{"id":"https://openalex.org/W70596730","doi":"https://doi.org/10.1007/978-1-84996-474-6_12","title":"A Modular, Qualitative Modeling of Regulatory Networks Using Petri Nets","display_name":"A Modular, Qualitative Modeling of Regulatory Networks Using Petri Nets","publication_year":2010,"publication_date":"2010-10-21","ids":{"openalex":"https://openalex.org/W70596730","doi":"https://doi.org/10.1007/978-1-84996-474-6_12","mag":"70596730"},"language":"en","primary_location":{"id":"doi:10.1007/978-1-84996-474-6_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-1-84996-474-6_12","pdf_url":null,"source":{"id":"https://openalex.org/S4210239436","display_name":"Computational biology","issn_l":"1568-2684","issn":["1568-2684","2662-2432"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320108","host_organization_name":"Springer Nature (Netherlands)","host_organization_lineage":["https://openalex.org/P4310320108","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature (Netherlands)","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://hal.science/hal-02309999","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038231285","display_name":"Claudine Chaouiya","orcid":"https://orcid.org/0000-0003-2350-0756"},"institutions":[{"id":"https://openalex.org/I48057805","display_name":"Instituto Gulbenkian de Ci\u00eancia","ror":"https://ror.org/04b08hq31","country_code":"PT","type":"education","lineage":["https://openalex.org/I48057805"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Claudine Chaouiya","raw_affiliation_strings":["\u2002Instituto Gulbenkian de Ci\u00eancia, Oeiras"],"affiliations":[{"raw_affiliation_string":"\u2002Instituto Gulbenkian de Ci\u00eancia, Oeiras","institution_ids":["https://openalex.org/I48057805"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105893275","display_name":"Hanna Klaudel","orcid":null},"institutions":[{"id":"https://openalex.org/I4210107733","display_name":"Informatique, Biologie Int\u00e9grative et Syst\u00e8mes Complexes","ror":"https://ror.org/01aqxgr98","country_code":"FR","type":"facility","lineage":["https://openalex.org/I277688954","https://openalex.org/I277688954","https://openalex.org/I4210107733","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Hanna Klaudel","raw_affiliation_strings":["Informatique, Biologie Int\u00e9grative et Syst\u00e8mes Complexes"],"affiliations":[{"raw_affiliation_string":"Informatique, Biologie Int\u00e9grative et Syst\u00e8mes Complexes","institution_ids":["https://openalex.org/I4210107733"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069395164","display_name":"Franck Pommereau","orcid":"https://orcid.org/0000-0002-9959-3699"},"institutions":[{"id":"https://openalex.org/I4210107733","display_name":"Informatique, Biologie Int\u00e9grative et Syst\u00e8mes Complexes","ror":"https://ror.org/01aqxgr98","country_code":"FR","type":"facility","lineage":["https://openalex.org/I277688954","https://openalex.org/I277688954","https://openalex.org/I4210107733","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Franck Pommereau","raw_affiliation_strings":["Informatique, Biologie Int\u00e9grative et Syst\u00e8mes Complexes"],"affiliations":[{"raw_affiliation_string":"Informatique, Biologie Int\u00e9grative et Syst\u00e8mes Complexes","institution_ids":["https://openalex.org/I4210107733"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5038231285"],"corresponding_institution_ids":["https://openalex.org/I48057805"],"apc_list":null,"apc_paid":null,"fwci":3.8491,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.93016268,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"253","last_page":"279"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11195","display_name":"Simulation Techniques and Applications","score":0.9764999747276306,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10142","display_name":"Formal Methods in Verification","score":0.9675999879837036,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/petri-net","display_name":"Petri net","score":0.8458825349807739},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.7372296452522278},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7021821141242981},{"id":"https://openalex.org/keywords/formalism","display_name":"Formalism (music)","score":0.6399089694023132},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5230296850204468},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.48965126276016235},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.4624974727630615},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.44353240728378296},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2131437361240387}],"concepts":[{"id":"https://openalex.org/C38677869","wikidata":"https://www.wikidata.org/wiki/Q724168","display_name":"Petri net","level":2,"score":0.8458825349807739},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.7372296452522278},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7021821141242981},{"id":"https://openalex.org/C73301696","wikidata":"https://www.wikidata.org/wiki/Q5469984","display_name":"Formalism (music)","level":3,"score":0.6399089694023132},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5230296850204468},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.48965126276016235},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.4624974727630615},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.44353240728378296},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2131437361240387},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C558565934","wikidata":"https://www.wikidata.org/wiki/Q2743","display_name":"Musical","level":2,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-1-84996-474-6_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-1-84996-474-6_12","pdf_url":null,"source":{"id":"https://openalex.org/S4210239436","display_name":"Computational biology","issn_l":"1568-2684","issn":["1568-2684","2662-2432"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320108","host_organization_name":"Springer Nature (Netherlands)","host_organization_lineage":["https://openalex.org/P4310320108","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature (Netherlands)","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology","raw_type":"book-chapter"},{"id":"pmh:oai:HAL:hal-02309999v1","is_oa":true,"landing_page_url":"https://hal.science/hal-02309999","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Modeling in Systems Biology, pp.253-279, 2011, &#x27E8;10.1007/978-1-84996-474-6_12&#x27E9;","raw_type":"Book sections"}],"best_oa_location":{"id":"pmh:oai:HAL:hal-02309999v1","is_oa":true,"landing_page_url":"https://hal.science/hal-02309999","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Modeling in Systems Biology, pp.253-279, 2011, &#x27E8;10.1007/978-1-84996-474-6_12&#x27E9;","raw_type":"Book sections"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.46000000834465027}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":44,"referenced_works":["https://openalex.org/W72928827","https://openalex.org/W154417448","https://openalex.org/W1487395029","https://openalex.org/W1519328443","https://openalex.org/W1581408534","https://openalex.org/W1645305843","https://openalex.org/W1776634096","https://openalex.org/W1966071891","https://openalex.org/W1971224531","https://openalex.org/W1977624796","https://openalex.org/W1989284002","https://openalex.org/W2000163865","https://openalex.org/W2005486846","https://openalex.org/W2046538693","https://openalex.org/W2048013262","https://openalex.org/W2058221907","https://openalex.org/W2069697538","https://openalex.org/W2075269458","https://openalex.org/W2076935369","https://openalex.org/W2080267935","https://openalex.org/W2088488298","https://openalex.org/W2092755129","https://openalex.org/W2098932317","https://openalex.org/W2107536713","https://openalex.org/W2108654339","https://openalex.org/W2114518254","https://openalex.org/W2119138198","https://openalex.org/W2132935366","https://openalex.org/W2148357359","https://openalex.org/W2150281351","https://openalex.org/W2154633872","https://openalex.org/W2160145365","https://openalex.org/W2160196028","https://openalex.org/W2161636210","https://openalex.org/W2163461841","https://openalex.org/W2167155713","https://openalex.org/W2405638142","https://openalex.org/W2527065147","https://openalex.org/W2703818730","https://openalex.org/W2762210817","https://openalex.org/W3147043188","https://openalex.org/W4237425599","https://openalex.org/W4299438414","https://openalex.org/W4404342747"],"related_works":["https://openalex.org/W1551257573","https://openalex.org/W4230983483","https://openalex.org/W1980200158","https://openalex.org/W2154794415","https://openalex.org/W2132799268","https://openalex.org/W1538101305","https://openalex.org/W791317142","https://openalex.org/W2285033125","https://openalex.org/W2119655921","https://openalex.org/W1816071588"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
