10T00:00:00"}