{"id":"https://openalex.org/W4416892828","doi":"https://doi.org/10.1007/s40747-025-02133-y","title":"Integrating histopathology and genomic data: a comparative study of fusion methods for breast cancer survival prediction","display_name":"Integrating histopathology and genomic data: a comparative study of fusion methods for breast cancer survival prediction","publication_year":2025,"publication_date":"2025-12-02","ids":{"openalex":"https://openalex.org/W4416892828","doi":"https://doi.org/10.1007/s40747-025-02133-y"},"language":"en","primary_location":{"id":"doi:10.1007/s40747-025-02133-y","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s40747-025-02133-y","pdf_url":"https://link.springer.com/content/pdf/10.1007/s40747-025-02133-y.pdf","source":{"id":"https://openalex.org/S3035462843","display_name":"Complex & Intelligent Systems","issn_l":"2198-6053","issn":["2198-6053","2199-4536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Complex &amp; Intelligent Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1007/s40747-025-02133-y.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015693826","display_name":"Younes Akbari","orcid":"https://orcid.org/0000-0001-7175-4326"},"institutions":[{"id":"https://openalex.org/I60342839","display_name":"Qatar University","ror":"https://ror.org/00yhnba62","country_code":"QA","type":"education","lineage":["https://openalex.org/I60342839"]}],"countries":["QA"],"is_corresponding":true,"raw_author_name":"Younes Akbari","raw_affiliation_strings":["Department of Computer Science and Engineering, Qatar University, Doha, Qatar"],"raw_orcid":"https://orcid.org/0000-0001-7175-4326","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Qatar University, Doha, Qatar","institution_ids":["https://openalex.org/I60342839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090739661","display_name":"Faseela Abdullakutty","orcid":"https://orcid.org/0000-0002-3084-0604"},"institutions":[{"id":"https://openalex.org/I60342839","display_name":"Qatar University","ror":"https://ror.org/00yhnba62","country_code":"QA","type":"education","lineage":["https://openalex.org/I60342839"]}],"countries":["QA"],"is_corresponding":false,"raw_author_name":"Faseela Abdullakutty","raw_affiliation_strings":["Department of Computer Science and Engineering, Qatar University, Doha, Qatar"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Qatar University, Doha, Qatar","institution_ids":["https://openalex.org/I60342839"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Somaya Al Maadeed","orcid":null},"institutions":[{"id":"https://openalex.org/I60342839","display_name":"Qatar University","ror":"https://ror.org/00yhnba62","country_code":"QA","type":"education","lineage":["https://openalex.org/I60342839"]}],"countries":["QA"],"is_corresponding":false,"raw_author_name":"Somaya Al Maadeed","raw_affiliation_strings":["Department of Computer Science and Engineering, Qatar University, Doha, Qatar"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Qatar University, Doha, Qatar","institution_ids":["https://openalex.org/I60342839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033623398","display_name":"Ahmed Bouridane","orcid":"https://orcid.org/0000-0002-1474-2772"},"institutions":[{"id":"https://openalex.org/I29891158","display_name":"University of Sharjah","ror":"https://ror.org/00engpz63","country_code":"AE","type":"education","lineage":["https://openalex.org/I29891158"]}],"countries":["AE"],"is_corresponding":false,"raw_author_name":"Ahmed Bouridane","raw_affiliation_strings":["BIMAI-Lab, Biomedically Informed Artificial Intelligence Laboratory, University of Sharjah, Sharjah, United Arab Emirates","Center for Data Analytics and Cybernetics, University of Sharjah, Sharjah, United Arab Emirates"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BIMAI-Lab, Biomedically Informed Artificial Intelligence Laboratory, University of Sharjah, Sharjah, United Arab Emirates","institution_ids":["https://openalex.org/I29891158"]},{"raw_affiliation_string":"Center for Data Analytics and Cybernetics, University of Sharjah, Sharjah, United Arab Emirates","institution_ids":["https://openalex.org/I29891158"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5046629044","display_name":"Rifat Hamoudi","orcid":"https://orcid.org/0000-0002-1402-0868"},"institutions":[{"id":"https://openalex.org/I29891158","display_name":"University of Sharjah","ror":"https://ror.org/00engpz63","country_code":"AE","type":"education","lineage":["https://openalex.org/I29891158"]}],"countries":["AE"],"is_corresponding":false,"raw_author_name":"Rifat Hamoudi","raw_affiliation_strings":["BIMAI-Lab, Biomedically Informed Artificial Intelligence Laboratory, University of Sharjah, Sharjah, United Arab Emirates","Clinical Sciences Department, College of Medicine, University of Sharjah, Sharjah, United Arab Emirates","Research Institute for Medical and Health Sciences, University of Sharjah, Sharjah, United Arab Emirates"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BIMAI-Lab, Biomedically Informed Artificial Intelligence Laboratory, University of Sharjah, Sharjah, United Arab Emirates","institution_ids":["https://openalex.org/I29891158"]},{"raw_affiliation_string":"Clinical Sciences Department, College of Medicine, University of Sharjah, Sharjah, United Arab Emirates","institution_ids":["https://openalex.org/I29891158"]},{"raw_affiliation_string":"Research Institute for Medical and Health Sciences, University of Sharjah, Sharjah, United Arab Emirates","institution_ids":["https://openalex.org/I29891158"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5015693826"],"corresponding_institution_ids":["https://openalex.org/I60342839"],"apc_list":{"value":2190,"currency":"USD","value_usd":2190},"apc_paid":{"value":2190,"currency":"USD","value_usd":2190},"fwci":2.5289,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.91288956,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":98},"biblio":{"volume":"12","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9589999914169312,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9589999914169312,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.011699999682605267,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10183","display_name":"Breast Cancer Treatment Studies","score":0.005400000140070915,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.67330002784729},{"id":"https://openalex.org/keywords/histopathology","display_name":"Histopathology","score":0.5338000059127808},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5031999945640564},{"id":"https://openalex.org/keywords/computational-intelligence","display_name":"Computational intelligence","score":0.48989999294281006},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4390999972820282},{"id":"https://openalex.org/keywords/fusion-gene","display_name":"Fusion gene","score":0.4368000030517578},{"id":"https://openalex.org/keywords/overall-survival","display_name":"Overall survival","score":0.4092999994754791},{"id":"https://openalex.org/keywords/survival-analysis","display_name":"Survival analysis","score":0.39079999923706055},{"id":"https://openalex.org/keywords/fusion","display_name":"Fusion","score":0.3700999915599823}],"concepts":[{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.67330002784729},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5950000286102295},{"id":"https://openalex.org/C544855455","wikidata":"https://www.wikidata.org/wiki/Q1070952","display_name":"Histopathology","level":2,"score":0.5338000059127808},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5031999945640564},{"id":"https://openalex.org/C139502532","wikidata":"https://www.wikidata.org/wiki/Q1122090","display_name":"Computational intelligence","level":2,"score":0.48989999294281006},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4390999972820282},{"id":"https://openalex.org/C111829193","wikidata":"https://www.wikidata.org/wiki/Q1108970","display_name":"Fusion gene","level":3,"score":0.4368000030517578},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43140000104904175},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.43059998750686646},{"id":"https://openalex.org/C3019894029","wikidata":"https://www.wikidata.org/wiki/Q332823","display_name":"Overall survival","level":2,"score":0.4092999994754791},{"id":"https://openalex.org/C10515644","wikidata":"https://www.wikidata.org/wiki/Q543310","display_name":"Survival analysis","level":2,"score":0.39079999923706055},{"id":"https://openalex.org/C158525013","wikidata":"https://www.wikidata.org/wiki/Q2593739","display_name":"Fusion","level":2,"score":0.3700999915599823},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3336000144481659},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.33160001039505005},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.32100000977516174},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.3125999867916107},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3102000057697296},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.3091000020503998},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.3037000000476837},{"id":"https://openalex.org/C33954974","wikidata":"https://www.wikidata.org/wiki/Q486494","display_name":"Sensor fusion","level":2,"score":0.2985000014305115},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.27379998564720154},{"id":"https://openalex.org/C3019822344","wikidata":"https://www.wikidata.org/wiki/Q1541222","display_name":"Tumor grade","level":3,"score":0.27059999108314514},{"id":"https://openalex.org/C152043487","wikidata":"https://www.wikidata.org/wiki/Q1229600","display_name":"Distributed File System","level":2,"score":0.27000001072883606},{"id":"https://openalex.org/C124942203","wikidata":"https://www.wikidata.org/wiki/Q656638","display_name":"Comparative genomic hybridization","level":4,"score":0.2639000117778778},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.25839999318122864},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.2581999897956848},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.25529998540878296},{"id":"https://openalex.org/C45804977","wikidata":"https://www.wikidata.org/wiki/Q7239673","display_name":"Predictive modelling","level":2,"score":0.25279998779296875},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.25110000371932983}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s40747-025-02133-y","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s40747-025-02133-y","pdf_url":"https://link.springer.com/content/pdf/10.1007/s40747-025-02133-y.pdf","source":{"id":"https://openalex.org/S3035462843","display_name":"Complex & Intelligent Systems","issn_l":"2198-6053","issn":["2198-6053","2199-4536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Complex &amp; Intelligent Systems","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:02d7abc139e2423f9c665040f2bc5bc7","is_oa":true,"landing_page_url":"https://doaj.org/article/02d7abc139e2423f9c665040f2bc5bc7","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Complex & Intelligent Systems, Vol 12, Iss 1, Pp 1-20 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1007/s40747-025-02133-y","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s40747-025-02133-y","pdf_url":"https://link.springer.com/content/pdf/10.1007/s40747-025-02133-y.pdf","source":{"id":"https://openalex.org/S3035462843","display_name":"Complex & Intelligent Systems","issn_l":"2198-6053","issn":["2198-6053","2199-4536"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Complex &amp; Intelligent Systems","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334468","display_name":"Qatar National Library","ror":"https://ror.org/02jv93662"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4416892828.pdf"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W2005895632","https://openalex.org/W2061554433","https://openalex.org/W2107554012","https://openalex.org/W2110065044","https://openalex.org/W2149199519","https://openalex.org/W2525157777","https://openalex.org/W2766845401","https://openalex.org/W2767330859","https://openalex.org/W2787890383","https://openalex.org/W2797883881","https://openalex.org/W2921485464","https://openalex.org/W2946165673","https://openalex.org/W2948141910","https://openalex.org/W2964051877","https://openalex.org/W2996092187","https://openalex.org/W3003269599","https://openalex.org/W3011821385","https://openalex.org/W3036901136","https://openalex.org/W3118914438","https://openalex.org/W3132646223","https://openalex.org/W3163991924","https://openalex.org/W3165439041","https://openalex.org/W3203898052","https://openalex.org/W4213164367","https://openalex.org/W4291021272","https://openalex.org/W4293652216","https://openalex.org/W4304014045","https://openalex.org/W4377234261","https://openalex.org/W4386010105","https://openalex.org/W4386462110","https://openalex.org/W4390971224","https://openalex.org/W4391256077","https://openalex.org/W4393033998","https://openalex.org/W4399039725","https://openalex.org/W4400102178","https://openalex.org/W4403003860","https://openalex.org/W4403832481","https://openalex.org/W4404915627","https://openalex.org/W4407246486","https://openalex.org/W4409263252","https://openalex.org/W4413867556"],"related_works":[],"abstract_inverted_index":{"Abstract":[0],"Accurate":[1],"breast":[2,98],"cancer":[3,99],"survival":[4,40,119],"prediction":[5],"using":[6,67],"multi-modal":[7,94],"data":[8,36],"is":[9],"vital":[10],"for":[11,37,97],"enhancing":[12,78],"clinical":[13],"decisions.":[14],"This":[15],"study":[16],"evaluates":[17],"deep":[18,50],"learning":[19,51,95],"based":[20],"fusion":[21,88,110],"strategies,":[22],"early,":[23],"intermediate,":[24],"late,":[25],"and":[26,34,53,61,70,84,123],"a":[27,44,113],"hybrid":[28],"approach,":[29],"to":[30,117],"integrate":[31],"histopathology":[32],"images":[33],"genomic":[35],"one":[38],"year":[39],"prediction.":[41,120],"We":[42],"developed":[43],"robust":[45],"evaluation":[46],"framework,":[47],"employing":[48],"tailored":[49],"architectures":[52],"metrics":[54],"including":[55],"accuracy,":[56],"precision,":[57],"recall,":[58],"F1":[59],"score,":[60],"AUC.":[62],"Model":[63],"performance":[64],"was":[65],"validated":[66],"Kaplan\u2013Meier":[68],"curves":[69],"log-rank":[71],"tests,":[72],"with":[73],"SHAP-based":[74],"feature":[75],"importance":[76,105],"analysis":[77],"interpretability.":[79],"Results":[80],"highlight":[81],"the":[82,104],"strengths":[83],"limitations":[85],"of":[86,106],"each":[87],"strategy,":[89],"offering":[90],"insights":[91],"into":[92],"optimal":[93],"approaches":[96],"prognosis.":[100],"Our":[101],"findings":[102],"underscore":[103],"selecting":[107],"task":[108],"specific":[109],"methods,":[111],"providing":[112],"reproducible,":[114],"interpretable":[115],"framework":[116],"advance":[118],"All":[121],"code":[122],"configurations":[124],"are":[125],"publicly":[126],"available.":[127]},"counts_by_year":[{"year":2026,"cited_by_count":2}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-12-02T00:00:00"}
