{"id":"https://openalex.org/W3035587886","doi":"https://doi.org/10.1007/978-3-030-50743-5_17","title":"Scaling Genomics Data Processing with Memory-Driven Computing to Accelerate Computational Biology","display_name":"Scaling Genomics Data Processing with Memory-Driven Computing to Accelerate Computational Biology","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3035587886","doi":"https://doi.org/10.1007/978-3-030-50743-5_17","mag":"3035587886"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-50743-5_17","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-030-50743-5_17","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-50743-5_17.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-50743-5_17.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063916697","display_name":"Matthias Becker","orcid":"https://orcid.org/0000-0002-7120-4508"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]},{"id":"https://openalex.org/I2801533059","display_name":"German Center for Neurodegenerative Diseases","ror":"https://ror.org/043j0f473","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I2801533059","https://openalex.org/I4405256427"]},{"id":"https://openalex.org/I87890613","display_name":"Epigenomics (Germany)","ror":"https://ror.org/0490dah44","country_code":"DE","type":"company","lineage":["https://openalex.org/I87890613"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Matthias Becker","raw_affiliation_strings":["PRECISE, Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases (DZNE) and the University of Bonn, Bonn, Germany"],"affiliations":[{"raw_affiliation_string":"PRECISE, Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases (DZNE) and the University of Bonn, Bonn, Germany","institution_ids":["https://openalex.org/I2801533059","https://openalex.org/I87890613","https://openalex.org/I135140700"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016656910","display_name":"Umesh Worlikar","orcid":null},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]},{"id":"https://openalex.org/I2801533059","display_name":"German Center for Neurodegenerative Diseases","ror":"https://ror.org/043j0f473","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I2801533059","https://openalex.org/I4405256427"]},{"id":"https://openalex.org/I87890613","display_name":"Epigenomics (Germany)","ror":"https://ror.org/0490dah44","country_code":"DE","type":"company","lineage":["https://openalex.org/I87890613"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Umesh Worlikar","raw_affiliation_strings":["PRECISE, Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases (DZNE) and the University of Bonn, Bonn, Germany"],"affiliations":[{"raw_affiliation_string":"PRECISE, Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases (DZNE) and the University of Bonn, Bonn, Germany","institution_ids":["https://openalex.org/I2801533059","https://openalex.org/I87890613","https://openalex.org/I135140700"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005631780","display_name":"Shobhit Agrawal","orcid":null},"institutions":[{"id":"https://openalex.org/I4210162426","display_name":"West German Broadcasting Cologne","ror":"https://ror.org/05s31q962","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210162426"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Shobhit Agrawal","raw_affiliation_strings":["West German Genome Center (WGGC), Bonn, Germany"],"affiliations":[{"raw_affiliation_string":"West German Genome Center (WGGC), Bonn, Germany","institution_ids":["https://openalex.org/I4210162426"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073557750","display_name":"Hartmut Schultze","orcid":"https://orcid.org/0000-0001-5008-7851"},"institutions":[{"id":"https://openalex.org/I4210157003","display_name":"Hewlett-Packard (Germany)","ror":"https://ror.org/04pb97k73","country_code":"DE","type":"company","lineage":["https://openalex.org/I1324840837","https://openalex.org/I4210157003"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Hartmut Schultze","raw_affiliation_strings":["Hewlett Packard Enterprise, Ratingen, Germany"],"affiliations":[{"raw_affiliation_string":"Hewlett Packard Enterprise, Ratingen, Germany","institution_ids":["https://openalex.org/I4210157003"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007372940","display_name":"Thomas Ulas","orcid":"https://orcid.org/0000-0002-9785-4197"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thomas Ulas","raw_affiliation_strings":["Genomics and Immunoregulation, LIMES Institute, University of Bonn, Bonn, Germany"],"affiliations":[{"raw_affiliation_string":"Genomics and Immunoregulation, LIMES Institute, University of Bonn, Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036229014","display_name":"Sharad Singhal","orcid":"https://orcid.org/0000-0002-3650-7570"},"institutions":[{"id":"https://openalex.org/I1324840837","display_name":"Hewlett-Packard (United States)","ror":"https://ror.org/059rn9488","country_code":"US","type":"company","lineage":["https://openalex.org/I1324840837"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sharad Singhal","raw_affiliation_strings":["Hewlett Packard Labs, Palo Alto, USA"],"affiliations":[{"raw_affiliation_string":"Hewlett Packard Labs, Palo Alto, USA","institution_ids":["https://openalex.org/I1324840837"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073445890","display_name":"Joachim L. Schultze","orcid":"https://orcid.org/0000-0003-2812-9853"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]},{"id":"https://openalex.org/I2801533059","display_name":"German Center for Neurodegenerative Diseases","ror":"https://ror.org/043j0f473","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I2801533059","https://openalex.org/I4405256427"]},{"id":"https://openalex.org/I87890613","display_name":"Epigenomics (Germany)","ror":"https://ror.org/0490dah44","country_code":"DE","type":"company","lineage":["https://openalex.org/I87890613"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Joachim L. Schultze","raw_affiliation_strings":["Genomics and Immunoregulation, LIMES Institute, University of Bonn, Bonn, Germany","PRECISE, Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases (DZNE) and the University of Bonn, Bonn, Germany"],"affiliations":[{"raw_affiliation_string":"Genomics and Immunoregulation, LIMES Institute, University of Bonn, Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]},{"raw_affiliation_string":"PRECISE, Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases (DZNE) and the University of Bonn, Bonn, Germany","institution_ids":["https://openalex.org/I2801533059","https://openalex.org/I87890613","https://openalex.org/I135140700"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5063916697"],"corresponding_institution_ids":["https://openalex.org/I135140700","https://openalex.org/I2801533059","https://openalex.org/I87890613"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":{"value":5000,"currency":"EUR","value_usd":5392},"fwci":1.65,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.86261931,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"328","last_page":"344"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10502","display_name":"Advanced Memory and Neural Computing","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8249002695083618},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.7292219400405884},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.7033290266990662},{"id":"https://openalex.org/keywords/data-processing","display_name":"Data processing","score":0.5305094122886658},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5052390694618225},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.48348551988601685},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.46293917298316956},{"id":"https://openalex.org/keywords/architecture","display_name":"Architecture","score":0.46264421939849854},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.43226349353790283},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.3777235746383667},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3204633593559265},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2714698910713196},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.1258775293827057},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.11043781042098999}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8249002695083618},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.7292219400405884},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.7033290266990662},{"id":"https://openalex.org/C138827492","wikidata":"https://www.wikidata.org/wiki/Q6661985","display_name":"Data processing","level":2,"score":0.5305094122886658},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5052390694618225},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.48348551988601685},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.46293917298316956},{"id":"https://openalex.org/C123657996","wikidata":"https://www.wikidata.org/wiki/Q12271","display_name":"Architecture","level":2,"score":0.46264421939849854},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.43226349353790283},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.3777235746383667},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3204633593559265},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2714698910713196},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.1258775293827057},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.11043781042098999},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-030-50743-5_17","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-030-50743-5_17","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-50743-5_17.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:pub.dzne.de:164465","is_oa":true,"landing_page_url":"https://pub.dzne.de/search?p=id:%22DZNE-2022-01017%22","pdf_url":null,"source":{"id":"https://openalex.org/S7407051172","display_name":"DZNE Pub","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Cham : Springer International Publishing, Lecture Notes in Computer Science 12151, 328 - 344 (2020). doi:10.1007/978-3-030-50743-5_17","raw_type":"info:eu-repo/semantics/conferenceObject"},{"id":"pmh:oai:pubmedcentral.nih.gov:7295347","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7295347","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"High Performance Computing","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1007/978-3-030-50743-5_17","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-030-50743-5_17","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-50743-5_17.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.6399999856948853,"display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G4254646614","display_name":null,"funder_award_id":"EXC2151/1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G5106512922","display_name":null,"funder_award_id":"Deutsche Forschungsgemeinschaft (DFG","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G7048034171","display_name":null,"funder_award_id":"EXC2151","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G7366511954","display_name":null,"funder_award_id":"EXC215","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G8796401741","display_name":null,"funder_award_id":"390873048","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320323803","display_name":"Bundesministerium f\u00fcr Wirtschaft und Energie","ror":"https://ror.org/02vgg2808"},{"id":"https://openalex.org/F4320324900","display_name":"Rheinische Friedrich-Wilhelms-Universit\u00e4t Bonn","ror":"https://ror.org/041nas322"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3035587886.pdf","grobid_xml":"https://content.openalex.org/works/W3035587886.grobid-xml"},"referenced_works_count":26,"referenced_works":["https://openalex.org/W1978307270","https://openalex.org/W2015831381","https://openalex.org/W2073773982","https://openalex.org/W2078137047","https://openalex.org/W2108234281","https://openalex.org/W2110417468","https://openalex.org/W2128505445","https://openalex.org/W2162651880","https://openalex.org/W2201638556","https://openalex.org/W2325681100","https://openalex.org/W2397388657","https://openalex.org/W2560228154","https://openalex.org/W2578086778","https://openalex.org/W2595507424","https://openalex.org/W2766890412","https://openalex.org/W2788559611","https://openalex.org/W2901011101","https://openalex.org/W2927507212","https://openalex.org/W2949499968","https://openalex.org/W2952191974","https://openalex.org/W2952956051","https://openalex.org/W2964849163","https://openalex.org/W3004467901","https://openalex.org/W3013605959","https://openalex.org/W3103269557","https://openalex.org/W4234326425"],"related_works":["https://openalex.org/W17155033","https://openalex.org/W3207760230","https://openalex.org/W1496222301","https://openalex.org/W1590307681","https://openalex.org/W4312814274","https://openalex.org/W4285370786","https://openalex.org/W2296488620","https://openalex.org/W2358353312","https://openalex.org/W2353836703","https://openalex.org/W41015297"],"abstract_inverted_index":{"Abstract":[0],"Research":[1],"is":[2,59],"increasingly":[3],"becoming":[4],"data-driven,":[5],"and":[6,16,30,95,118],"natural":[7],"sciences":[8],"are":[9,19],"not":[10,42],"an":[11,21],"exception.":[12],"In":[13,64,103],"both":[14],"biology":[15],"medicine,":[17],"we":[18,67,105,128],"observing":[20],"exponential":[22],"growth":[23],"of":[24,71,134,140],"structured":[25],"data":[26,48,58,93,113,145],"collections":[27],"from":[28],"experiments":[29],"population":[31],"studies,":[32],"enabling":[33],"us":[34],"to":[35,122],"gain":[36],"novel":[37,73,125],"insights":[38],"that":[39,87],"would":[40],"otherwise":[41],"be":[43,116],"possible.":[44],"However,":[45],"these":[46],"growing":[47,92],"sets":[49],"pose":[50],"a":[51,72,84,97,108],"challenge":[52],"for":[53,91,100,111],"existing":[54],"compute":[55],"infrastructures":[56],"since":[57],"outgrowing":[60],"limits":[61],"within":[62],"compute.":[63],"this":[65,124],"work,":[66],"present":[68],"the":[69,79,131],"application":[70,119],"approach,":[74],"Memory-Driven":[75],"Computing":[76],"(MDC),":[77],"in":[78,143],"life":[80],"sciences.":[81],"MDC":[82],"proposes":[83],"data-centric":[85],"approach":[86],"has":[88],"been":[89],"designed":[90],"sizes":[94],"provides":[96],"composable":[98],"infrastructure":[99],"changing":[101],"workloads.":[102],"particular,":[104],"show":[106],"how":[107,130],"typical":[109,141],"pipeline":[110],"genomics":[112,144],"processing":[114],"can":[115],"accelerated,":[117],"modifications":[120],"required":[121],"exploit":[123],"architecture.":[126],"Furthermore,":[127],"demonstrate":[129],"isolated":[132],"evaluation":[133],"individual":[135],"tasks":[136],"misses":[137],"significant":[138],"overheads":[139],"pipelines":[142],"processing.":[146]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
