{"id":"https://openalex.org/W2888446597","doi":"https://doi.org/10.1007/s41109-018-0091-2","title":"A spatially heterogeneous network-based metapopulation software model applied to the simulation of a pulmonary tuberculosis infection","display_name":"A spatially heterogeneous network-based metapopulation software model applied to the simulation of a pulmonary tuberculosis infection","publication_year":2018,"publication_date":"2018-08-23","ids":{"openalex":"https://openalex.org/W2888446597","doi":"https://doi.org/10.1007/s41109-018-0091-2","mag":"2888446597","pmid":"https://pubmed.ncbi.nlm.nih.gov/30839831"},"language":"en","primary_location":{"id":"doi:10.1007/s41109-018-0091-2","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s41109-018-0091-2","pdf_url":"https://appliednetsci.springeropen.com/counter/pdf/10.1007/s41109-018-0091-2","source":{"id":"https://openalex.org/S3035517252","display_name":"Applied Network Science","issn_l":"2364-8228","issn":["2364-8228"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Network Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://appliednetsci.springeropen.com/counter/pdf/10.1007/s41109-018-0091-2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079661445","display_name":"Michael J. Pitcher","orcid":"https://orcid.org/0000-0002-1935-2968"},"institutions":[{"id":"https://openalex.org/I16835326","display_name":"University of St Andrews","ror":"https://ror.org/02wn5qz54","country_code":"GB","type":"education","lineage":["https://openalex.org/I16835326"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Michael J. Pitcher","raw_affiliation_strings":["1School of Computer Science, University of St Andrews, North Haugh, St Andrews, UK","School of Computer Science, University of St Andrews, North Haugh, St Andrews, UK"],"raw_orcid":"https://orcid.org/0000-0002-1935-2968","affiliations":[{"raw_affiliation_string":"1School of Computer Science, University of St Andrews, North Haugh, St Andrews, UK","institution_ids":["https://openalex.org/I16835326"]},{"raw_affiliation_string":"School of Computer Science, University of St Andrews, North Haugh, St Andrews, UK","institution_ids":["https://openalex.org/I16835326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049185737","display_name":"Ruth Bowness","orcid":"https://orcid.org/0000-0002-4090-5168"},"institutions":[{"id":"https://openalex.org/I16835326","display_name":"University of St Andrews","ror":"https://ror.org/02wn5qz54","country_code":"GB","type":"education","lineage":["https://openalex.org/I16835326"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ruth Bowness","raw_affiliation_strings":["2School of Medicine, University of St Andrews, North Haugh, St Andrews, UK","School of Medicine, University of St Andrews, North Haugh, St Andrews, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2School of Medicine, University of St Andrews, North Haugh, St Andrews, UK","institution_ids":["https://openalex.org/I16835326"]},{"raw_affiliation_string":"School of Medicine, University of St Andrews, North Haugh, St Andrews, UK","institution_ids":["https://openalex.org/I16835326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079591803","display_name":"Simon Dobson","orcid":"https://orcid.org/0000-0001-9633-2103"},"institutions":[{"id":"https://openalex.org/I16835326","display_name":"University of St Andrews","ror":"https://ror.org/02wn5qz54","country_code":"GB","type":"education","lineage":["https://openalex.org/I16835326"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Simon Dobson","raw_affiliation_strings":["1School of Computer Science, University of St Andrews, North Haugh, St Andrews, UK","School of Computer Science, University of St Andrews, North Haugh, St Andrews, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1School of Computer Science, University of St Andrews, North Haugh, St Andrews, UK","institution_ids":["https://openalex.org/I16835326"]},{"raw_affiliation_string":"School of Computer Science, University of St Andrews, North Haugh, St Andrews, UK","institution_ids":["https://openalex.org/I16835326"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005030069","display_name":"Stephen H. Gillespie","orcid":"https://orcid.org/0000-0001-6537-7712"},"institutions":[{"id":"https://openalex.org/I16835326","display_name":"University of St Andrews","ror":"https://ror.org/02wn5qz54","country_code":"GB","type":"education","lineage":["https://openalex.org/I16835326"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Stephen H. Gillespie","raw_affiliation_strings":["2School of Medicine, University of St Andrews, North Haugh, St Andrews, UK","School of Medicine, University of St Andrews, North Haugh, St Andrews, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2School of Medicine, University of St Andrews, North Haugh, St Andrews, UK","institution_ids":["https://openalex.org/I16835326"]},{"raw_affiliation_string":"School of Medicine, University of St Andrews, North Haugh, St Andrews, UK","institution_ids":["https://openalex.org/I16835326"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I16835326"],"apc_list":{"value":790,"currency":"GBP","value_usd":969},"apc_paid":{"value":840,"currency":"EUR","value_usd":905},"fwci":1.14,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.77150598,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"3","issue":"1","first_page":"33","last_page":"33"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9761000275611877,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.9761000275611877,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10482","display_name":"Mathematical and Theoretical Epidemiology and Ecology Models","score":0.9050999879837036,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metapopulation","display_name":"Metapopulation","score":0.9028540253639221},{"id":"https://openalex.org/keywords/tuberculosis","display_name":"Tuberculosis","score":0.6346779465675354},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5907520055770874},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5206220149993896},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.5122715830802917},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.4915562570095062},{"id":"https://openalex.org/keywords/lung","display_name":"Lung","score":0.46925684809684753},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.3851797580718994},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3225935101509094},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.22527527809143066},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.20918181538581848},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12865978479385376},{"id":"https://openalex.org/keywords/biological-dispersal","display_name":"Biological dispersal","score":0.11296606063842773},{"id":"https://openalex.org/keywords/environmental-health","display_name":"Environmental health","score":0.11194944381713867}],"concepts":[{"id":"https://openalex.org/C189569837","wikidata":"https://www.wikidata.org/wiki/Q954495","display_name":"Metapopulation","level":4,"score":0.9028540253639221},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.6346779465675354},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5907520055770874},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5206220149993896},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.5122715830802917},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.4915562570095062},{"id":"https://openalex.org/C2777714996","wikidata":"https://www.wikidata.org/wiki/Q7886","display_name":"Lung","level":2,"score":0.46925684809684753},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.3851797580718994},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3225935101509094},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.22527527809143066},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.20918181538581848},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12865978479385376},{"id":"https://openalex.org/C47559259","wikidata":"https://www.wikidata.org/wiki/Q778143","display_name":"Biological dispersal","level":3,"score":0.11296606063842773},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.11194944381713867},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1007/s41109-018-0091-2","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s41109-018-0091-2","pdf_url":"https://appliednetsci.springeropen.com/counter/pdf/10.1007/s41109-018-0091-2","source":{"id":"https://openalex.org/S3035517252","display_name":"Applied Network Science","issn_l":"2364-8228","issn":["2364-8228"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Network Science","raw_type":"journal-article"},{"id":"pmid:30839831","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30839831","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied network science","raw_type":null},{"id":"pmh:oai:doaj.org/article:d79bebb504874a369ac529bd62d583d0","is_oa":false,"landing_page_url":"https://doaj.org/article/d79bebb504874a369ac529bd62d583d0","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Applied Network Science, Vol 3, Iss 1, Pp 1-21 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5176782","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6214320","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6214320","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6214320","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Appl Netw Sci","raw_type":"Text"},{"id":"pmh:oai:research-repository.st-andrews.ac.uk:10023/15886","is_oa":true,"landing_page_url":"https://hdl.handle.net/10023/15886","pdf_url":null,"source":{"id":"https://openalex.org/S4306400230","display_name":"St Andrews Research Repository (St Andrews Research Repository)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I16835326","host_organization_name":"University of St Andrews","host_organization_lineage":["https://openalex.org/I16835326"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal article"}],"best_oa_location":{"id":"doi:10.1007/s41109-018-0091-2","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s41109-018-0091-2","pdf_url":"https://appliednetsci.springeropen.com/counter/pdf/10.1007/s41109-018-0091-2","source":{"id":"https://openalex.org/S3035517252","display_name":"Applied Network Science","issn_l":"2364-8228","issn":["2364-8228"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Network Science","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.7900000214576721}],"awards":[{"id":"https://openalex.org/G289832492","display_name":"Model-based preclinical development of anti-tuberculosis drug combinations","funder_award_id":"115337","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G3829048491","display_name":null,"funder_award_id":"FP7/2007-2013","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5593277320","display_name":null,"funder_award_id":"2007-2013","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5702163051","display_name":null,"funder_award_id":"FP7/2007","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G7364720146","display_name":null,"funder_award_id":"FP7/2007-2013","funder_id":"https://openalex.org/F4320314178","funder_display_name":"European Federation of Pharmaceutical Industries and Associations"},{"id":"https://openalex.org/G8805859268","display_name":null,"funder_award_id":"MR/P014704/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"}],"funders":[{"id":"https://openalex.org/F4320314178","display_name":"European Federation of Pharmaceutical Industries and Associations","ror":"https://ror.org/00g1x4v36"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2888446597.pdf","grobid_xml":"https://content.openalex.org/works/W2888446597.grobid-xml"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W1414898727","https://openalex.org/W1607862065","https://openalex.org/W1799454977","https://openalex.org/W1810401193","https://openalex.org/W1826726928","https://openalex.org/W1846904639","https://openalex.org/W1929916688","https://openalex.org/W1965678855","https://openalex.org/W1967415740","https://openalex.org/W1973970154","https://openalex.org/W1981096151","https://openalex.org/W1988519891","https://openalex.org/W1998560900","https://openalex.org/W2003144529","https://openalex.org/W2005832207","https://openalex.org/W2006433225","https://openalex.org/W2007207860","https://openalex.org/W2008643985","https://openalex.org/W2019835759","https://openalex.org/W2023304660","https://openalex.org/W2029295802","https://openalex.org/W2034374036","https://openalex.org/W2034764513","https://openalex.org/W2034866848","https://openalex.org/W2036495910","https://openalex.org/W2042321087","https://openalex.org/W2045096944","https://openalex.org/W2046177867","https://openalex.org/W2056864555","https://openalex.org/W2062409682","https://openalex.org/W2067443873","https://openalex.org/W2096405961","https://openalex.org/W2127301185","https://openalex.org/W2133072591","https://openalex.org/W2134655561","https://openalex.org/W2138890315","https://openalex.org/W2141890333","https://openalex.org/W2143607548","https://openalex.org/W2143976580","https://openalex.org/W2152803686","https://openalex.org/W2229191546","https://openalex.org/W2297279602","https://openalex.org/W2400275435","https://openalex.org/W2515822818","https://openalex.org/W2618154116","https://openalex.org/W2781309084","https://openalex.org/W2951516897","https://openalex.org/W3103143917","https://openalex.org/W4230618174"],"related_works":["https://openalex.org/W2003194288","https://openalex.org/W2513589746","https://openalex.org/W2213189664","https://openalex.org/W2153919606","https://openalex.org/W2062254828","https://openalex.org/W4237480606","https://openalex.org/W2936968863","https://openalex.org/W1971792277","https://openalex.org/W4313128508","https://openalex.org/W2084707189"],"abstract_inverted_index":{"Tuberculosis":[0],"(TB)":[1],"is":[2,20,27,125,279],"an":[3,21],"ancient":[4],"disease":[5,68,221],"that,":[6],"although":[7],"curable,":[8],"still":[9],"accounts":[10],"for":[11,53,258],"over":[12,110],"1":[13],"million":[14],"deaths":[15],"worldwide.":[16],"Shortening":[17],"treatment":[18,76,80],"time":[19],"important":[22],"area":[23],"of":[24,32,39,49,60,120,130,146,159,164,167,173,185,212,234,246],"research":[25],"but":[26],"hampered":[28],"by":[29],"the":[30,36,51,64,72,111,147,157,162,165,168,171,182,210,215,227,240,243,247,252,293,304],"lack":[31],"models":[33],"that":[34,189,209,254,284],"mimic":[35],"full":[37],"range":[38],"human":[40,65],"pathology.":[41],"TB":[42,108,220,308],"shows":[43],"distinct":[44,191],"localisations":[45],"during":[46],"different":[47],"stages":[48],"infection,":[50],"reasons":[52],"which":[54,93,155,195,307,317],"are":[55,137,196,255,318],"poorly":[56],"understood.":[57],"Greater":[58],"understanding":[59],"how":[61],"heterogeneity":[62,101,193,213],"within":[63,134,214,292],"lung":[66,113,148,216,297],"influences":[67],"progression":[69,222],"may":[70],"hold":[71],"key":[73],"to":[74,105,139,204,261,270],"improving":[75],"efficiency":[77],"and":[78,102,114,122,136,144,170,237,242,265,295,311],"reducing":[79],"times.":[81],"In":[82,177],"this":[83,178],"work,":[84,179],"we":[85,180],"present":[86,198,276],"a":[87,95,107,128,186,231,271],"novel":[88],"in":[89,199,306],"silico":[90],"software":[91],"model":[92,188],"uses":[94],"networked":[96],"metapopulation":[97],"incorporating":[98,288],"both":[99],"spatial":[100,192],"dissemination":[103],"possibilities":[104],"simulate":[106],"infection":[109],"whole":[112],"associated":[115],"lymphatics.":[116],"The":[117],"entire":[118],"population":[119],"bacteria":[121,309],"immune":[123,267],"cells":[124],"split":[126],"into":[127,303],"network":[129,149],"patches:":[131],"members":[132,163,174],"interact":[133],"patches":[135,169],"able":[138],"move":[140],"between":[141,161,239],"them.":[142],"Patches":[143],"edges":[145],"include":[150],"their":[151],"own":[152],"environmental":[153,322],"attributes":[154],"influence":[156],"dynamics":[158],"interactions":[160],"subpopulations":[166],"translocation":[172],"along":[175],"edges.":[176],"detail":[181],"initial":[183],"findings":[184,282],"whole-organ":[187,286],"incorporates":[190],"features":[194],"not":[197],"standard":[200],"differential":[201,233],"equation":[202],"approaches":[203],"tuberculosis":[205],"modelling.":[206],"We":[207],"show":[208],"inclusion":[211],"landscape":[217],"when":[218],"modelling":[219,287],"has":[223],"significant":[224],"outcomes":[225],"on":[226],"bacterial":[228,274],"load":[229,275],"present:":[230],"greater":[232,272],"oxygen,":[235],"perfusion":[236],"ventilation":[238],"apices":[241],"basal":[244],"regions":[245],"lungs":[248],"creates":[249],"micro-environments":[250],"at":[251],"apex":[253],"more":[256,289,301],"preferential":[257],"bacteria,":[259],"due":[260],"increased":[262],"oxygen":[263],"availability":[264],"reduced":[266],"activity,":[268],"leading":[269],"overall":[273],"once":[277],"latency":[278],"established.":[280],"These":[281],"suggest":[283],"further":[285],"sophisticated":[290],"heterogeneities":[291],"environment":[294],"complex":[296],"topologies":[298],"will":[299],"provide":[300],"insight":[302],"environments":[305],"persist":[310],"thus":[312],"help":[313],"develop":[314],"new":[315],"treatments":[316],"factored":[319],"towards":[320],"these":[321],"conditions.":[323]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":1}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
