{"id":"https://openalex.org/W4388455912","doi":"https://doi.org/10.1007/s44196-023-00348-w","title":"Spark-Based Label Diffusion and Label Selection Community Detection Algorithm for Metagenome Sequence Clustering","display_name":"Spark-Based Label Diffusion and Label Selection Community Detection Algorithm for Metagenome Sequence Clustering","publication_year":2023,"publication_date":"2023-11-07","ids":{"openalex":"https://openalex.org/W4388455912","doi":"https://doi.org/10.1007/s44196-023-00348-w"},"language":"en","primary_location":{"id":"doi:10.1007/s44196-023-00348-w","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s44196-023-00348-w","pdf_url":"https://link.springer.com/content/pdf/10.1007/s44196-023-00348-w.pdf","source":{"id":"https://openalex.org/S190680769","display_name":"International Journal of Computational Intelligence Systems","issn_l":"1875-6883","issn":["1875-6883","1875-6891"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computational Intelligence Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1007/s44196-023-00348-w.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025708683","display_name":"Zhengjiang Wu","orcid":"https://orcid.org/0000-0002-5965-4661"},"institutions":[{"id":"https://openalex.org/I4210166499","display_name":"Henan Polytechnic University","ror":"https://ror.org/05vr1c885","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210166499"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhengjiang Wu","raw_affiliation_strings":["College of Software, Henan Polytechnic University, No. 2001 Century Avenue, Jiaozuo, 454000, Henan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Software, Henan Polytechnic University, No. 2001 Century Avenue, Jiaozuo, 454000, Henan, China","institution_ids":["https://openalex.org/I4210166499"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103325936","display_name":"Xuyang Wu","orcid":"https://orcid.org/0009-0009-9995-8561"},"institutions":[{"id":"https://openalex.org/I4210166499","display_name":"Henan Polytechnic University","ror":"https://ror.org/05vr1c885","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210166499"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuyang Wu","raw_affiliation_strings":["College of Computer Science and Technology, Henan Polytechnic University, No. 2001 Century Avenue, Jiaozuo, 454000, Henan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Henan Polytechnic University, No. 2001 Century Avenue, Jiaozuo, 454000, Henan, China","institution_ids":["https://openalex.org/I4210166499"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016947324","display_name":"Junwei Luo","orcid":null},"institutions":[{"id":"https://openalex.org/I4210166499","display_name":"Henan Polytechnic University","ror":"https://ror.org/05vr1c885","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210166499"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Junwei Luo","raw_affiliation_strings":["College of Software, Henan Polytechnic University, No. 2001 Century Avenue, Jiaozuo, 454000, Henan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Software, Henan Polytechnic University, No. 2001 Century Avenue, Jiaozuo, 454000, Henan, China","institution_ids":["https://openalex.org/I4210166499"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5016947324"],"corresponding_institution_ids":["https://openalex.org/I4210166499"],"apc_list":{"value":2090,"currency":"USD","value_usd":2090},"apc_paid":{"value":2090,"currency":"USD","value_usd":2090},"fwci":0.0936,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.41806467,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"16","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/randomness","display_name":"Randomness","score":0.7619808912277222},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.7619638442993164},{"id":"https://openalex.org/keywords/jaccard-index","display_name":"Jaccard index","score":0.6624165177345276},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.6490985155105591},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.636634886264801},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5248351693153381},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.5146335363388062},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5120132565498352},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4358224868774414},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.26248663663864136},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.24935227632522583},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1365852653980255},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.1140708327293396}],"concepts":[{"id":"https://openalex.org/C125112378","wikidata":"https://www.wikidata.org/wiki/Q176640","display_name":"Randomness","level":2,"score":0.7619808912277222},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.7619638442993164},{"id":"https://openalex.org/C203519979","wikidata":"https://www.wikidata.org/wiki/Q865360","display_name":"Jaccard index","level":3,"score":0.6624165177345276},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.6490985155105591},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.636634886264801},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5248351693153381},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.5146335363388062},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5120132565498352},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4358224868774414},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.26248663663864136},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.24935227632522583},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1365852653980255},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.1140708327293396},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s44196-023-00348-w","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s44196-023-00348-w","pdf_url":"https://link.springer.com/content/pdf/10.1007/s44196-023-00348-w.pdf","source":{"id":"https://openalex.org/S190680769","display_name":"International Journal of Computational Intelligence Systems","issn_l":"1875-6883","issn":["1875-6883","1875-6891"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computational Intelligence Systems","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:fc6ea8a39f8a4167889919247022b4b9","is_oa":true,"landing_page_url":"https://doaj.org/article/fc6ea8a39f8a4167889919247022b4b9","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"International Journal of Computational Intelligence Systems, Vol 16, Iss 1, Pp 1-12 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1007/s44196-023-00348-w","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s44196-023-00348-w","pdf_url":"https://link.springer.com/content/pdf/10.1007/s44196-023-00348-w.pdf","source":{"id":"https://openalex.org/S190680769","display_name":"International Journal of Computational Intelligence Systems","issn_l":"1875-6883","issn":["1875-6883","1875-6891"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computational Intelligence Systems","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6221982799","display_name":null,"funder_award_id":"62372156","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G78415896","display_name":"\u57fa\u4e8e\u957f\u77ed\u8bfb\u6570\u7ed3\u5408\u7684\u7ed3\u6784\u53d8\u5f02\u68c0\u6d4b\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61972134","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321954","display_name":"Henan Polytechnic University","ror":"https://ror.org/05vr1c885"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4388455912.pdf"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W2037096232","https://openalex.org/W2131681506","https://openalex.org/W2132202037","https://openalex.org/W2138785419","https://openalex.org/W2995979568","https://openalex.org/W3008594856","https://openalex.org/W3013665047","https://openalex.org/W3013976177","https://openalex.org/W3037435467","https://openalex.org/W3041531047","https://openalex.org/W3099768174","https://openalex.org/W3103973800","https://openalex.org/W3120113354","https://openalex.org/W3155730749","https://openalex.org/W4210592306","https://openalex.org/W4225258284","https://openalex.org/W4225693658","https://openalex.org/W4316654307","https://openalex.org/W4321368590","https://openalex.org/W4322761889","https://openalex.org/W4323688027","https://openalex.org/W4376643762","https://openalex.org/W6600286444"],"related_works":["https://openalex.org/W4254879869","https://openalex.org/W3022576529","https://openalex.org/W2628526247","https://openalex.org/W2596401011","https://openalex.org/W2913569734","https://openalex.org/W4401519790","https://openalex.org/W2702570413","https://openalex.org/W2905361747","https://openalex.org/W2094688861","https://openalex.org/W1517613526"],"abstract_inverted_index":{"Abstract":[0],"It":[1],"is":[2,72,90,104,195],"a":[3,35,190],"challenge":[4],"to":[5,77,121,182,197],"assemble":[6],"an":[7,152],"enormous":[8],"amount":[9],"of":[10,45,58,88,125,143,176,186,201,217,230],"metagenome":[11,16,59,231],"data":[12],"in":[13,74,113,164,174],"metagenomics.":[14],"Usually,":[15],"cluster":[17,137],"sequence":[18,60,89,103,131,158,180,232],"before":[19],"assembly":[20],"accelerates":[21],"the":[22,43,49,56,75,86,94,107,110,123,129,140,157,161,165,184,199,215,221,228],"whole":[23],"process.":[24],"In":[25,83],"SpaRC,":[26],"sequences":[27,147],"are":[28,119],"defined":[29,91,105],"as":[30,106],"nodes":[31],"and":[32,54,66,98,138,179,224,226],"clustered":[33,202],"by":[34],"parallel":[36,50,63],"label":[37,46,64,67,126,132,142,154,159,172,177,187,218],"propagation":[38,173],"algorithm":[39,71,211],"(LPA).":[40],"To":[41],"address":[42],"randomness":[44,124,185,216],"selection":[47,68],"from":[48],"LPA":[51],"during":[52],"clustering":[53,81],"improve":[55,220],"completeness":[57,200],"clustering,":[61],"Spark-based":[62],"diffusion":[65],"community":[69],"detection":[70],"proposed":[73,210],"paper":[76],"obtain":[78],"more":[79],"accurate":[80],"results.":[82],"this":[84],"paper,":[85],"importance":[87,112,163,181],"based":[92],"on":[93],"Jaccard":[95],"similarity":[96],"coefficient":[97],"its":[99,114,135],"degree.":[100],"The":[101,204],"core":[102,130],"one":[108],"with":[109,160],"largest":[111],"located":[115,136],"community.":[116],"Three":[117],"strategies":[118],"formulated":[120],"reduce":[122,183,214,227],"selection.":[127,188],"Firstly,":[128],"diffuses":[133],"over":[134],"becomes":[139],"initial":[141,153],"other":[144],"sequences.":[145,167],"Those":[146],"that":[148,208],"do":[149],"not":[150],"receive":[151],"will":[155],"select":[156],"highest":[162],"neighbor":[166],"Secondly,":[168],"we":[169],"perform":[170],"improved":[171],"order":[175],"frequency":[178],"Finally,":[189],"merge":[191],"small":[192],"communities":[193],"step":[194],"added":[196],"increase":[198],"clusters.":[203],"experimental":[205],"results":[206],"show":[207],"our":[209],"can":[212],"effectively":[213],"selection,":[219],"purity,":[222],"completeness,":[223],"F-Measure":[225],"runtime":[229],"clustering.":[233]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
