{"id":"https://openalex.org/W4413300420","doi":"https://doi.org/10.1007/978-3-032-01436-8_14","title":"Decoding Gene Regulation in\u00a0Alzheimer\u2019s Disease with\u00a0Transfer Learning and\u00a0Explainable Machine Learning","display_name":"Decoding Gene Regulation in\u00a0Alzheimer\u2019s Disease with\u00a0Transfer Learning and\u00a0Explainable Machine Learning","publication_year":2025,"publication_date":"2025-08-18","ids":{"openalex":"https://openalex.org/W4413300420","doi":"https://doi.org/10.1007/978-3-032-01436-8_14"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-032-01436-8_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-032-01436-8_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002927216","display_name":"Sergio Peignier","orcid":"https://orcid.org/0000-0002-9004-3033"},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I48430043","display_name":"Institut National des Sciences Appliqu\u00e9es de Lyon","ror":"https://ror.org/050jn9y42","country_code":"FR","type":"education","lineage":["https://openalex.org/I203339264","https://openalex.org/I48430043"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Sergio Peignier","raw_affiliation_strings":["INSA Lyon, INRAE, BF2I, UMR0203, 69621, Villeurbanne, France"],"affiliations":[{"raw_affiliation_string":"INSA Lyon, INRAE, BF2I, UMR0203, 69621, Villeurbanne, France","institution_ids":["https://openalex.org/I48430043","https://openalex.org/I4210088668"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112393656","display_name":"A.L. Rooijen van","orcid":"https://orcid.org/0000-0001-9607-3500"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I48430043","display_name":"Institut National des Sciences Appliqu\u00e9es de Lyon","ror":"https://ror.org/050jn9y42","country_code":"FR","type":"education","lineage":["https://openalex.org/I203339264","https://openalex.org/I48430043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Amanda Lo Van","raw_affiliation_strings":["INSA Lyon, CNRS, LaMCoS, UMR5259, 69621, Villeurbanne, France"],"affiliations":[{"raw_affiliation_string":"INSA Lyon, CNRS, LaMCoS, UMR5259, 69621, Villeurbanne, France","institution_ids":["https://openalex.org/I48430043","https://openalex.org/I100532134","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5119339672","display_name":"Yann Meunier","orcid":null},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I48430043","display_name":"Institut National des Sciences Appliqu\u00e9es de Lyon","ror":"https://ror.org/050jn9y42","country_code":"FR","type":"education","lineage":["https://openalex.org/I203339264","https://openalex.org/I48430043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Yann Meunier","raw_affiliation_strings":["INSA Lyon, INRAE, BF2I, UMR0203, 69621, Villeurbanne, France"],"affiliations":[{"raw_affiliation_string":"INSA Lyon, INRAE, BF2I, UMR0203, 69621, Villeurbanne, France","institution_ids":["https://openalex.org/I48430043","https://openalex.org/I4210088668"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5119339673","display_name":"Elea Pauliat","orcid":null},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I48430043","display_name":"Institut National des Sciences Appliqu\u00e9es de Lyon","ror":"https://ror.org/050jn9y42","country_code":"FR","type":"education","lineage":["https://openalex.org/I203339264","https://openalex.org/I48430043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Elea Pauliat","raw_affiliation_strings":["INSA Lyon, INRAE, BF2I, UMR0203, 69621, Villeurbanne, France"],"affiliations":[{"raw_affiliation_string":"INSA Lyon, INRAE, BF2I, UMR0203, 69621, Villeurbanne, France","institution_ids":["https://openalex.org/I48430043","https://openalex.org/I4210088668"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5119339674","display_name":"Matis Zouari","orcid":null},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I48430043","display_name":"Institut National des Sciences Appliqu\u00e9es de Lyon","ror":"https://ror.org/050jn9y42","country_code":"FR","type":"education","lineage":["https://openalex.org/I203339264","https://openalex.org/I48430043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Matis Zouari","raw_affiliation_strings":["INSA Lyon, INRAE, BF2I, UMR0203, 69621, Villeurbanne, France"],"affiliations":[{"raw_affiliation_string":"INSA Lyon, INRAE, BF2I, UMR0203, 69621, Villeurbanne, France","institution_ids":["https://openalex.org/I48430043","https://openalex.org/I4210088668"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051838896","display_name":"Federica Calevro","orcid":"https://orcid.org/0000-0001-7856-9617"},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I48430043","display_name":"Institut National des Sciences Appliqu\u00e9es de Lyon","ror":"https://ror.org/050jn9y42","country_code":"FR","type":"education","lineage":["https://openalex.org/I203339264","https://openalex.org/I48430043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Federica Calevro","raw_affiliation_strings":["INSA Lyon, INRAE, BF2I, UMR0203, 69621, Villeurbanne, France"],"affiliations":[{"raw_affiliation_string":"INSA Lyon, INRAE, BF2I, UMR0203, 69621, Villeurbanne, France","institution_ids":["https://openalex.org/I48430043","https://openalex.org/I4210088668"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5002927216"],"corresponding_institution_ids":["https://openalex.org/I4210088668","https://openalex.org/I48430043"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.37231732,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"258","last_page":"275"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9837999939918518,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12026","display_name":"Explainable Artificial Intelligence (XAI)","score":0.9825999736785889,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8040479421615601},{"id":"https://openalex.org/keywords/decoding-methods","display_name":"Decoding methods","score":0.7506384253501892},{"id":"https://openalex.org/keywords/transfer-of-learning","display_name":"Transfer of learning","score":0.6154224276542664},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4703505337238312},{"id":"https://openalex.org/keywords/gene-transfer","display_name":"Gene transfer","score":0.4202749729156494},{"id":"https://openalex.org/keywords/cognitive-science","display_name":"Cognitive science","score":0.33058178424835205},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1815546452999115},{"id":"https://openalex.org/keywords/telecommunications","display_name":"Telecommunications","score":0.09024256467819214},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.08410987257957458},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.06051957607269287}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8040479421615601},{"id":"https://openalex.org/C57273362","wikidata":"https://www.wikidata.org/wiki/Q576722","display_name":"Decoding methods","level":2,"score":0.7506384253501892},{"id":"https://openalex.org/C150899416","wikidata":"https://www.wikidata.org/wiki/Q1820378","display_name":"Transfer of learning","level":2,"score":0.6154224276542664},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4703505337238312},{"id":"https://openalex.org/C3018928802","wikidata":"https://www.wikidata.org/wiki/Q83185","display_name":"Gene transfer","level":3,"score":0.4202749729156494},{"id":"https://openalex.org/C188147891","wikidata":"https://www.wikidata.org/wiki/Q147638","display_name":"Cognitive science","level":1,"score":0.33058178424835205},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1815546452999115},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.09024256467819214},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.08410987257957458},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.06051957607269287},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-032-01436-8_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-032-01436-8_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:HAL:hal-05255057v1","is_oa":false,"landing_page_url":"https://hal.science/hal-05255057","pdf_url":null,"source":{"id":"https://openalex.org/S4406922461","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Computational Methods in Systems Biology. CMSB 2025., Sep 2025, Lyon, France. &#x27E8;10.1007/978-3-032-01436-8_14&#x27E9;","raw_type":"Conference papers"},{"id":"pmh:oai:HAL:hal-05418773v1","is_oa":false,"landing_page_url":"https://hal.science/hal-05418773","pdf_url":null,"source":{"id":"https://openalex.org/S4406922461","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"International Conference on Computational Methods in Systems Biology, Sep 2025, Villeurbanne, France. pp.258-275, &#x27E8;10.1007/978-3-032-01436-8_14&#x27E9;","raw_type":"Conference papers"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.49000000953674316,"display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W1728842521","https://openalex.org/W1965372971","https://openalex.org/W1981274981","https://openalex.org/W2047940964","https://openalex.org/W2109384743","https://openalex.org/W2111035623","https://openalex.org/W2130410032","https://openalex.org/W2148944713","https://openalex.org/W2150730731","https://openalex.org/W2158215064","https://openalex.org/W2165612785","https://openalex.org/W2337275183","https://openalex.org/W2395579298","https://openalex.org/W2522422641","https://openalex.org/W2616922646","https://openalex.org/W2765284830","https://openalex.org/W2767787249","https://openalex.org/W2800392236","https://openalex.org/W2889326414","https://openalex.org/W2907694952","https://openalex.org/W2943149722","https://openalex.org/W2949505158","https://openalex.org/W2951506174","https://openalex.org/W2951638683","https://openalex.org/W2963095307","https://openalex.org/W2980441388","https://openalex.org/W3007853567","https://openalex.org/W3024161231","https://openalex.org/W3083855890","https://openalex.org/W3128363678","https://openalex.org/W3177060935","https://openalex.org/W3207628929","https://openalex.org/W4211208097","https://openalex.org/W4235875658","https://openalex.org/W4291000683","https://openalex.org/W4293066958","https://openalex.org/W4307034884","https://openalex.org/W4309674289","https://openalex.org/W4311404181","https://openalex.org/W4312020017","https://openalex.org/W4316926719","https://openalex.org/W4317609705","https://openalex.org/W4324143648","https://openalex.org/W4367602258","https://openalex.org/W4378838672","https://openalex.org/W4380989965","https://openalex.org/W4387043384"],"related_works":["https://openalex.org/W2161474341","https://openalex.org/W4302615923","https://openalex.org/W3203142394","https://openalex.org/W2351061015","https://openalex.org/W4220731478","https://openalex.org/W1974101135","https://openalex.org/W2017509870","https://openalex.org/W4251141768","https://openalex.org/W4360952157","https://openalex.org/W2153647085"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-04-24T08:23:43.765630","created_date":"2025-10-10T00:00:00"}
