{"id":"https://openalex.org/W4415311928","doi":"https://doi.org/10.1007/s42514-025-00244-z","title":"ScalableAligner: a fast NGS mapping tool for shared-memory system","display_name":"ScalableAligner: a fast NGS mapping tool for shared-memory system","publication_year":2025,"publication_date":"2025-10-18","ids":{"openalex":"https://openalex.org/W4415311928","doi":"https://doi.org/10.1007/s42514-025-00244-z"},"language":"en","primary_location":{"id":"doi:10.1007/s42514-025-00244-z","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s42514-025-00244-z","pdf_url":null,"source":{"id":"https://openalex.org/S4210190911","display_name":"CCF Transactions on High Performance Computing","issn_l":"2524-4922","issn":["2524-4922","2524-4930"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"CCF Transactions on High Performance Computing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074459001","display_name":"Deyou Tang","orcid":"https://orcid.org/0000-0002-3796-3965"},"institutions":[{"id":"https://openalex.org/I90610280","display_name":"South China University of Technology","ror":"https://ror.org/0530pts50","country_code":"CN","type":"education","lineage":["https://openalex.org/I90610280"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Deyou Tang","raw_affiliation_strings":["School of Software Engineering, South China University of Technology, Guangzhou, 510006, China"],"raw_orcid":"https://orcid.org/0000-0002-3796-3965","affiliations":[{"raw_affiliation_string":"School of Software Engineering, South China University of Technology, Guangzhou, 510006, China","institution_ids":["https://openalex.org/I90610280"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Jialang Liang","orcid":null},"institutions":[{"id":"https://openalex.org/I90610280","display_name":"South China University of Technology","ror":"https://ror.org/0530pts50","country_code":"CN","type":"education","lineage":["https://openalex.org/I90610280"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jialang Liang","raw_affiliation_strings":["School of Software Engineering, South China University of Technology, Guangzhou, 510006, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Software Engineering, South China University of Technology, Guangzhou, 510006, China","institution_ids":["https://openalex.org/I90610280"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Pingjian Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I90610280","display_name":"South China University of Technology","ror":"https://ror.org/0530pts50","country_code":"CN","type":"education","lineage":["https://openalex.org/I90610280"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Pingjian Zhang","raw_affiliation_strings":["School of Software Engineering, South China University of Technology, Guangzhou, 510006, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Software Engineering, South China University of Technology, Guangzhou, 510006, China","institution_ids":["https://openalex.org/I90610280"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072335941","display_name":"Qing Deng","orcid":"https://orcid.org/0000-0001-5116-461X"},"institutions":[{"id":"https://openalex.org/I90610280","display_name":"South China University of Technology","ror":"https://ror.org/0530pts50","country_code":"CN","type":"education","lineage":["https://openalex.org/I90610280"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qingwen Deng","raw_affiliation_strings":["School of Software Engineering, South China University of Technology, Guangzhou, 510006, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Software Engineering, South China University of Technology, Guangzhou, 510006, China","institution_ids":["https://openalex.org/I90610280"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5074459001"],"corresponding_institution_ids":["https://openalex.org/I90610280"],"apc_list":{"value":2190,"currency":"EUR","value_usd":2790},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.31156812,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"7","issue":"6","first_page":"509","last_page":"522"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10054","display_name":"Parallel Computing and Optimization Techniques","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10054","display_name":"Parallel Computing and Optimization Techniques","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.6396999955177307},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4846999943256378},{"id":"https://openalex.org/keywords/asynchronous-communication","display_name":"Asynchronous communication","score":0.4596000015735626},{"id":"https://openalex.org/keywords/data-mapping","display_name":"Data mapping","score":0.43309998512268066},{"id":"https://openalex.org/keywords/hash-table","display_name":"Hash table","score":0.4169999957084656},{"id":"https://openalex.org/keywords/thread","display_name":"Thread (computing)","score":0.38449999690055847}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8112999796867371},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.6396999955177307},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4846999943256378},{"id":"https://openalex.org/C151319957","wikidata":"https://www.wikidata.org/wiki/Q752739","display_name":"Asynchronous communication","level":2,"score":0.4596000015735626},{"id":"https://openalex.org/C137314826","wikidata":"https://www.wikidata.org/wiki/Q2330408","display_name":"Data mapping","level":2,"score":0.43309998512268066},{"id":"https://openalex.org/C67388219","wikidata":"https://www.wikidata.org/wiki/Q207440","display_name":"Hash table","level":3,"score":0.4169999957084656},{"id":"https://openalex.org/C138101251","wikidata":"https://www.wikidata.org/wiki/Q213092","display_name":"Thread (computing)","level":2,"score":0.38449999690055847},{"id":"https://openalex.org/C99138194","wikidata":"https://www.wikidata.org/wiki/Q183427","display_name":"Hash function","level":2,"score":0.36239999532699585},{"id":"https://openalex.org/C68339613","wikidata":"https://www.wikidata.org/wiki/Q1549489","display_name":"Speedup","level":2,"score":0.35850000381469727},{"id":"https://openalex.org/C150202949","wikidata":"https://www.wikidata.org/wiki/Q107602","display_name":"Pointer (user interface)","level":2,"score":0.35109999775886536},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.34119999408721924},{"id":"https://openalex.org/C79403827","wikidata":"https://www.wikidata.org/wiki/Q3988","display_name":"Real-time computing","level":1,"score":0.3165000081062317},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.31029999256134033},{"id":"https://openalex.org/C202491316","wikidata":"https://www.wikidata.org/wiki/Q272683","display_name":"Instruction set","level":2,"score":0.2879999876022339},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.27709999680519104},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.2720000147819519},{"id":"https://openalex.org/C9390403","wikidata":"https://www.wikidata.org/wiki/Q3966","display_name":"Computer hardware","level":1,"score":0.2635999917984009}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s42514-025-00244-z","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s42514-025-00244-z","pdf_url":null,"source":{"id":"https://openalex.org/S4210190911","display_name":"CCF Transactions on High Performance Computing","issn_l":"2524-4922","issn":["2524-4922","2524-4930"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"CCF Transactions on High Performance Computing","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":33,"referenced_works":["https://openalex.org/W1996098588","https://openalex.org/W2013274550","https://openalex.org/W2027673257","https://openalex.org/W2068996722","https://openalex.org/W2087064593","https://openalex.org/W2102278945","https://openalex.org/W2103441770","https://openalex.org/W2105708056","https://openalex.org/W2110905563","https://openalex.org/W2124985265","https://openalex.org/W2153805608","https://openalex.org/W2154468535","https://openalex.org/W2156864100","https://openalex.org/W2159647614","https://openalex.org/W2162277333","https://openalex.org/W2170551349","https://openalex.org/W2526975281","https://openalex.org/W2604364312","https://openalex.org/W2727285297","https://openalex.org/W2785694006","https://openalex.org/W2789843538","https://openalex.org/W2952597168","https://openalex.org/W2964849163","https://openalex.org/W2995995746","https://openalex.org/W2999605442","https://openalex.org/W3033334618","https://openalex.org/W3129401806","https://openalex.org/W3163033414","https://openalex.org/W3172490830","https://openalex.org/W3193844559","https://openalex.org/W3216842221","https://openalex.org/W4210483144","https://openalex.org/W4247053599"],"related_works":[],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-12-17T22:08:43.090829","created_date":"2025-10-18T00:00:00"}
