{"id":"https://openalex.org/W2900545131","doi":"https://doi.org/10.1007/s40484-018-0153-6","title":"On the statistical significance of protein complex","display_name":"On the statistical significance of protein complex","publication_year":2018,"publication_date":"2018-11-20","ids":{"openalex":"https://openalex.org/W2900545131","doi":"https://doi.org/10.1007/s40484-018-0153-6","mag":"2900545131"},"language":"en","primary_location":{"id":"doi:10.1007/s40484-018-0153-6","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s40484-018-0153-6","pdf_url":"https://link.springer.com/content/pdf/10.1007/s40484-018-0153-6.pdf","source":{"id":"https://openalex.org/S4210172333","display_name":"Quantitative Biology","issn_l":"2095-4689","issn":["2095-4689","2095-4697"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://link.springer.com/content/pdf/10.1007/s40484-018-0153-6.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036699886","display_name":"Youfu Su","orcid":null},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Youfu Su","raw_affiliation_strings":["<!--1--> School of Software Dalian University of Technology Dalian 116024 China","School of Software Dalian University of Technology Dalian 116024 China"],"affiliations":[{"raw_affiliation_string":"<!--1--> School of Software Dalian University of Technology Dalian 116024 China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"School of Software Dalian University of Technology Dalian 116024 China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070998415","display_name":"Can Zhao","orcid":"https://orcid.org/0000-0001-7286-3452"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Can Zhao","raw_affiliation_strings":["<!--1--> School of Software Dalian University of Technology Dalian 116024 China","School of Software Dalian University of Technology Dalian 116024 China"],"affiliations":[{"raw_affiliation_string":"<!--1--> School of Software Dalian University of Technology Dalian 116024 China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"School of Software Dalian University of Technology Dalian 116024 China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100370662","display_name":"Zheng Chen","orcid":"https://orcid.org/0000-0002-3505-0396"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zheng Chen","raw_affiliation_strings":["<!--1--> School of Software Dalian University of Technology Dalian 116024 China","School of Software Dalian University of Technology Dalian 116024 China"],"affiliations":[{"raw_affiliation_string":"<!--1--> School of Software Dalian University of Technology Dalian 116024 China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"School of Software Dalian University of Technology Dalian 116024 China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101610890","display_name":"Bo Tian","orcid":"https://orcid.org/0000-0002-9722-2528"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bo Tian","raw_affiliation_strings":["<!--1--> School of Software Dalian University of Technology Dalian 116024 China","School of Software Dalian University of Technology Dalian 116024 China"],"affiliations":[{"raw_affiliation_string":"<!--1--> School of Software Dalian University of Technology Dalian 116024 China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"School of Software Dalian University of Technology Dalian 116024 China","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009588567","display_name":"Zengyou He","orcid":"https://orcid.org/0000-0001-9526-8816"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zengyou He","raw_affiliation_strings":["<!--1--> School of Software Dalian University of Technology Dalian 116024 China","<!--2--> Key Laboratory for Ubiquitous Network and Service Software of Liaoning Dalian 116024 China","School of Software Dalian University of Technology Dalian 116024 China","Key Laboratory for Ubiquitous Network and Service Software of Liaoning Dalian 116024 China"],"affiliations":[{"raw_affiliation_string":"<!--1--> School of Software Dalian University of Technology Dalian 116024 China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"<!--2--> Key Laboratory for Ubiquitous Network and Service Software of Liaoning Dalian 116024 China","institution_ids":[]},{"raw_affiliation_string":"School of Software Dalian University of Technology Dalian 116024 China","institution_ids":[]},{"raw_affiliation_string":"Key Laboratory for Ubiquitous Network and Service Software of Liaoning Dalian 116024 China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5036699886"],"corresponding_institution_ids":["https://openalex.org/I27357992"],"apc_list":null,"apc_paid":null,"fwci":0.4635,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.64111764,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"6","issue":"4","first_page":"313","last_page":"320"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9904999732971191,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9889000058174133,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/null-hypothesis","display_name":"Null hypothesis","score":0.7708230018615723},{"id":"https://openalex.org/keywords/null","display_name":"Null (SQL)","score":0.7323219776153564},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.7096550464630127},{"id":"https://openalex.org/keywords/statistical-hypothesis-testing","display_name":"Statistical hypothesis testing","score":0.6765164136886597},{"id":"https://openalex.org/keywords/p-value","display_name":"p-value","score":0.6403896808624268},{"id":"https://openalex.org/keywords/null-model","display_name":"Null model","score":0.5574573874473572},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5207483768463135},{"id":"https://openalex.org/keywords/value","display_name":"Value (mathematics)","score":0.5176251530647278},{"id":"https://openalex.org/keywords/statistical-significance","display_name":"Statistical significance","score":0.48777157068252563},{"id":"https://openalex.org/keywords/measure","display_name":"Measure (data warehouse)","score":0.41088879108428955},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.40939998626708984},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.39503344893455505},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35284745693206787},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.346566379070282},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3112044334411621},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.2784236669540405},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.09092089533805847}],"concepts":[{"id":"https://openalex.org/C191988596","wikidata":"https://www.wikidata.org/wiki/Q628374","display_name":"Null hypothesis","level":2,"score":0.7708230018615723},{"id":"https://openalex.org/C203763787","wikidata":"https://www.wikidata.org/wiki/Q371029","display_name":"Null (SQL)","level":2,"score":0.7323219776153564},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.7096550464630127},{"id":"https://openalex.org/C87007009","wikidata":"https://www.wikidata.org/wiki/Q210832","display_name":"Statistical hypothesis testing","level":2,"score":0.6765164136886597},{"id":"https://openalex.org/C44036329","wikidata":"https://www.wikidata.org/wiki/Q253255","display_name":"p-value","level":3,"score":0.6403896808624268},{"id":"https://openalex.org/C36382193","wikidata":"https://www.wikidata.org/wiki/Q7068966","display_name":"Null model","level":2,"score":0.5574573874473572},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5207483768463135},{"id":"https://openalex.org/C2776291640","wikidata":"https://www.wikidata.org/wiki/Q2912517","display_name":"Value (mathematics)","level":2,"score":0.5176251530647278},{"id":"https://openalex.org/C65409693","wikidata":"https://www.wikidata.org/wiki/Q425265","display_name":"Statistical significance","level":2,"score":0.48777157068252563},{"id":"https://openalex.org/C2780009758","wikidata":"https://www.wikidata.org/wiki/Q6804172","display_name":"Measure (data warehouse)","level":2,"score":0.41088879108428955},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.40939998626708984},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.39503344893455505},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35284745693206787},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.346566379070282},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3112044334411621},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.2784236669540405},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.09092089533805847},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/s40484-018-0153-6","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s40484-018-0153-6","pdf_url":"https://link.springer.com/content/pdf/10.1007/s40484-018-0153-6.pdf","source":{"id":"https://openalex.org/S4210172333","display_name":"Quantitative Biology","issn_l":"2095-4689","issn":["2095-4689","2095-4697"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Biology","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1007/s40484-018-0153-6","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s40484-018-0153-6","pdf_url":"https://link.springer.com/content/pdf/10.1007/s40484-018-0153-6.pdf","source":{"id":"https://openalex.org/S4210172333","display_name":"Quantitative Biology","issn_l":"2095-4689","issn":["2095-4689","2095-4697"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Quantitative Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4399999976158142,"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2"}],"awards":[{"id":"https://openalex.org/G1264312442","display_name":null,"funder_award_id":"DUT14QY07","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2376276132","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G306606422","display_name":null,"funder_award_id":"61572094","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3366835791","display_name":null,"funder_award_id":"No. 61572094","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G374016007","display_name":null,"funder_award_id":"2017T","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4759418660","display_name":null,"funder_award_id":"DUT2017TB02","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7110810602","display_name":null,"funder_award_id":"61572094","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G7194242126","display_name":null,"funder_award_id":"DUT2017TB0","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2900545131.pdf","grobid_xml":"https://content.openalex.org/works/W2900545131.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W229097380","https://openalex.org/W1783384641","https://openalex.org/W1970301364","https://openalex.org/W1973247012","https://openalex.org/W1978690156","https://openalex.org/W1987139164","https://openalex.org/W1987363726","https://openalex.org/W2007448777","https://openalex.org/W2050721857","https://openalex.org/W2065304353","https://openalex.org/W2082565035","https://openalex.org/W2087070363","https://openalex.org/W2116117181","https://openalex.org/W2116447934","https://openalex.org/W2128343754","https://openalex.org/W2146046001","https://openalex.org/W2152495216","https://openalex.org/W2156028561","https://openalex.org/W2158266097","https://openalex.org/W2163485494","https://openalex.org/W2164928285","https://openalex.org/W2165533101","https://openalex.org/W2166344835","https://openalex.org/W2236623899","https://openalex.org/W2254563062","https://openalex.org/W2595741287","https://openalex.org/W2621160082","https://openalex.org/W2963455014"],"related_works":["https://openalex.org/W2979681497","https://openalex.org/W1962532029","https://openalex.org/W4239137652","https://openalex.org/W3003558595","https://openalex.org/W2369782938","https://openalex.org/W2964785812","https://openalex.org/W2285660206","https://openalex.org/W1986870412","https://openalex.org/W1978135938","https://openalex.org/W2977181302"],"abstract_inverted_index":{"Background":[0],"Statistical":[1],"validation":[2],"of":[3,22,28,70,86,127,165],"predicted":[4,24,72,130],"complexes":[5],"is":[6,16,77,80,154],"a":[7,46,62,71,104,110,128],"fundamental":[8],"issue":[9,33],"in":[10,26,39,88,94],"proteomics":[11],"and":[12,92],"bioinformatics.":[13],"The":[14,74,147],"target":[15,89],"to":[17,122,142,156],"measure":[18],"the":[19,40,67,84,95,124,157,162],"statistical":[20,163],"significance":[21,164],"each":[23],"complex":[25,91,107],"terms":[27],"p":[29,68,125],"\u2010values.":[30],"Surprisingly,":[31],"this":[32,54,58,115],"has":[34],"not":[35],"received":[36],"much":[37],"attention":[38],"literature.":[41],"To":[42],"our":[43,135,152],"knowledge,":[44],"only":[45],"few":[47],"research":[48],"efforts":[49],"have":[50],"been":[51],"made":[52],"towards":[53],"direction.":[55],"Methods":[56],"In":[57,99],"article,":[59],"we":[60,101,118],"propose":[61],"novel":[63],"method":[64,136,153],"for":[65],"calculating":[66],"\u2010value":[69,126],"complex.":[73,131],"null":[75,97,116],"hypothesis":[76],"that":[78,93,103,151],"there":[79],"no":[81],"difference":[82],"between":[83],"number":[85],"edges":[87],"protein":[90,106,167],"random":[96],"model.":[98],"addition,":[100],"assume":[102],"true":[105],"must":[108],"be":[109],"connected":[111],"subgraph.":[112],"Based":[113],"on":[114,137,160],"hypothesis,":[117],"present":[119],"an":[120],"algorithm":[121],"compute":[123],"given":[129],"Results":[132],"We":[133],"test":[134],"five":[138],"benchmark":[139],"data":[140],"sets":[141],"evaluate":[143],"its":[144],"effectiveness.":[145],"Conclusions":[146],"experimental":[148],"results":[149],"show":[150],"superior":[155],"state\u2010of\u2010the\u2010art":[158],"algorithms":[159],"assessing":[161],"candidate":[166],"complexes.":[168]},"counts_by_year":[{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-03-18T14:38:29.013473","created_date":"2025-10-10T00:00:00"}
