{"id":"https://openalex.org/W4391350532","doi":"https://doi.org/10.1007/s44163-024-00103-w","title":"An overview of artificial intelligence in the field of genomics","display_name":"An overview of artificial intelligence in the field of genomics","publication_year":2024,"publication_date":"2024-01-30","ids":{"openalex":"https://openalex.org/W4391350532","doi":"https://doi.org/10.1007/s44163-024-00103-w"},"language":"en","primary_location":{"id":"doi:10.1007/s44163-024-00103-w","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s44163-024-00103-w","pdf_url":"https://link.springer.com/content/pdf/10.1007/s44163-024-00103-w.pdf","source":{"id":"https://openalex.org/S4210220416","display_name":"Discover Artificial Intelligence","issn_l":"2731-0809","issn":["2731-0809"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Discover Artificial Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1007/s44163-024-00103-w.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039001558","display_name":"Khizra Maqsood","orcid":null},"institutions":[{"id":"https://openalex.org/I110002522","display_name":"University of Essex","ror":"https://ror.org/02nkf1q06","country_code":"GB","type":"education","lineage":["https://openalex.org/I110002522"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Khizra Maqsood","raw_affiliation_strings":["The Computational Intelligence Centre, School of Computer Science and Electronic Engineering, University of Essex, Colchester, CO4 3SQ, UK"],"affiliations":[{"raw_affiliation_string":"The Computational Intelligence Centre, School of Computer Science and Electronic Engineering, University of Essex, Colchester, CO4 3SQ, UK","institution_ids":["https://openalex.org/I110002522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041176153","display_name":"Hani Hagras","orcid":"https://orcid.org/0000-0002-2818-5292"},"institutions":[{"id":"https://openalex.org/I110002522","display_name":"University of Essex","ror":"https://ror.org/02nkf1q06","country_code":"GB","type":"education","lineage":["https://openalex.org/I110002522"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Hani Hagras","raw_affiliation_strings":["The Computational Intelligence Centre, School of Computer Science and Electronic Engineering, University of Essex, Colchester, CO4 3SQ, UK"],"affiliations":[{"raw_affiliation_string":"The Computational Intelligence Centre, School of Computer Science and Electronic Engineering, University of Essex, Colchester, CO4 3SQ, UK","institution_ids":["https://openalex.org/I110002522"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055970718","display_name":"Nicolae Radu Zabet","orcid":"https://orcid.org/0000-0001-9964-6271"},"institutions":[{"id":"https://openalex.org/I166337079","display_name":"Queen Mary University of London","ror":"https://ror.org/026zzn846","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I166337079"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Nicolae Radu Zabet","raw_affiliation_strings":["Blizard Institute, Barts and The London School of Medicine and Dentistry, Queen Mary University of London, London, E1 2AT, UK"],"affiliations":[{"raw_affiliation_string":"Blizard Institute, Barts and The London School of Medicine and Dentistry, Queen Mary University of London, London, E1 2AT, UK","institution_ids":["https://openalex.org/I166337079"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5055970718"],"corresponding_institution_ids":["https://openalex.org/I166337079"],"apc_list":{"value":990,"currency":"EUR","value_usd":1067},"apc_paid":{"value":990,"currency":"EUR","value_usd":1067},"fwci":5.2497,"has_fulltext":true,"cited_by_count":23,"citation_normalized_percentile":{"value":0.9635881,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"4","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5250939130783081},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5087175965309143},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4672384560108185},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3718988597393036},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.19954082369804382},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.12376508116722107},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.07277518510818481},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.061519235372543335}],"concepts":[{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5250939130783081},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5087175965309143},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4672384560108185},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3718988597393036},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.19954082369804382},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.12376508116722107},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.07277518510818481},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.061519235372543335},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s44163-024-00103-w","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s44163-024-00103-w","pdf_url":"https://link.springer.com/content/pdf/10.1007/s44163-024-00103-w.pdf","source":{"id":"https://openalex.org/S4210220416","display_name":"Discover Artificial Intelligence","issn_l":"2731-0809","issn":["2731-0809"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Discover Artificial Intelligence","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:c530b2d3aadc4a958684f0e901db9c4c","is_oa":true,"landing_page_url":"https://doaj.org/article/c530b2d3aadc4a958684f0e901db9c4c","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Discover Artificial Intelligence, Vol 4, Iss 1, Pp 1-12 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1007/s44163-024-00103-w","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s44163-024-00103-w","pdf_url":"https://link.springer.com/content/pdf/10.1007/s44163-024-00103-w.pdf","source":{"id":"https://openalex.org/S4210220416","display_name":"Discover Artificial Intelligence","issn_l":"2731-0809","issn":["2731-0809"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Discover Artificial Intelligence","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4399999976158142,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320311061","display_name":"Queen Mary University of London","ror":"https://ror.org/026zzn846"},{"id":"https://openalex.org/F4320311731","display_name":"University of Essex","ror":"https://ror.org/02nkf1q06"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4391350532.pdf"},"referenced_works_count":47,"referenced_works":["https://openalex.org/W1787224781","https://openalex.org/W1971578941","https://openalex.org/W1981030303","https://openalex.org/W2015845481","https://openalex.org/W2016015848","https://openalex.org/W2035291205","https://openalex.org/W2075448280","https://openalex.org/W2077874719","https://openalex.org/W2095884976","https://openalex.org/W2109170403","https://openalex.org/W2127184458","https://openalex.org/W2137465688","https://openalex.org/W2143305386","https://openalex.org/W2152314234","https://openalex.org/W2209913965","https://openalex.org/W2214664963","https://openalex.org/W2342673283","https://openalex.org/W2546070262","https://openalex.org/W2619871835","https://openalex.org/W2735519414","https://openalex.org/W2755050428","https://openalex.org/W2887212924","https://openalex.org/W2895144199","https://openalex.org/W2901952863","https://openalex.org/W2921841818","https://openalex.org/W2950362518","https://openalex.org/W2987092090","https://openalex.org/W2999399991","https://openalex.org/W3040813705","https://openalex.org/W3042331443","https://openalex.org/W3046699218","https://openalex.org/W3046824470","https://openalex.org/W3081391674","https://openalex.org/W3091484480","https://openalex.org/W3098544719","https://openalex.org/W3182973519","https://openalex.org/W3183659087","https://openalex.org/W3185886596","https://openalex.org/W3213299611","https://openalex.org/W3216065183","https://openalex.org/W4214613336","https://openalex.org/W4220929385","https://openalex.org/W4220999759","https://openalex.org/W4287447409","https://openalex.org/W4366085876","https://openalex.org/W4385197384","https://openalex.org/W6925442604"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2350741829","https://openalex.org/W2530322880","https://openalex.org/W1596801655","https://openalex.org/W2359140296"],"abstract_inverted_index":{"Abstract":[0],"Artificial":[1,107],"intelligence":[2,63],"(AI)":[3],"is":[4],"revolutionizing":[5],"many":[6],"real-world":[7],"applications":[8],"in":[9,91,110,140,143],"various":[10],"domains.":[11],"In":[12],"the":[13,26,51,55,58,68,82,88,103,111,117,123],"field":[14,59,112],"of":[15,28,60,71,81,113,119,127,137],"genomics,":[16],"multiple":[17],"traditional":[18],"machine-learning":[19],"approaches":[20,32,38],"have":[21],"been":[22],"used":[23],"to":[24,49,54,66,77,87],"understand":[25],"dynamics":[27],"genetic":[29],"data.":[30],"These":[31],"provided":[33],"acceptable":[34],"predictions;":[35],"however,":[36],"these":[37],"are":[39,46],"based":[40],"on":[41],"opaque-box":[42],"AI":[43],"algorithms":[44],"which":[45],"not":[47],"able":[48],"provide":[50,78],"needed":[52],"transparency":[53,80],"community.":[56],"Recently,":[57],"explainable":[61],"artificial":[62],"has":[64],"emerged":[65],"overcome":[67],"interpretation":[69],"problem":[70],"opaque":[72],"box":[73],"models":[74],"by":[75],"aiming":[76],"complete":[79],"model":[83],"and":[84,115],"its":[85],"prediction":[86],"users":[89],"especially":[90],"sensitive":[92],"areas":[93],"such":[94],"as":[95],"healthcare,":[96],"finance,":[97],"or":[98],"security.":[99],"This":[100],"paper":[101],"highlights":[102],"need":[104],"for":[105],"eXplainable":[106],"Intelligence":[108],"(XAI)":[109],"genomics":[114],"how":[116],"understanding":[118],"genomic":[120],"regions,":[121],"specifically":[122],"non-coding":[124],"regulatory":[125],"region":[126],"genomes":[128],"(i.e.,":[129],"enhancers),":[130],"can":[131],"help":[132],"uncover":[133],"underlying":[134],"molecular":[135],"principles":[136],"disease":[138],"states,":[139],"particular":[141],"cancer":[142],"humans.":[144]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":8}],"updated_date":"2026-04-12T07:58:50.170612","created_date":"2025-10-10T00:00:00"}
